RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 CFHR2P36980 270 aa4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 ALDH3B1P43353 468 aa4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 FUT6P51993 359 aa4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 GTF2A1P52655 376 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 TMEM33P57088 247 aa4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 GNG3P63215 75 aa4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 TNFAIP6P98066 277 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 TNK1Q13470 666 aa4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 ZNF181Q2M3W8 571 aa4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 DEFB113Q30KQ7 82 aa4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 ARMCX4Q5H9R4 360 aa4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 FAM76BQ5HYJ3 339 aa4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 SHEQ5VZ18 495 aa4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 HIST2H2BCQ6DN03 193 aa4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 UNQ9370/PRO34162Q6UXP9 181 aa4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 GDPGP1Q6ZNW5 385 aa4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 KCTD8Q6ZWB6 473 aa4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 CDH26Q8IXH8 852 aa4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 PHC2Q8IXK0 858 aa4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 ZDHHC23Q8IYP9 409 aa4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 C1orf87Q8N0U7 546 aa4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 PARP16Q8N5Y8 322 aa4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 BOLLQ8N9W6 283 aaKnown RBP4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 OR2Z1Q8NG97 314 aa4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 OR13C3Q8NGS6 347 aa4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 PIGCQ92535 297 aa4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 NPIPB3Q92617 1050 aa4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 SGCDQ92629 289 aa4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 RDH5Q92781 318 aa4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 SPSB1Q96BD6 273 aa4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 ELMOD3Q96FG2 381 aa4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 FAM71F1Q96KD3 344 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 OPALINQ96PE5 141 aa4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 FOXC2Q99958 501 aa4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 PDCD1LG2Q9BQ51 273 aa4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 RTL8AQ9BWD3 113 aa4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 PAPOLGQ9BWT3 736 aaKnown RBP4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 MRPS26Q9BYN8 205 aaKnown RBP4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 CXXC4Q9H2H0 198 aa4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 SAP30LQ9HAJ7 183 aa4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 LIN7CQ9NUP9 197 aaKnown RBP4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 GAR1Q9NY12 217 aaKnown RBP4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 MYEF2Q9P2K5 600 aaKnown RBP4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 CKLFQ9UBR5 152 aa4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 FZR1Q9UM11 496 aa4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 SLC7A11Q9UPY5 501 aa4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 PIGLQ9Y2B2 252 aa4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 PLEKHA6Q9Y2H5 1048 aa4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 RHBDD3Q9Y3P4 386 aa4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 FBN2P35556 2912 aa4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 MAP1AP78559 2803 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P44-201ENST00000508597 TANC2Q9HCD6 1990 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 IGHV1-69-2A0A0G2JMI3 117 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 TRDV1A0A1B0GX56 115 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 C5orf63A6NC05 138 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 TRIM64BA6NI03 449 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 FAM90A20PA6NIJ5 464 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 ZSCAN5BA6NJL1 495 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 LRRC30A6NM36 301 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 ZNF850A8MQ14 1090 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 ZNF879B4DU55 563 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 MLNRO43193 412 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 SPRY3O43610 288 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 SC5DO75845 299 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 ARL6IP5O75915 188 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 ACAA1P09110 424 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 OCMP0CE72 109 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 ATF1P18846 271 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 RAB3AP20336 220 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 CA6P23280 308 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 PSMB9P28065 219 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 CDKN1AP38936 164 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 CRYBB2P43320 205 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 MAP2K4P45985 399 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 RBP2P50120 134 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 PDLIM4P50479 330 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 PSMD7P51665 324 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 ATP1B3P54709 279 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 ATP5J2P56134 94 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 KRTAP10-9P60411 292 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 RPS11P62280 158 aaKnown RBP eCLIP4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 PPP3R1P63098 170 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 PRDX4Q13162 271 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 ODF4Q2M2E3 257 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 ALKBH6Q3KRA9 238 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 TIMM50Q3ZCQ8 353 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 ACSM3Q53FZ2 586 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 LIPKQ5VXJ0 399 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 XAF1Q6GPH4 301 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 ACSM6Q6P461 480 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 CD200R1LQ6Q8B3 271 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 Q6ZR03 302 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 ZNF573Q86YE8 665 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 RDH10Q8IZV5 341 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 OR5AS1Q8N127 324 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 BHLHE23Q8NDY6 225 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 OR52L2PQ8NGH6 319 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 OR11L1Q8NGX0 322 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 OR10Z1Q8NGY1 313 aa4.62□□□□□ -1.67
HMGB1P44-201ENST00000508597 ZNF671Q8TAW3 534 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms