RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 SPARTQ8N0X7 666 aa7.62□□□□□ -1.19
NUP54-207ENST00000508583 FAM58AQ8N1B3 248 aa7.62□□□□□ -1.19
NUP54-207ENST00000508583 C19orf18Q8NEA5 215 aa7.62□□□□□ -1.19
NUP54-207ENST00000508583 PXT1Q8NFP0 134 aa7.62□□□□□ -1.19
NUP54-207ENST00000508583 ANGPTL6Q8NI99 470 aa7.62□□□□□ -1.19
NUP54-207ENST00000508583 PPP1R35Q8TAP8 253 aa7.62□□□□□ -1.19
NUP54-207ENST00000508583 TBC1D15Q8TC07 691 aa7.62□□□□□ -1.19
NUP54-207ENST00000508583 SGCDQ92629 289 aa7.62□□□□□ -1.19
NUP54-207ENST00000508583 SLAMF9Q96A28 289 aa7.62□□□□□ -1.19
NUP54-207ENST00000508583 FOXRED1Q96CU9 486 aaPredicted RBP7.62□□□□□ -1.19
NUP54-207ENST00000508583 FAHD2AQ96GK7 314 aa7.62□□□□□ -1.19
NUP54-207ENST00000508583 UQCC2Q9BRT2 126 aa7.62□□□□□ -1.19
NUP54-207ENST00000508583 BEX2Q9BXY8 128 aa7.62□□□□□ -1.19
NUP54-207ENST00000508583 FAM192AQ9GZU8 254 aa7.62□□□□□ -1.19
NUP54-207ENST00000508583 FAM234AQ9H0X4 552 aa7.62□□□□□ -1.19
NUP54-207ENST00000508583 WDR13Q9H1Z4 485 aa7.62□□□□□ -1.19
NUP54-207ENST00000508583 SEBOXQ9HB31 216 aaPredicted RBP7.62□□□□□ -1.19
NUP54-207ENST00000508583 A0A087WXM4 84 aa7.61□□□□□ -1.19
NUP54-207ENST00000508583 TRBV23-1A0A0A0MS06 115 aa7.61□□□□□ -1.19
NUP54-207ENST00000508583 IGHV2-70DA0A0C4DH43 119 aa7.61□□□□□ -1.19
NUP54-207ENST00000508583 RFPL4AA6NLU0 287 aa7.61□□□□□ -1.19
NUP54-207ENST00000508583 RFPL4AL1F8VTS6 287 aa7.61□□□□□ -1.19
NUP54-207ENST00000508583 H3BUI4 141 aa7.61□□□□□ -1.19
NUP54-207ENST00000508583 CCRL2O00421 344 aa7.61□□□□□ -1.19
NUP54-207ENST00000508583 DVL1O14640 695 aa7.61□□□□□ -1.19
NUP54-207ENST00000508583 SH2D1BO14796 132 aa7.61□□□□□ -1.19
NUP54-207ENST00000508583 TNFRSF13BO14836 293 aaPredicted RBP7.61□□□□□ -1.19
NUP54-207ENST00000508583 PHF1O43189 567 aaPredicted RBP7.61□□□□□ -1.19
NUP54-207ENST00000508583 KDM4BO94953 1096 aa7.61□□□□□ -1.19
NUP54-207ENST00000508583 CSTBP04080 98 aaKnown RBP7.61□□□□□ -1.19
NUP54-207ENST00000508583 CHRM2P08172 466 aa7.61□□□□□ -1.19
NUP54-207ENST00000508583 PPIAL4GP0DN37 164 aa7.61□□□□□ -1.19
NUP54-207ENST00000508583 PSG2P11465 335 aa7.61□□□□□ -1.19
NUP54-207ENST00000508583 IGFBP3P17936 291 aaPredicted RBP7.61□□□□□ -1.19
NUP54-207ENST00000508583 GALP22466 123 aa7.61□□□□□ -1.19
NUP54-207ENST00000508583 PSMB9P28065 219 aa7.61□□□□□ -1.19
NUP54-207ENST00000508583 PRDX2P32119 198 aa7.61□□□□□ -1.19
NUP54-207ENST00000508583 PTGFRP43088 359 aa7.61□□□□□ -1.19
NUP54-207ENST00000508583 PSMD7P51665 324 aa7.61□□□□□ -1.19
NUP54-207ENST00000508583 CAPZA1P52907 286 aa7.61□□□□□ -1.19
NUP54-207ENST00000508583 CAV3P56539 151 aa7.61□□□□□ -1.19
NUP54-207ENST00000508583 IKZF1Q13422 519 aa7.61□□□□□ -1.19
NUP54-207ENST00000508583 RSU1Q15404 277 aa7.61□□□□□ -1.19
NUP54-207ENST00000508583 CR1LQ2VPA4 569 aa7.61□□□□□ -1.19
NUP54-207ENST00000508583 ARMCX4Q5H9R4 360 aa7.61□□□□□ -1.19
NUP54-207ENST00000508583 GLT8D1Q68CQ7 371 aa7.61□□□□□ -1.19
NUP54-207ENST00000508583 ZNF788Q6ZQV5 615 aa7.61□□□□□ -1.19
NUP54-207ENST00000508583 CEACAM19Q7Z692 300 aa7.61□□□□□ -1.19
NUP54-207ENST00000508583 CMTM4Q8IZR5 234 aa7.61□□□□□ -1.19
NUP54-207ENST00000508583 CHST4Q8NCG5 386 aa7.61□□□□□ -1.19
NUP54-207ENST00000508583 OR52N4Q8NGI2 321 aa7.61□□□□□ -1.19
NUP54-207ENST00000508583 OR5D13Q8NGL4 314 aa7.61□□□□□ -1.19
NUP54-207ENST00000508583 OR13C5Q8NGS8 318 aa7.61□□□□□ -1.19
NUP54-207ENST00000508583 TNFAIP8L1Q8WVP5 186 aa7.61□□□□□ -1.19
NUP54-207ENST00000508583 RAB40AQ8WXH6 277 aa7.61□□□□□ -1.19
NUP54-207ENST00000508583 ST8SIA4Q92187 359 aa7.61□□□□□ -1.19
NUP54-207ENST00000508583 SDSLQ96GA7 329 aa7.61□□□□□ -1.19
NUP54-207ENST00000508583 CCL13Q99616 98 aa7.61□□□□□ -1.19
NUP54-207ENST00000508583 METTL9Q9H1A3 318 aa7.61□□□□□ -1.19
NUP54-207ENST00000508583 ELL3Q9HB65 397 aaPredicted RBP7.61□□□□□ -1.19
NUP54-207ENST00000508583 NOX4Q9NPH5 578 aa7.61□□□□□ -1.19
NUP54-207ENST00000508583 SNTG1Q9NSN8 517 aa7.61□□□□□ -1.19
NUP54-207ENST00000508583 NDUFB11Q9NX14 153 aa7.61□□□□□ -1.19
NUP54-207ENST00000508583 MTCH1Q9NZJ7 389 aa7.61□□□□□ -1.19
NUP54-207ENST00000508583 SLC25A10Q9UBX3 287 aaPredicted RBP7.61□□□□□ -1.19
NUP54-207ENST00000508583 ABCA2Q9BZC7 2435 aa7.61□□□□□ -1.19
NUP54-207ENST00000508583 SONP18583 2426 aaKnown RBP7.6□□□□□ -1.19
NUP54-207ENST00000508583 IGKV1D-17A0A075B6S4 117 aa7.6□□□□□ -1.19
NUP54-207ENST00000508583 KIAA1324LA8MWY0 1029 aaPredicted RBP7.6□□□□□ -1.19
NUP54-207ENST00000508583 INAFM1C9JVW0 142 aa7.6□□□□□ -1.19
NUP54-207ENST00000508583 SPRY1O43609 319 aaPredicted RBP7.6□□□□□ -1.19
NUP54-207ENST00000508583 CRLF1O75462 422 aa7.6□□□□□ -1.19
NUP54-207ENST00000508583 SC5DO75845 299 aa7.6□□□□□ -1.19
NUP54-207ENST00000508583 IFNA2P01563 188 aa7.6□□□□□ -1.19
NUP54-207ENST00000508583 MAS1P04201 325 aa7.6□□□□□ -1.19
NUP54-207ENST00000508583 UCHL1P09936 223 aa7.6□□□□□ -1.19
NUP54-207ENST00000508583 NDUFB7P17568 137 aa7.6□□□□□ -1.19
NUP54-207ENST00000508583 PRKACAP17612 351 aa7.6□□□□□ -1.19
NUP54-207ENST00000508583 SRD5A1P18405 259 aa7.6□□□□□ -1.19
NUP54-207ENST00000508583 BCL3P20749 454 aa7.6□□□□□ -1.19
NUP54-207ENST00000508583 MYL9P24844 172 aa7.6□□□□□ -1.19
NUP54-207ENST00000508583 ZFP36P26651 326 aaKnown RBP7.6□□□□□ -1.19
NUP54-207ENST00000508583 SRP14P37108 136 aaKnown RBP7.6□□□□□ -1.19
NUP54-207ENST00000508583 RIPPLY3P57055 190 aa7.6□□□□□ -1.19
NUP54-207ENST00000508583 ZP1P60852 638 aa7.6□□□□□ -1.19
NUP54-207ENST00000508583 FGF12P61328 243 aa7.6□□□□□ -1.19
NUP54-207ENST00000508583 SEC61A1P61619 476 aaKnown RBP7.6□□□□□ -1.19
NUP54-207ENST00000508583 BLMHQ13867 455 aa7.6□□□□□ -1.19
NUP54-207ENST00000508583 ZNF146Q15072 292 aa7.6□□□□□ -1.19
NUP54-207ENST00000508583 FAM120AOSQ5T036 256 aa7.6□□□□□ -1.19
NUP54-207ENST00000508583 ELP2Q6IA86 826 aa7.6□□□□□ -1.19
NUP54-207ENST00000508583 LYPD2Q6UXB3 125 aa7.6□□□□□ -1.19
NUP54-207ENST00000508583 UNQ9370/PRO34162Q6UXP9 181 aa7.6□□□□□ -1.19
NUP54-207ENST00000508583 ZNF841Q6ZN19 808 aa7.6□□□□□ -1.19
NUP54-207ENST00000508583 LINC00596Q86U02 117 aa7.6□□□□□ -1.19
NUP54-207ENST00000508583 JAGN1Q8N5M9 183 aa7.6□□□□□ -1.19
NUP54-207ENST00000508583 FAM216BQ8N7L0 139 aa7.6□□□□□ -1.19
NUP54-207ENST00000508583 TMEM185AQ8NFB2 350 aa7.6□□□□□ -1.19
NUP54-207ENST00000508583 TSPAN14Q8NG11 270 aa7.6□□□□□ -1.19
NUP54-207ENST00000508583 OR5T2Q8NGG2 359 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms