RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 KIR2DS1A0A191URI9 304 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 PNMA8CA0A1B0GUJ8 204 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 RFPL4AA6NLU0 287 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 RFPL4AL1F8VTS6 287 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 GPR37O15354 613 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 SIGLEC5O15389 551 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 ENSAO43768 121 aaKnown RBP5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 ECDO95905 644 aaPredicted RBP5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 PLATP00750 562 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 AVPP01185 164 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 CD1AP06126 327 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 LIPFP07098 398 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 HCKP08631 526 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 PSG2P11465 335 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 ZNF182P17025 639 aaPredicted RBP5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 CELP19835 753 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 AMY2BP19961 511 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 RAB3AP20336 220 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 PRDX2P32119 198 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 ERVK11-1P61568 191 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 VBP1P61758 197 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 IL13RA1P78552 427 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 BDH1Q02338 343 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 PAX2Q02962 417 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 PAX8Q06710 450 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 ACSM1Q08AH1 577 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 PDZK1IP1Q13113 114 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 IKZF1Q13422 519 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 SPCS2Q15005 226 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 YIF1BQ5BJH7 314 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 LRRC10Q5BKY1 277 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 ZNF788Q6ZQV5 615 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 C1orf229Q6ZS94 237 aaPredicted RBP5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 USP43Q70EL4 1123 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 BTN2A1Q7KYR7 527 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 Q8IYB0 196 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 FAM216BQ8N7L0 139 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 ZFP41Q8N8Y5 198 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 NANPQ8TBE9 248 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 ST8SIA4Q92187 359 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 RGP1Q92546 391 aaPredicted RBP5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 UFD1Q92890 307 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 TMEM106AQ96A25 262 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 SLAMF9Q96A28 289 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 CPNE2Q96FN4 548 aaPredicted RBP5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 PGLYRP3Q96LB9 341 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 CEP19Q96LK0 163 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 ZNF488Q96MN9 340 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 NUDT16L1Q9BRJ7 211 aaKnown RBP5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 CHCHD6Q9BRQ6 235 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 HES4Q9HCC6 221 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 SMURF1Q9HCE7 757 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 EXOSC4Q9NPD3 245 aaKnown RBP5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 NDUFB11Q9NX14 153 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 MTCH1Q9NZJ7 389 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 OPN4Q9UHM6 478 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 METRNQ9UJH8 293 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 STUB1Q9UNE7 303 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 AUP1Q9Y679 476 aa5.94□□□□□ -1.46
PDLIM5-215ENST00000511586 SONP18583 2426 aaKnown RBP5.93□□□□□ -1.46
PDLIM5-215ENST00000511586 ABCA2Q9BZC7 2435 aa5.93□□□□□ -1.46
PDLIM5-215ENST00000511586 TRBV5-5A0A0J9YX44 114 aa5.93□□□□□ -1.46
PDLIM5-215ENST00000511586 A0A1B0GW55 424 aa5.93□□□□□ -1.46
PDLIM5-215ENST00000511586 C22orf46C9J442 243 aa5.93□□□□□ -1.46
PDLIM5-215ENST00000511586 FCN3O75636 299 aa5.93□□□□□ -1.46
PDLIM5-215ENST00000511586 CLPXO76031 633 aa5.93□□□□□ -1.46
PDLIM5-215ENST00000511586 KNG1P01042 644 aa5.93□□□□□ -1.46
PDLIM5-215ENST00000511586 TFF1P04155 84 aa5.93□□□□□ -1.46
PDLIM5-215ENST00000511586 ALDOBP05062 364 aa5.93□□□□□ -1.46
PDLIM5-215ENST00000511586 DUX4L2P0CJ85 424 aa5.93□□□□□ -1.46
PDLIM5-215ENST00000511586 DUX4L3P0CJ86 424 aa5.93□□□□□ -1.46
PDLIM5-215ENST00000511586 DUX4L4P0CJ87 422 aa5.93□□□□□ -1.46
PDLIM5-215ENST00000511586 DUX4L5P0CJ88 424 aa5.93□□□□□ -1.46
PDLIM5-215ENST00000511586 DUX4L6P0CJ89 424 aa5.93□□□□□ -1.46
PDLIM5-215ENST00000511586 DUX4L7P0CJ90 424 aa5.93□□□□□ -1.46
PDLIM5-215ENST00000511586 PPIAL4GP0DN37 164 aa5.93□□□□□ -1.46
PDLIM5-215ENST00000511586 TMEM225BP0DP42 221 aa5.93□□□□□ -1.46
PDLIM5-215ENST00000511586 CPEP16870 476 aa5.93□□□□□ -1.46
PDLIM5-215ENST00000511586 PSMA1P25786 263 aaKnown RBP5.93□□□□□ -1.46
PDLIM5-215ENST00000511586 POU3F4P49335 361 aa5.93□□□□□ -1.46
PDLIM5-215ENST00000511586 CAV3P56539 151 aa5.93□□□□□ -1.46
PDLIM5-215ENST00000511586 NCS1P62166 190 aa5.93□□□□□ -1.46
PDLIM5-215ENST00000511586 RPS11P62280 158 aaKnown RBP eCLIP5.93□□□□□ -1.46
PDLIM5-215ENST00000511586 PPP3R1P63098 170 aa5.93□□□□□ -1.46
PDLIM5-215ENST00000511586 SCGB2A2Q13296 93 aa5.93□□□□□ -1.46
PDLIM5-215ENST00000511586 DYNC1I2Q13409 638 aaKnown RBP5.93□□□□□ -1.46
PDLIM5-215ENST00000511586 KISS1Q15726 138 aa5.93□□□□□ -1.46
PDLIM5-215ENST00000511586 SSX1Q16384 188 aa5.93□□□□□ -1.46
PDLIM5-215ENST00000511586 DGUOKQ16854 277 aa5.93□□□□□ -1.46
PDLIM5-215ENST00000511586 Q499Y3 187 aa5.93□□□□□ -1.46
PDLIM5-215ENST00000511586 LIPKQ5VXJ0 399 aa5.93□□□□□ -1.46
PDLIM5-215ENST00000511586 ZNF529Q6P280 563 aa5.93□□□□□ -1.46
PDLIM5-215ENST00000511586 DUX4L9Q6RFH8 374 aaPredicted RBP5.93□□□□□ -1.46
PDLIM5-215ENST00000511586 FIP1L1Q6UN15 594 aaKnown RBP5.93□□□□□ -1.46
PDLIM5-215ENST00000511586 C1QL2Q7Z5L3 287 aa5.93□□□□□ -1.46
PDLIM5-215ENST00000511586 PRIMA1Q86XR5 153 aa5.93□□□□□ -1.46
PDLIM5-215ENST00000511586 SAXO1Q8IYX7 474 aa5.93□□□□□ -1.46
PDLIM5-215ENST00000511586 BATF2Q8N1L9 274 aa5.93□□□□□ -1.46
PDLIM5-215ENST00000511586 ZNF561Q8N587 486 aa5.93□□□□□ -1.46
PDLIM5-215ENST00000511586 PNLDC1Q8NA58 520 aaKnown RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms