RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 EGFL6Q8IUX8 553 aa14.6□□□□□ -0.07
TPM3-220ENST00000509601 ENTHD1Q8IYW4 607 aa14.6□□□□□ -0.07
TPM3-220ENST00000509601 ACBD7Q8N6N7 88 aa14.6□□□□□ -0.07
TPM3-220ENST00000509601 DNAAF1Q8NEP3 725 aa14.6□□□□□ -0.07
TPM3-220ENST00000509601 PP6455Q8WZ26 134 aa14.6□□□□□ -0.07
TPM3-220ENST00000509601 FGGYQ96C11 551 aa14.6□□□□□ -0.07
TPM3-220ENST00000509601 BORCS8Q96FH0 119 aa14.6□□□□□ -0.07
TPM3-220ENST00000509601 C16orf95Q9H693 158 aa14.6□□□□□ -0.07
TPM3-220ENST00000509601 VPREB3Q9UKI3 123 aa14.6□□□□□ -0.07
TPM3-220ENST00000509601 RNF114Q9Y508 228 aa14.6□□□□□ -0.07
TPM3-220ENST00000509601 GMPPBQ9Y5P6 360 aa14.6□□□□□ -0.07
TPM3-220ENST00000509601 TMEM82A0PJX8 343 aa14.59□□□□□ -0.07
TPM3-220ENST00000509601 C17orf98A8MV24 154 aa14.59□□□□□ -0.07
TPM3-220ENST00000509601 J3QLW9 94 aa14.59□□□□□ -0.07
TPM3-220ENST00000509601 ANGPTL7O43827 346 aa14.59□□□□□ -0.07
TPM3-220ENST00000509601 TSPAN9O75954 239 aa14.59□□□□□ -0.07
TPM3-220ENST00000509601 CLPXO76031 633 aa14.59□□□□□ -0.07
TPM3-220ENST00000509601 PAHP00439 452 aa14.59□□□□□ -0.07
TPM3-220ENST00000509601 ZNF19P17023 458 aa14.59□□□□□ -0.07
TPM3-220ENST00000509601 ATF1P18846 271 aa14.59□□□□□ -0.07
TPM3-220ENST00000509601 PAX6P26367 422 aa14.59□□□□□ -0.07
TPM3-220ENST00000509601 NPBWR2P48146 333 aa14.59□□□□□ -0.07
TPM3-220ENST00000509601 PROK1P58294 105 aa14.59□□□□□ -0.07
TPM3-220ENST00000509601 C17orf107Q6ZR85 190 aa14.59□□□□□ -0.07
TPM3-220ENST00000509601 UTS2BQ765I0 119 aa14.59□□□□□ -0.07
TPM3-220ENST00000509601 RNF144BQ7Z419 303 aa14.59□□□□□ -0.07
TPM3-220ENST00000509601 LHFPL3Q86UP9 236 aa14.59□□□□□ -0.07
TPM3-220ENST00000509601 C10orf67Q8IYJ2 551 aa14.59□□□□□ -0.07
TPM3-220ENST00000509601 OR10AC1Q8NH08 325 aa14.59□□□□□ -0.07
TPM3-220ENST00000509601 PELI1Q96FA3 418 aa14.59□□□□□ -0.07
TPM3-220ENST00000509601 HEXA-AS1Q9H8Q6 139 aa14.59□□□□□ -0.07
TPM3-220ENST00000509601 SEBOXQ9HB31 216 aaPredicted RBP14.59□□□□□ -0.07
TPM3-220ENST00000509601 MYRFQ9Y2G1 1151 aa14.59□□□□□ -0.07
TPM3-220ENST00000509601 MEGF8Q7Z7M0 2845 aa14.58□□□□□ -0.08
TPM3-220ENST00000509601 DSCAML1Q8TD84 2053 aa14.58□□□□□ -0.08
TPM3-220ENST00000509601 A0A1W2PPH5 198 aa14.58□□□□□ -0.08
TPM3-220ENST00000509601 OR4C45A6NMZ5 311 aa14.58□□□□□ -0.08
TPM3-220ENST00000509601 HTR1AP08908 422 aa14.58□□□□□ -0.08
TPM3-220ENST00000509601 RBP2P50120 134 aa14.58□□□□□ -0.08
TPM3-220ENST00000509601 ATP1B3P54709 279 aa14.58□□□□□ -0.08
TPM3-220ENST00000509601 CNN3Q15417 329 aaKnown RBP14.58□□□□□ -0.08
TPM3-220ENST00000509601 TREML4Q6UXN2 200 aa14.58□□□□□ -0.08
TPM3-220ENST00000509601 OR51A4Q8NGJ6 313 aa14.58□□□□□ -0.08
TPM3-220ENST00000509601 OR5R1Q8NH85 324 aa14.58□□□□□ -0.08
TPM3-220ENST00000509601 C4orf36Q96KX1 117 aa14.58□□□□□ -0.08
TPM3-220ENST00000509601 SNX22Q96L94 193 aa14.58□□□□□ -0.08
TPM3-220ENST00000509601 SSX3Q99909 188 aa14.58□□□□□ -0.08
TPM3-220ENST00000509601 C9orf16Q9BUW7 83 aa14.58□□□□□ -0.08
TPM3-220ENST00000509601 AMBNQ9NP70 447 aa14.58□□□□□ -0.08
TPM3-220ENST00000509601 IL36RNQ9UBH0 155 aa14.58□□□□□ -0.08
TPM3-220ENST00000509601 VWFP04275 2813 aa14.57□□□□□ -0.08
TPM3-220ENST00000509601 LOC100130705A0A1B0GUX0 176 aa14.57□□□□□ -0.08
TPM3-220ENST00000509601 FAM90A8PA6NJQ4 464 aa14.57□□□□□ -0.08
TPM3-220ENST00000509601 SNTNA6NMZ2 147 aa14.57□□□□□ -0.08
TPM3-220ENST00000509601 DBTP11182 482 aaKnown RBP14.57□□□□□ -0.08
TPM3-220ENST00000509601 PIPP12273 146 aaPredicted RBP14.57□□□□□ -0.08
TPM3-220ENST00000509601 TGFBR2P37173 567 aa14.57□□□□□ -0.08
TPM3-220ENST00000509601 MTCP1P56278 107 aa14.57□□□□□ -0.08
TPM3-220ENST00000509601 ZNF91Q05481 1191 aa14.57□□□□□ -0.08
TPM3-220ENST00000509601 ALKBH1Q13686 389 aaKnown RBP14.57□□□□□ -0.08
TPM3-220ENST00000509601 GALEQ14376 348 aa14.57□□□□□ -0.08
TPM3-220ENST00000509601 SLC35E4Q6ICL7 350 aa14.57□□□□□ -0.08
TPM3-220ENST00000509601 CRIP3Q6Q6R5 217 aa14.57□□□□□ -0.08
TPM3-220ENST00000509601 ZBTB49Q6ZSB9 765 aa14.57□□□□□ -0.08
TPM3-220ENST00000509601 ASCC1Q8N9N2 400 aaKnown RBP14.57□□□□□ -0.08
TPM3-220ENST00000509601 OR52N4Q8NGI2 321 aa14.57□□□□□ -0.08
TPM3-220ENST00000509601 PIFOQ8TCI5 191 aa14.57□□□□□ -0.08
TPM3-220ENST00000509601 ISG20L2Q9H9L3 353 aaKnown RBP14.57□□□□□ -0.08
TPM3-220ENST00000509601 FAM118AQ9NWS6 357 aa14.57□□□□□ -0.08
TPM3-220ENST00000509601 MEX3AA1L020 520 aaKnown RBP14.56□□□□□ -0.08
TPM3-220ENST00000509601 MEGF11A6BM72 1044 aa14.56□□□□□ -0.08
TPM3-220ENST00000509601 BTBD17A6NE02 478 aa14.56□□□□□ -0.08
TPM3-220ENST00000509601 H3BUX3 64 aa14.56□□□□□ -0.08
TPM3-220ENST00000509601 IGHA1P01876 353 aa14.56□□□□□ -0.08
TPM3-220ENST00000509601 BCL3P20749 454 aa14.56□□□□□ -0.08
TPM3-220ENST00000509601 PRKACBP22694 351 aa14.56□□□□□ -0.08
TPM3-220ENST00000509601 AZGP1P25311 298 aaKnown RBP14.56□□□□□ -0.08
TPM3-220ENST00000509601 BMXP51813 675 aa14.56□□□□□ -0.08
TPM3-220ENST00000509601 PDZK1IP1Q13113 114 aa14.56□□□□□ -0.08
TPM3-220ENST00000509601 DHRS7BQ6IAN0 325 aaPredicted RBP14.56□□□□□ -0.08
TPM3-220ENST00000509601 ZNF782Q6ZMW2 699 aaPredicted RBP14.56□□□□□ -0.08
TPM3-220ENST00000509601 PQLC1Q8N2U9 271 aa14.56□□□□□ -0.08
TPM3-220ENST00000509601 PPP1R35Q8TAP8 253 aa14.56□□□□□ -0.08
TPM3-220ENST00000509601 APH1BQ8WW43 257 aa14.56□□□□□ -0.08
TPM3-220ENST00000509601 EMG1Q92979 244 aaKnown RBP14.56□□□□□ -0.08
TPM3-220ENST00000509601 ALG8Q9BVK2 526 aa14.56□□□□□ -0.08
TPM3-220ENST00000509601 MRPS18AQ9NVS2 196 aaKnown RBP14.56□□□□□ -0.08
TPM3-220ENST00000509601 RBFOX1Q9NWB1 397 aaKnown RBP14.56□□□□□ -0.08
TPM3-220ENST00000509601 HHLA2Q9UM44 414 aa14.56□□□□□ -0.08
TPM3-220ENST00000509601 IGKV1-12A0A0C4DH73 117 aa14.55□□□□□ -0.08
TPM3-220ENST00000509601 hCG_1809904A0A1W2PP81 198 aa14.55□□□□□ -0.08
TPM3-220ENST00000509601 A0A1W2PPE2 198 aa14.55□□□□□ -0.08
TPM3-220ENST00000509601 A0A1W2PR64 198 aa14.55□□□□□ -0.08
TPM3-220ENST00000509601 A0A1W2PRV1 198 aa14.55□□□□□ -0.08
TPM3-220ENST00000509601 E9PI62 339 aa14.55□□□□□ -0.08
TPM3-220ENST00000509601 EBAG9O00559 213 aa14.55□□□□□ -0.08
TPM3-220ENST00000509601 WIPF1O43516 503 aa14.55□□□□□ -0.08
TPM3-220ENST00000509601 MPZL2O60487 215 aa14.55□□□□□ -0.08
TPM3-220ENST00000509601 PSPNO60542 156 aa14.55□□□□□ -0.08
TPM3-220ENST00000509601 HAND1O96004 215 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms