RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 SPRP35270 261 aaPredicted RBP4.34□□□□□ -1.72
TRAPPC11-208ENST00000511955 RAB8AP61006 207 aa4.34□□□□□ -1.72
TRAPPC11-208ENST00000511955 PKIAP61925 76 aa4.34□□□□□ -1.72
TRAPPC11-208ENST00000511955 PPP1R1AQ13522 171 aa4.34□□□□□ -1.72
TRAPPC11-208ENST00000511955 RSU1Q15404 277 aa4.34□□□□□ -1.72
TRAPPC11-208ENST00000511955 PLPPR5Q32ZL2 321 aa4.34□□□□□ -1.72
TRAPPC11-208ENST00000511955 TMEM268Q5VZI3 342 aa4.34□□□□□ -1.72
TRAPPC11-208ENST00000511955 VASNQ6EMK4 673 aa4.34□□□□□ -1.72
TRAPPC11-208ENST00000511955 TEPPQ6URK8 271 aa4.34□□□□□ -1.72
TRAPPC11-208ENST00000511955 Q6ZT83 130 aa4.34□□□□□ -1.72
TRAPPC11-208ENST00000511955 CLEC14AQ86T13 490 aa4.34□□□□□ -1.72
TRAPPC11-208ENST00000511955 MUC15Q8N387 334 aa4.34□□□□□ -1.72
TRAPPC11-208ENST00000511955 C9orf62Q8N4C0 152 aa4.34□□□□□ -1.72
TRAPPC11-208ENST00000511955 YIPF7Q8N8F6 280 aa4.34□□□□□ -1.72
TRAPPC11-208ENST00000511955 DMBX1Q8NFW5 382 aa4.34□□□□□ -1.72
TRAPPC11-208ENST00000511955 NPRL2Q8WTW4 380 aa4.34□□□□□ -1.72
TRAPPC11-208ENST00000511955 SKA2Q8WVK7 121 aaPredicted RBP4.34□□□□□ -1.72
TRAPPC11-208ENST00000511955 RAB3CQ96E17 227 aa4.34□□□□□ -1.72
TRAPPC11-208ENST00000511955 SDSLQ96GA7 329 aa4.34□□□□□ -1.72
TRAPPC11-208ENST00000511955 SIGLEC10Q96LC7 697 aa4.34□□□□□ -1.72
TRAPPC11-208ENST00000511955 C20orf173Q96LM9 149 aa4.34□□□□□ -1.72
TRAPPC11-208ENST00000511955 HYLS1Q96M11 299 aa4.34□□□□□ -1.72
TRAPPC11-208ENST00000511955 DUX3Q96PT4 197 aa4.34□□□□□ -1.72
TRAPPC11-208ENST00000511955 NEDD4LQ96PU5 975 aa4.34□□□□□ -1.72
TRAPPC11-208ENST00000511955 OR2M4Q96R27 311 aa4.34□□□□□ -1.72
TRAPPC11-208ENST00000511955 NXF2Q9GZY0 626 aaKnown RBP4.34□□□□□ -1.72
TRAPPC11-208ENST00000511955 NOX4Q9NPH5 578 aa4.34□□□□□ -1.72
TRAPPC11-208ENST00000511955 VPS29Q9UBQ0 182 aa4.34□□□□□ -1.72
TRAPPC11-208ENST00000511955 NUFIP1Q9UHK0 495 aaKnown RBP4.34□□□□□ -1.72
TRAPPC11-208ENST00000511955 JPT1Q9UK76 154 aa4.34□□□□□ -1.72
TRAPPC11-208ENST00000511955 SSR3Q9UNL2 185 aa4.34□□□□□ -1.72
TRAPPC11-208ENST00000511955 YLPM1P49750 1951 aaKnown RBP4.34□□□□□ -1.72
TRAPPC11-208ENST00000511955 CACNA1AO00555 2505 aa4.34□□□□□ -1.72
TRAPPC11-208ENST00000511955 A0A096LPI6 279 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 A0A0A6YYD5 115 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 C20orf202A1L168 122 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 FAM157AC9JC47 383 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 K7ERU9 68 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 SLC17A3O00476 420 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 ALOX12BO75342 701 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 CATP04040 527 aaKnown RBP4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 ALPLP05186 524 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 HOXB4P17483 251 aaPredicted RBP4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 PGCP20142 388 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 SPINK2P20155 84 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 SULT1A1P50225 295 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 SULT1A2P50226 295 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 CLRN1P58418 232 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 TBPL1P62380 186 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 RAP1AP62834 184 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 HSF1Q00613 529 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 GTF2H2Q13888 395 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 ELOCQ15369 112 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 TRIP6Q15654 476 aaKnown RBP4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 CTF1Q16619 201 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 VMACQ2NL98 169 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 TTLL9Q3SXZ7 439 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 PYCR3Q53H96 274 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 GTF2H2CQ6P1K8 395 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 TRMT10BQ6PF06 316 aaKnown RBP4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 TMEM64Q6YI46 380 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 C10orf107Q8IVU9 208 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 KLHDC8BQ8IXV7 354 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 LINC01561Q8N1V8 128 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 GDPD1Q8N9F7 314 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 OR52B6Q8NGF0 335 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 OR6K6Q8NGW6 343 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 DCAKDQ8WVC6 231 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 RGP1Q92546 391 aaPredicted RBP4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 TOMM40LQ969M1 308 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 COX14Q96I36 57 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 OR5B12Q96R08 314 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 DUSP23Q9BVJ7 150 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 RSPO3Q9BXY4 272 aaPredicted RBP4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 METTL17Q9H7H0 456 aaPredicted RBP4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 Q9H8V8 135 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 HINT3Q9NQE9 182 aaKnown RBP4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 TAAR2Q9P1P5 351 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 B3GAT1Q9P2W7 334 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 ADAM29Q9UKF5 820 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 STUB1Q9UNE7 303 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 PRSS21Q9Y6M0 314 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 PCDH15Q96QU1 1955 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 ZCWPW2A0A1B0GU75 182 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 EXOC1LA0A1B0GW35 172 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 MSTNO14793 375 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 SLC16A7O60669 478 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 GGCTO75223 188 aaKnown RBP4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 TRAPPC6AO75865 159 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 CSF3P09919 207 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 TFPIP10646 304 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 ZNF17P17021 662 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 ACRV1P26436 265 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 RPL12P30050 165 aaKnown RBP4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 OR3A4PP47883 348 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 SELENOTP62341 195 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 RPL31P62899 125 aaKnown RBP4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 ATXN7L3Q14CW9 347 aaPredicted RBP4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 C4orf26Q17RF5 130 aa4.33□□□□□ -1.72
TRAPPC11-208ENST00000511955 SYTL3Q4VX76 610 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms