RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 SLC35E4Q6ICL7 350 aa11.74□□□□□ -0.53
HMGCS1-203ENST00000507004 ZFP1Q6P2D0 407 aa11.74□□□□□ -0.53
HMGCS1-203ENST00000507004 ZBTB49Q6ZSB9 765 aa11.74□□□□□ -0.53
HMGCS1-203ENST00000507004 UTS2BQ765I0 119 aa11.74□□□□□ -0.53
HMGCS1-203ENST00000507004 OR8H2Q8N162 312 aa11.74□□□□□ -0.53
HMGCS1-203ENST00000507004 C11orf42Q8N5U0 333 aa11.74□□□□□ -0.53
HMGCS1-203ENST00000507004 EME1Q96AY2 570 aa11.74□□□□□ -0.53
HMGCS1-203ENST00000507004 SPSB1Q96BD6 273 aa11.74□□□□□ -0.53
HMGCS1-203ENST00000507004 MALSU1Q96EH3 234 aa11.74□□□□□ -0.53
HMGCS1-203ENST00000507004 RHOFQ9HBH0 211 aa11.74□□□□□ -0.53
HMGCS1-203ENST00000507004 FUOMA2VDF0 154 aa11.73□□□□□ -0.53
HMGCS1-203ENST00000507004 ISG15P05161 165 aa11.73□□□□□ -0.53
HMGCS1-203ENST00000507004 OCM2P0CE71 109 aa11.73□□□□□ -0.53
HMGCS1-203ENST00000507004 OCMP0CE72 109 aaPredicted RBP11.73□□□□□ -0.53
HMGCS1-203ENST00000507004 ZNF728P0DKX0 622 aa11.73□□□□□ -0.53
HMGCS1-203ENST00000507004 PEX2P28328 305 aa11.73□□□□□ -0.53
HMGCS1-203ENST00000507004 ISL1P61371 349 aa11.73□□□□□ -0.53
HMGCS1-203ENST00000507004 COL10A1Q03692 680 aa11.73□□□□□ -0.53
HMGCS1-203ENST00000507004 SRSF4Q08170 494 aaKnown RBP11.73□□□□□ -0.53
HMGCS1-203ENST00000507004 HERPUD1Q15011 391 aa11.73□□□□□ -0.53
HMGCS1-203ENST00000507004 UBE2V2Q15819 145 aa11.73□□□□□ -0.53
HMGCS1-203ENST00000507004 SPIN3Q5JUX0 258 aa11.73□□□□□ -0.53
HMGCS1-203ENST00000507004 FDX2Q6P4F2 183 aa11.73□□□□□ -0.53
HMGCS1-203ENST00000507004 LHFPL2Q6ZUX7 228 aa11.73□□□□□ -0.53
HMGCS1-203ENST00000507004 SSX6Q7RTT6 188 aa11.73□□□□□ -0.53
HMGCS1-203ENST00000507004 ANGPTL5Q86XS5 388 aa11.73□□□□□ -0.53
HMGCS1-203ENST00000507004 PNKDQ8N490 385 aa11.73□□□□□ -0.53
HMGCS1-203ENST00000507004 TRMT10AQ8TBZ6 339 aaKnown RBP11.73□□□□□ -0.53
HMGCS1-203ENST00000507004 HAVCR2Q8TDQ0 301 aa11.73□□□□□ -0.53
HMGCS1-203ENST00000507004 HRASLS5Q96KN8 279 aa11.73□□□□□ -0.53
HMGCS1-203ENST00000507004 ABCB10Q9NRK6 738 aa11.73□□□□□ -0.53
HMGCS1-203ENST00000507004 GNG8Q9UK08 70 aa11.73□□□□□ -0.53
HMGCS1-203ENST00000507004 PCDHGB5Q9Y5G0 923 aa11.73□□□□□ -0.53
HMGCS1-203ENST00000507004 LOC107986453A0A1B0GWG9 222 aa11.72□□□□□ -0.53
HMGCS1-203ENST00000507004 FAM90A8PA6NJQ4 464 aa11.72□□□□□ -0.53
HMGCS1-203ENST00000507004 MPZL2O60487 215 aa11.72□□□□□ -0.53
HMGCS1-203ENST00000507004 ZNF737O75373 536 aa11.72□□□□□ -0.53
HMGCS1-203ENST00000507004 ZNF20P17024 532 aa11.72□□□□□ -0.53
HMGCS1-203ENST00000507004 CCR9P51686 369 aa11.72□□□□□ -0.53
HMGCS1-203ENST00000507004 DLX1P56177 255 aa11.72□□□□□ -0.53
HMGCS1-203ENST00000507004 EDDM3BP56851 147 aa11.72□□□□□ -0.53
HMGCS1-203ENST00000507004 SNRPGP62308 76 aaKnown RBP11.72□□□□□ -0.53
HMGCS1-203ENST00000507004 ACTA2P62736 377 aa11.72□□□□□ -0.53
HMGCS1-203ENST00000507004 ACTG2P63267 376 aa11.72□□□□□ -0.53
HMGCS1-203ENST00000507004 PRB3Q04118 309 aaPredicted RBP11.72□□□□□ -0.53
HMGCS1-203ENST00000507004 MRPL28Q13084 256 aaKnown RBP11.72□□□□□ -0.53
HMGCS1-203ENST00000507004 ZNF273Q14593 569 aa11.72□□□□□ -0.53
HMGCS1-203ENST00000507004 MINOS1Q5TGZ0 78 aa11.72□□□□□ -0.53
HMGCS1-203ENST00000507004 SLC25A26Q70HW3 274 aa11.72□□□□□ -0.53
HMGCS1-203ENST00000507004 OR11H6Q8NGC7 330 aa11.72□□□□□ -0.53
HMGCS1-203ENST00000507004 OR4M1Q8NGD0 313 aa11.72□□□□□ -0.53
HMGCS1-203ENST00000507004 RPS4Y2Q8TD47 263 aa11.72□□□□□ -0.53
HMGCS1-203ENST00000507004 EMG1Q92979 244 aaKnown RBP11.72□□□□□ -0.53
HMGCS1-203ENST00000507004 ZNF714Q96N38 554 aa11.72□□□□□ -0.53
HMGCS1-203ENST00000507004 MTCH1Q9NZJ7 389 aa11.72□□□□□ -0.53
HMGCS1-203ENST00000507004 LINC00312Q9Y6C7 94 aa11.72□□□□□ -0.53
HMGCS1-203ENST00000507004 MINOS1-NBL1R4GNA1 71 aa11.72□□□□□ -0.53
HMGCS1-203ENST00000507004 TRRAPQ9Y4A5 3859 aa11.72□□□□□ -0.53
HMGCS1-203ENST00000507004 TRBV2A0A0J9YWF9 115 aa11.71□□□□□ -0.53
HMGCS1-203ENST00000507004 DAPL1A0PJW8 107 aa11.71□□□□□ -0.53
HMGCS1-203ENST00000507004 A6NIN4 97 aa11.71□□□□□ -0.53
HMGCS1-203ENST00000507004 SLC16A6O15403 523 aa11.71□□□□□ -0.53
HMGCS1-203ENST00000507004 KCNAB3O43448 404 aa11.71□□□□□ -0.53
HMGCS1-203ENST00000507004 ALDOBP05062 364 aa11.71□□□□□ -0.53
HMGCS1-203ENST00000507004 ALPLP05186 524 aa11.71□□□□□ -0.53
HMGCS1-203ENST00000507004 CSF1P09603 554 aa11.71□□□□□ -0.53
HMGCS1-203ENST00000507004 CCL3L1P16619 93 aa11.71□□□□□ -0.53
HMGCS1-203ENST00000507004 COX7A1P24310 79 aa11.71□□□□□ -0.53
HMGCS1-203ENST00000507004 ERP29P30040 261 aaKnown RBP11.71□□□□□ -0.53
HMGCS1-203ENST00000507004 POLR2IP36954 125 aaKnown RBP11.71□□□□□ -0.53
HMGCS1-203ENST00000507004 CEBPDP49716 269 aaPredicted RBP11.71□□□□□ -0.53
HMGCS1-203ENST00000507004 DYNLT3P51808 116 aa11.71□□□□□ -0.53
HMGCS1-203ENST00000507004 EFNB2P52799 333 aa11.71□□□□□ -0.53
HMGCS1-203ENST00000507004 KRTAP10-3P60369 221 aa11.71□□□□□ -0.53
HMGCS1-203ENST00000507004 ZNF85Q03923 595 aa11.71□□□□□ -0.53
HMGCS1-203ENST00000507004 ZNF146Q15072 292 aa11.71□□□□□ -0.53
HMGCS1-203ENST00000507004 ODF4Q2M2E3 257 aa11.71□□□□□ -0.53
HMGCS1-203ENST00000507004 ZNF626Q68DY1 528 aa11.71□□□□□ -0.53
HMGCS1-203ENST00000507004 ACBD7Q8N6N7 88 aa11.71□□□□□ -0.53
HMGCS1-203ENST00000507004 OR2G2Q8NGZ5 317 aa11.71□□□□□ -0.53
HMGCS1-203ENST00000507004 AJUBAQ96IF1 538 aa11.71□□□□□ -0.53
HMGCS1-203ENST00000507004 MBOAT4Q96T53 435 aa11.71□□□□□ -0.53
HMGCS1-203ENST00000507004 HHLA2Q9UM44 414 aa11.71□□□□□ -0.53
HMGCS1-203ENST00000507004 SAC3D1A6NKF1 404 aa11.7□□□□□ -0.54
HMGCS1-203ENST00000507004 MGST3O14880 152 aa11.7□□□□□ -0.54
HMGCS1-203ENST00000507004 HAND1O96004 215 aa11.7□□□□□ -0.54
HMGCS1-203ENST00000507004 MT-ND2P03891 347 aa11.7□□□□□ -0.54
HMGCS1-203ENST00000507004 ARG1P05089 322 aa11.7□□□□□ -0.54
HMGCS1-203ENST00000507004 HTR1AP08908 422 aa11.7□□□□□ -0.54
HMGCS1-203ENST00000507004 IGHV1-8P0DP01 117 aa11.7□□□□□ -0.54
HMGCS1-203ENST00000507004 PIPP12273 146 aaPredicted RBP11.7□□□□□ -0.54
HMGCS1-203ENST00000507004 ATF1P18846 271 aa11.7□□□□□ -0.54
HMGCS1-203ENST00000507004 ALDH3A2P51648 485 aa11.7□□□□□ -0.54
HMGCS1-203ENST00000507004 ARHGDIBP52566 201 aa11.7□□□□□ -0.54
HMGCS1-203ENST00000507004 DLX6P56179 175 aa11.7□□□□□ -0.54
HMGCS1-203ENST00000507004 MTCP1P56278 107 aa11.7□□□□□ -0.54
HMGCS1-203ENST00000507004 OR12D2P58182 307 aa11.7□□□□□ -0.54
HMGCS1-203ENST00000507004 ZNF91Q05481 1191 aa11.7□□□□□ -0.54
HMGCS1-203ENST00000507004 IL18R1Q13478 541 aa11.7□□□□□ -0.54
HMGCS1-203ENST00000507004 LY6EQ16553 131 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms