RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 MYRFQ9Y2G1 1151 aa12.1□□□□□ -0.47
UBE2D3-228ENST00000508974 DSCAML1Q8TD84 2053 aa12.09□□□□□ -0.47
UBE2D3-228ENST00000508974 IGKV1-9A0A0C4DH69 117 aa12.09□□□□□ -0.47
UBE2D3-228ENST00000508974 BTBD17A6NE02 478 aa12.09□□□□□ -0.47
UBE2D3-228ENST00000508974 SNTNA6NMZ2 147 aa12.09□□□□□ -0.47
UBE2D3-228ENST00000508974 POM121CA8CG34 1229 aa12.09□□□□□ -0.47
UBE2D3-228ENST00000508974 OCM2P0CE71 109 aa12.09□□□□□ -0.47
UBE2D3-228ENST00000508974 OCMP0CE72 109 aaPredicted RBP12.09□□□□□ -0.47
UBE2D3-228ENST00000508974 GABRB1P18505 474 aa12.09□□□□□ -0.47
UBE2D3-228ENST00000508974 AZGP1P25311 298 aaKnown RBP12.09□□□□□ -0.47
UBE2D3-228ENST00000508974 EDDM3BP56851 147 aa12.09□□□□□ -0.47
UBE2D3-228ENST00000508974 C17orf107Q6ZR85 190 aa12.09□□□□□ -0.47
UBE2D3-228ENST00000508974 C1orf122Q6ZSJ8 110 aa12.09□□□□□ -0.47
UBE2D3-228ENST00000508974 KCTD20Q7Z5Y7 419 aa12.09□□□□□ -0.47
UBE2D3-228ENST00000508974 EGFL6Q8IUX8 553 aa12.09□□□□□ -0.47
UBE2D3-228ENST00000508974 ZNF676Q8N7Q3 588 aa12.09□□□□□ -0.47
UBE2D3-228ENST00000508974 OR5D13Q8NGL4 314 aa12.09□□□□□ -0.47
UBE2D3-228ENST00000508974 OR13C3Q8NGS6 347 aa12.09□□□□□ -0.47
UBE2D3-228ENST00000508974 PP6455Q8WZ26 134 aa12.09□□□□□ -0.47
UBE2D3-228ENST00000508974 PELI1Q96FA3 418 aa12.09□□□□□ -0.47
UBE2D3-228ENST00000508974 SPACA5Q96QH8 159 aa12.09□□□□□ -0.47
UBE2D3-228ENST00000508974 ALG8Q9BVK2 526 aa12.09□□□□□ -0.47
UBE2D3-228ENST00000508974 LOC100130705A0A1B0GUX0 176 aa12.08□□□□□ -0.48
UBE2D3-228ENST00000508974 A0A1W2PPH5 198 aa12.08□□□□□ -0.48
UBE2D3-228ENST00000508974 BCL3P20749 454 aa12.08□□□□□ -0.48
UBE2D3-228ENST00000508974 DUSP1P28562 367 aa12.08□□□□□ -0.48
UBE2D3-228ENST00000508974 NPBWR2P48146 333 aa12.08□□□□□ -0.48
UBE2D3-228ENST00000508974 RBP2P50120 134 aa12.08□□□□□ -0.48
UBE2D3-228ENST00000508974 BMXP51813 675 aa12.08□□□□□ -0.48
UBE2D3-228ENST00000508974 ATP1B3P54709 279 aa12.08□□□□□ -0.48
UBE2D3-228ENST00000508974 MTCP1P56278 107 aa12.08□□□□□ -0.48
UBE2D3-228ENST00000508974 ACTA2P62736 377 aa12.08□□□□□ -0.48
UBE2D3-228ENST00000508974 ACTG2P63267 376 aa12.08□□□□□ -0.48
UBE2D3-228ENST00000508974 EDDM3AQ14507 147 aa12.08□□□□□ -0.48
UBE2D3-228ENST00000508974 OLFML2AQ68BL7 652 aa12.08□□□□□ -0.48
UBE2D3-228ENST00000508974 RNF144BQ7Z419 303 aa12.08□□□□□ -0.48
UBE2D3-228ENST00000508974 CCDC54Q8NEL0 328 aa12.08□□□□□ -0.48
UBE2D3-228ENST00000508974 OR13C9Q8NGT0 318 aa12.08□□□□□ -0.48
UBE2D3-228ENST00000508974 WFDC12Q8WWY7 111 aa12.08□□□□□ -0.48
UBE2D3-228ENST00000508974 CHST6Q9GZX3 395 aa12.08□□□□□ -0.48
UBE2D3-228ENST00000508974 RBFOX1Q9NWB1 397 aaKnown RBP12.08□□□□□ -0.48
UBE2D3-228ENST00000508974 FAM118AQ9NWS6 357 aa12.08□□□□□ -0.48
UBE2D3-228ENST00000508974 VPREB3Q9UKI3 123 aa12.08□□□□□ -0.48
UBE2D3-228ENST00000508974 SF3B6Q9Y3B4 125 aaKnown RBP12.08□□□□□ -0.48
UBE2D3-228ENST00000508974 CLPSL1A2RUU4 121 aa12.07□□□□□ -0.48
UBE2D3-228ENST00000508974 H3BUX3 64 aa12.07□□□□□ -0.48
UBE2D3-228ENST00000508974 K7N7A8 449 aa12.07□□□□□ -0.48
UBE2D3-228ENST00000508974 NDUFA7O95182 113 aa12.07□□□□□ -0.48
UBE2D3-228ENST00000508974 ISG15P05161 165 aa12.07□□□□□ -0.48
UBE2D3-228ENST00000508974 ATF1P18846 271 aa12.07□□□□□ -0.48
UBE2D3-228ENST00000508974 ACSM1Q08AH1 577 aa12.07□□□□□ -0.48
UBE2D3-228ENST00000508974 ALKBH1Q13686 389 aaKnown RBP12.07□□□□□ -0.48
UBE2D3-228ENST00000508974 GALEQ14376 348 aa12.07□□□□□ -0.48
UBE2D3-228ENST00000508974 LY6EQ16553 131 aa12.07□□□□□ -0.48
UBE2D3-228ENST00000508974 DHRS7BQ6IAN0 325 aaPredicted RBP12.07□□□□□ -0.48
UBE2D3-228ENST00000508974 FDX2Q6P4F2 183 aa12.07□□□□□ -0.48
UBE2D3-228ENST00000508974 BRICD5Q6PL45 260 aa12.07□□□□□ -0.48
UBE2D3-228ENST00000508974 GDPGP1Q6ZNW5 385 aa12.07□□□□□ -0.48
UBE2D3-228ENST00000508974 GDPD3Q7L5L3 318 aa12.07□□□□□ -0.48
UBE2D3-228ENST00000508974 TPRX1Q8N7U7 411 aa12.07□□□□□ -0.48
UBE2D3-228ENST00000508974 OR5D18Q8NGL1 313 aa12.07□□□□□ -0.48
UBE2D3-228ENST00000508974 RHOXF1Q8NHV9 184 aa12.07□□□□□ -0.48
UBE2D3-228ENST00000508974 STMN2Q93045 179 aa12.07□□□□□ -0.48
UBE2D3-228ENST00000508974 C10orf35Q96D05 121 aa12.07□□□□□ -0.48
UBE2D3-228ENST00000508974 Q96MT0 163 aa12.07□□□□□ -0.48
UBE2D3-228ENST00000508974 HHLA2Q9UM44 414 aa12.07□□□□□ -0.48
UBE2D3-228ENST00000508974 RNF114Q9Y508 228 aa12.07□□□□□ -0.48
UBE2D3-228ENST00000508974 MMP24Q9Y5R2 645 aa12.07□□□□□ -0.48
UBE2D3-228ENST00000508974 TMEM82A0PJX8 343 aa12.06□□□□□ -0.48
UBE2D3-228ENST00000508974 OR4C45A6NMZ5 311 aa12.06□□□□□ -0.48
UBE2D3-228ENST00000508974 E9PI62 339 aa12.06□□□□□ -0.48
UBE2D3-228ENST00000508974 MPZL2O60487 215 aa12.06□□□□□ -0.48
UBE2D3-228ENST00000508974 ZNF737O75373 536 aa12.06□□□□□ -0.48
UBE2D3-228ENST00000508974 FADS2O95864 444 aaKnown RBP12.06□□□□□ -0.48
UBE2D3-228ENST00000508974 HAND1O96004 215 aa12.06□□□□□ -0.48
UBE2D3-228ENST00000508974 CYB5AP00167 134 aa12.06□□□□□ -0.48
UBE2D3-228ENST00000508974 IGHA1P01876 353 aa12.06□□□□□ -0.48
UBE2D3-228ENST00000508974 CHRM2P08172 466 aa12.06□□□□□ -0.48
UBE2D3-228ENST00000508974 PRKACAP17612 351 aa12.06□□□□□ -0.48
UBE2D3-228ENST00000508974 GABRR1P24046 479 aa12.06□□□□□ -0.48
UBE2D3-228ENST00000508974 CCR9P51686 369 aa12.06□□□□□ -0.48
UBE2D3-228ENST00000508974 SMN1Q16637 294 aaKnown RBP12.06□□□□□ -0.48
UBE2D3-228ENST00000508974 LRRC36Q1X8D7 754 aa12.06□□□□□ -0.48
UBE2D3-228ENST00000508974 PLA1AQ53H76 456 aa12.06□□□□□ -0.48
UBE2D3-228ENST00000508974 PRR31Q5SQ13 230 aa12.06□□□□□ -0.48
UBE2D3-228ENST00000508974 Q6ZSV7 163 aa12.06□□□□□ -0.48
UBE2D3-228ENST00000508974 LHFPL2Q6ZUX7 228 aa12.06□□□□□ -0.48
UBE2D3-228ENST00000508974 C11orf42Q8N5U0 333 aa12.06□□□□□ -0.48
UBE2D3-228ENST00000508974 DNAAF1Q8NEP3 725 aa12.06□□□□□ -0.48
UBE2D3-228ENST00000508974 OR52I1Q8NGK6 324 aa12.06□□□□□ -0.48
UBE2D3-228ENST00000508974 LINC01006Q8NI28 216 aa12.06□□□□□ -0.48
UBE2D3-228ENST00000508974 APH1BQ8WW43 257 aa12.06□□□□□ -0.48
UBE2D3-228ENST00000508974 MRPL48Q96GC5 212 aaKnown RBP12.06□□□□□ -0.48
UBE2D3-228ENST00000508974 OPALINQ96PE5 141 aa12.06□□□□□ -0.48
UBE2D3-228ENST00000508974 SSX3Q99909 188 aa12.06□□□□□ -0.48
UBE2D3-228ENST00000508974 FAM234AQ9H0X4 552 aa12.06□□□□□ -0.48
UBE2D3-228ENST00000508974 SLITRK2Q9H156 845 aa12.06□□□□□ -0.48
UBE2D3-228ENST00000508974 PPA2Q9H2U2 334 aa12.06□□□□□ -0.48
UBE2D3-228ENST00000508974 HEXA-AS1Q9H8Q6 139 aa12.06□□□□□ -0.48
UBE2D3-228ENST00000508974 NEK6Q9HC98 313 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms