RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 BCL3P20749 454 aa11.69□□□□□ -0.54
HOXC9-202ENST00000504557 CCR9P51686 369 aa11.69□□□□□ -0.54
HOXC9-202ENST00000504557 GTF2A1P52655 376 aaPredicted RBP11.69□□□□□ -0.54
HOXC9-202ENST00000504557 EDDM3BP56851 147 aa11.69□□□□□ -0.54
HOXC9-202ENST00000504557 ERVFRD-1P60508 538 aa11.69□□□□□ -0.54
HOXC9-202ENST00000504557 EDDM3AQ14507 147 aa11.69□□□□□ -0.54
HOXC9-202ENST00000504557 ZNF691Q5VV52 312 aa11.69□□□□□ -0.54
HOXC9-202ENST00000504557 FDX2Q6P4F2 183 aa11.69□□□□□ -0.54
HOXC9-202ENST00000504557 C16orf87Q6PH81 154 aa11.69□□□□□ -0.54
HOXC9-202ENST00000504557 RNF144BQ7Z419 303 aa11.69□□□□□ -0.54
HOXC9-202ENST00000504557 OR5AK2Q8NH90 309 aa11.69□□□□□ -0.54
HOXC9-202ENST00000504557 OPALINQ96PE5 141 aa11.69□□□□□ -0.54
HOXC9-202ENST00000504557 MYCBPQ99417 103 aaPredicted RBP11.69□□□□□ -0.54
HOXC9-202ENST00000504557 CHIAQ9BZP6 476 aa11.69□□□□□ -0.54
HOXC9-202ENST00000504557 COMMD4Q9H0A8 199 aa11.69□□□□□ -0.54
HOXC9-202ENST00000504557 HES4Q9HCC6 221 aa11.69□□□□□ -0.54
HOXC9-202ENST00000504557 NOX4Q9NPH5 578 aa11.69□□□□□ -0.54
HOXC9-202ENST00000504557 RBFOX1Q9NWB1 397 aaKnown RBP11.69□□□□□ -0.54
HOXC9-202ENST00000504557 TRBV2A0A0J9YWF9 115 aa11.68□□□□□ -0.54
HOXC9-202ENST00000504557 ZFPL1O95159 310 aa11.68□□□□□ -0.54
HOXC9-202ENST00000504557 PAHP00439 452 aa11.68□□□□□ -0.54
HOXC9-202ENST00000504557 KNG1P01042 644 aa11.68□□□□□ -0.54
HOXC9-202ENST00000504557 TK1P04183 234 aa11.68□□□□□ -0.54
HOXC9-202ENST00000504557 ISG15P05161 165 aa11.68□□□□□ -0.54
HOXC9-202ENST00000504557 HCKP08631 526 aa11.68□□□□□ -0.54
HOXC9-202ENST00000504557 PRKACAP17612 351 aa11.68□□□□□ -0.54
HOXC9-202ENST00000504557 PRKACBP22694 351 aa11.68□□□□□ -0.54
HOXC9-202ENST00000504557 COX7A1P24310 79 aa11.68□□□□□ -0.54
HOXC9-202ENST00000504557 NPBWR2P48146 333 aa11.68□□□□□ -0.54
HOXC9-202ENST00000504557 SOX2P48431 317 aa11.68□□□□□ -0.54
HOXC9-202ENST00000504557 ETV1P50549 477 aa11.68□□□□□ -0.54
HOXC9-202ENST00000504557 ERVK11-1P61568 191 aa11.68□□□□□ -0.54
HOXC9-202ENST00000504557 GUCA2AQ02747 115 aa11.68□□□□□ -0.54
HOXC9-202ENST00000504557 FOXL1Q12952 345 aa11.68□□□□□ -0.54
HOXC9-202ENST00000504557 OR2G6Q5TZ20 316 aa11.68□□□□□ -0.54
HOXC9-202ENST00000504557 MKXQ8IYA7 352 aa11.68□□□□□ -0.54
HOXC9-202ENST00000504557 SYS1Q8N2H4 156 aa11.68□□□□□ -0.54
HOXC9-202ENST00000504557 DHRSXQ8N5I4 330 aa11.68□□□□□ -0.54
HOXC9-202ENST00000504557 C10orf35Q96D05 121 aa11.68□□□□□ -0.54
HOXC9-202ENST00000504557 RDH12Q96NR8 316 aa11.68□□□□□ -0.54
HOXC9-202ENST00000504557 CHST6Q9GZX3 395 aa11.68□□□□□ -0.54
HOXC9-202ENST00000504557 METTL8Q9H825 291 aaKnown RBP11.68□□□□□ -0.54
HOXC9-202ENST00000504557 INPP5EQ9NRR6 644 aa11.68□□□□□ -0.54
HOXC9-202ENST00000504557 DHDHQ9UQ10 334 aa11.68□□□□□ -0.54
HOXC9-202ENST00000504557 TRBV23-1A0A0A0MS06 115 aa11.67□□□□□ -0.54
HOXC9-202ENST00000504557 CLDN34H7C241 214 aa11.67□□□□□ -0.54
HOXC9-202ENST00000504557 M0R1W7 72 aa11.67□□□□□ -0.54
HOXC9-202ENST00000504557 HAND1O96004 215 aa11.67□□□□□ -0.54
HOXC9-202ENST00000504557 LIMS3P0CW19 117 aa11.67□□□□□ -0.54
HOXC9-202ENST00000504557 LIMS4P0CW20 117 aa11.67□□□□□ -0.54
HOXC9-202ENST00000504557 MDKP21741 143 aaPredicted RBP11.67□□□□□ -0.54
HOXC9-202ENST00000504557 GABRR1P24046 479 aa11.67□□□□□ -0.54
HOXC9-202ENST00000504557 SAA4P35542 130 aa11.67□□□□□ -0.54
HOXC9-202ENST00000504557 COMPP49747 757 aaPredicted RBP11.67□□□□□ -0.54
HOXC9-202ENST00000504557 SCN1BQ07699 218 aa11.67□□□□□ -0.54
HOXC9-202ENST00000504557 ZNF273Q14593 569 aa11.67□□□□□ -0.54
HOXC9-202ENST00000504557 TTC23Q5W5X9 447 aa11.67□□□□□ -0.54
HOXC9-202ENST00000504557 TMEM200BQ69YZ2 307 aa11.67□□□□□ -0.54
HOXC9-202ENST00000504557 ZNF782Q6ZMW2 699 aaPredicted RBP11.67□□□□□ -0.54
HOXC9-202ENST00000504557 LHFPL2Q6ZUX7 228 aa11.67□□□□□ -0.54
HOXC9-202ENST00000504557 GDPD3Q7L5L3 318 aa11.67□□□□□ -0.54
HOXC9-202ENST00000504557 TPRX1Q8N7U7 411 aa11.67□□□□□ -0.54
HOXC9-202ENST00000504557 TBC1D15Q8TC07 691 aa11.67□□□□□ -0.54
HOXC9-202ENST00000504557 SSMEM1Q8WWF3 244 aa11.67□□□□□ -0.54
HOXC9-202ENST00000504557 ZNF649Q9BS31 505 aa11.67□□□□□ -0.54
HOXC9-202ENST00000504557 ZCCHC4Q9H5U6 513 aa11.67□□□□□ -0.54
HOXC9-202ENST00000504557 A0A1W2PPH5 198 aa11.66□□□□□ -0.54
HOXC9-202ENST00000504557 TMEM212A6NML5 194 aa11.66□□□□□ -0.54
HOXC9-202ENST00000504557 SIRPB1O00241 398 aa11.66□□□□□ -0.54
HOXC9-202ENST00000504557 CHRM2P08172 466 aa11.66□□□□□ -0.54
HOXC9-202ENST00000504557 FBP1P09467 338 aa11.66□□□□□ -0.54
HOXC9-202ENST00000504557 CCDC159P0C7I6 412 aa11.66□□□□□ -0.54
HOXC9-202ENST00000504557 MYL12AP19105 171 aa11.66□□□□□ -0.54
HOXC9-202ENST00000504557 PAX6P26367 422 aa11.66□□□□□ -0.54
HOXC9-202ENST00000504557 NCR3LG1Q68D85 454 aa11.66□□□□□ -0.54
HOXC9-202ENST00000504557 XAF1Q6GPH4 301 aa11.66□□□□□ -0.54
HOXC9-202ENST00000504557 UTS2BQ765I0 119 aa11.66□□□□□ -0.54
HOXC9-202ENST00000504557 SATL1Q86VE3 508 aa11.66□□□□□ -0.54
HOXC9-202ENST00000504557 FAM58AQ8N1B3 248 aa11.66□□□□□ -0.54
HOXC9-202ENST00000504557 SETD9Q8NE22 299 aa11.66□□□□□ -0.54
HOXC9-202ENST00000504557 DNAAF1Q8NEP3 725 aa11.66□□□□□ -0.54
HOXC9-202ENST00000504557 OR5D13Q8NGL4 314 aa11.66□□□□□ -0.54
HOXC9-202ENST00000504557 C17orf50Q8WW18 174 aa11.66□□□□□ -0.54
HOXC9-202ENST00000504557 TNFRSF14Q92956 283 aa11.66□□□□□ -0.54
HOXC9-202ENST00000504557 SPSB1Q96BD6 273 aa11.66□□□□□ -0.54
HOXC9-202ENST00000504557 NKX3-1Q99801 234 aaPredicted RBP11.66□□□□□ -0.54
HOXC9-202ENST00000504557 UNKLQ9H9P5 680 aaKnown RBP11.66□□□□□ -0.54
HOXC9-202ENST00000504557 ING3Q9NXR8 418 aa11.66□□□□□ -0.54
HOXC9-202ENST00000504557 GSTK1Q9Y2Q3 226 aa11.66□□□□□ -0.54
HOXC9-202ENST00000504557 CAB39Q9Y376 341 aaPredicted RBP11.66□□□□□ -0.54
HOXC9-202ENST00000504557 ANK2Q01484 3957 aa11.66□□□□□ -0.54
HOXC9-202ENST00000504557 TMEM82A0PJX8 343 aa11.65□□□□□ -0.54
HOXC9-202ENST00000504557 BTBD17A6NE02 478 aa11.65□□□□□ -0.54
HOXC9-202ENST00000504557 K7N7A8 449 aa11.65□□□□□ -0.54
HOXC9-202ENST00000504557 RPSAP08865 295 aaKnown RBP11.65□□□□□ -0.54
HOXC9-202ENST00000504557 GNAO1P09471 354 aa11.65□□□□□ -0.54
HOXC9-202ENST00000504557 TMEM225BP0DP42 221 aa11.65□□□□□ -0.54
HOXC9-202ENST00000504557 IER3P46695 156 aa11.65□□□□□ -0.54
HOXC9-202ENST00000504557 UBE2E1P51965 193 aa11.65□□□□□ -0.54
HOXC9-202ENST00000504557 PDZK1IP1Q13113 114 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms