RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 IGHV1-18A0A0C4DH31 117 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 IGHV1-69-2A0A0G2JMI3 117 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 LOC100131303A0A0U1RQF7 123 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 LOC285095A0A1B0GVY8 99 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 SNTNA6NMZ2 147 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 H3BMQ9 156 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 POLR2DO15514 142 aaKnown RBP2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 LYPLA1O75608 230 aaPredicted RBP2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 AIFM1O95831 613 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 KRT6AP02538 564 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 OPN1SWP03999 348 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 SEMG1P04279 462 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 CALB1P05937 261 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 SERPINA2P20848 420 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 ME2P23368 584 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 ANP32AP39687 249 aaKnown RBP2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 KIR2DS2P43631 304 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 CCT3P49368 545 aaKnown RBP2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 PRPS1P60891 318 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 HMGCS1Q01581 520 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 PLCXD2Q0VAA5 305 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 CDH17Q12864 832 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 GABRA6Q16445 453 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 LRRC36Q1X8D7 754 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 C6orf226Q5I0X4 101 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 AADACL4Q5VUY2 407 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 HBMQ6B0K9 141 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 DCUN1D2Q6PH85 259 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 FRA10AC1Q70Z53 315 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 CENPQQ7L2Z9 268 aaPredicted RBP2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 ZNF100Q8IYN0 542 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 SPICQ8N5J4 248 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 COMMD1Q8N668 190 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 OR5M1Q8NGP8 315 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 HGDQ93099 445 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 CPNE4Q96A23 557 aaPredicted RBP2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 TSNARE1Q96NA8 513 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 RBM14Q96PK6 669 aaKnown RBP2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 OR5B2Q96R09 309 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 ZNF184Q99676 751 aaPredicted RBP2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 BCL7BQ9BQE9 202 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 ZNF670Q9BS34 389 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 CHRDL1Q9BU40 450 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 PARD6BQ9BYG5 372 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 PCBD2Q9H0N5 130 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 EHD1Q9H4M9 534 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 PTGES2Q9H7Z7 377 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 RAB18Q9NP72 206 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 NANSQ9NR45 359 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 SLC17A5Q9NRA2 495 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 EXD2Q9NVH0 621 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 SLC2A8Q9NY64 477 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 ONECUT1Q9UBC0 465 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 ZNF221Q9UK13 617 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 CFAP45Q9UL16 551 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 IFT52Q9Y366 437 aa2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 TSSC4Q9Y5U2 329 aaPredicted RBP2.43□□□□□ -2.02
TOPBP1-208ENST00000511439 VPS13DQ5THJ4 4388 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 IGHV2-70DA0A0C4DH43 119 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 A0A0G2JLM5 398 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 TRIM49D1C9J1S8 452 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 FCN1O00602 326 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 TAPBPO15533 448 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 TIMM8AO60220 97 aaPredicted RBP2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 IGF2P01344 180 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 CATP04040 527 aaKnown RBP2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 FBP1P09467 338 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 PNMA6AP0CW24 399 aaPredicted RBP2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 VDAC1P21796 283 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 LAP3P28838 519 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 MIPP30301 263 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 CRYBB2P43320 205 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 OR3A4PP47883 348 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 KLK7P49862 253 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 ZNF140P52738 457 aaPredicted RBP2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 SEC61GP60059 68 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 FGF12P61328 243 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 BTN3A2P78410 334 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 EWSR1Q01844 656 aaKnown RBP eCLIP2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 TGFBR3Q03167 851 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 LRRC63Q05C16 580 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 MAB21L1Q13394 359 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 PAFAH1B3Q15102 231 aaKnown RBP2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 AANATQ16613 207 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 HSP90B2PQ58FF3 399 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 Q5VSD8 79 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 FBXW9Q5XUX1 488 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 NCBP2-AS2Q69YL0 99 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 CYHR1Q6ZMK1 362 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 RNF165Q6ZSG1 346 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 CCDC121Q6ZUS5 278 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 UTS2BQ765I0 119 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 CALHM3Q86XJ0 350 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 TMEM123Q8N131 208 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 C14orf178Q8N769 122 aaPredicted RBP2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 WDR31Q8NA23 367 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 OR13C4Q8NGS5 318 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 KCNG3Q8TAE7 436 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 FAM81AQ8TBF8 368 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 ANKRD7Q92527 254 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms