RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 FBLN5Q9UBX5 448 aa17.14■□□□□ 0.34
CDC42SE2-206ENST00000503291 ARID1AO14497 2285 aa17.14■□□□□ 0.33
CDC42SE2-206ENST00000503291 MPIG6BO95866 241 aa17.14■□□□□ 0.33
CDC42SE2-206ENST00000503291 PAX1P15863 534 aa17.14■□□□□ 0.33
CDC42SE2-206ENST00000503291 MGMTP16455 207 aa17.14■□□□□ 0.33
CDC42SE2-206ENST00000503291 PRKACAP17612 351 aa17.14■□□□□ 0.33
CDC42SE2-206ENST00000503291 PTH2RP49190 550 aa17.14■□□□□ 0.33
CDC42SE2-206ENST00000503291 FGF12P61328 243 aa17.14■□□□□ 0.33
CDC42SE2-206ENST00000503291 DYNC1I2Q13409 638 aaKnown RBP17.14■□□□□ 0.33
CDC42SE2-206ENST00000503291 SFRP4Q6FHJ7 346 aaPredicted RBP17.14■□□□□ 0.33
CDC42SE2-206ENST00000503291 MZT2AQ6P582 158 aa17.14■□□□□ 0.33
CDC42SE2-206ENST00000503291 ACP7Q6ZNF0 438 aa17.14■□□□□ 0.33
CDC42SE2-206ENST00000503291 RASL12Q9NYN1 266 aa17.14■□□□□ 0.33
CDC42SE2-206ENST00000503291 ETV7Q9Y603 341 aa17.14■□□□□ 0.33
CDC42SE2-206ENST00000503291 A0A075B6Q4 140 aa17.13■□□□□ 0.33
CDC42SE2-206ENST00000503291 SSX4O60224 188 aa17.13■□□□□ 0.33
CDC42SE2-206ENST00000503291 DNASE1P24855 282 aa17.13■□□□□ 0.33
CDC42SE2-206ENST00000503291 BMXP51813 675 aa17.13■□□□□ 0.33
CDC42SE2-206ENST00000503291 EFNB2P52799 333 aa17.13■□□□□ 0.33
CDC42SE2-206ENST00000503291 CDH24Q86UP0 819 aa17.13■□□□□ 0.33
CDC42SE2-206ENST00000503291 MRPS24Q96EL2 167 aaKnown RBP17.13■□□□□ 0.33
CDC42SE2-206ENST00000503291 PERPQ96FX8 193 aa17.13■□□□□ 0.33
CDC42SE2-206ENST00000503291 TMEM59Q9BXS4 323 aa17.13■□□□□ 0.33
CDC42SE2-206ENST00000503291 GSX2Q9BZM3 304 aa17.13■□□□□ 0.33
CDC42SE2-206ENST00000503291 C6orf62Q9GZU0 229 aaPredicted RBP17.13■□□□□ 0.33
CDC42SE2-206ENST00000503291 IL36RNQ9UBH0 155 aa17.13■□□□□ 0.33
CDC42SE2-206ENST00000503291 RAB22AQ9UL26 194 aa17.13■□□□□ 0.33
CDC42SE2-206ENST00000503291 CTDSP2O14595 271 aa17.13■□□□□ 0.33
CDC42SE2-206ENST00000503291 CD80P33681 288 aa17.13■□□□□ 0.33
CDC42SE2-206ENST00000503291 SAMD12Q8N8I0 201 aa17.13■□□□□ 0.33
CDC42SE2-206ENST00000503291 SELENOIQ9C0D9 397 aa17.13■□□□□ 0.33
CDC42SE2-206ENST00000503291 CHODLQ9H9P2 273 aa17.13■□□□□ 0.33
CDC42SE2-206ENST00000503291 ST3GAL6Q9Y274 331 aa17.13■□□□□ 0.33
CDC42SE2-206ENST00000503291 SNU13P55769 128 aaKnown RBP17.12■□□□□ 0.33
CDC42SE2-206ENST00000503291 SMIM21Q3B7S5 101 aa17.12■□□□□ 0.33
CDC42SE2-206ENST00000503291 PIGYQ3MUY2 71 aa17.12■□□□□ 0.33
CDC42SE2-206ENST00000503291 METAP1DQ6UB28 335 aaPredicted RBP17.12■□□□□ 0.33
CDC42SE2-206ENST00000503291 OR51T1Q8NGJ9 327 aa17.12■□□□□ 0.33
CDC42SE2-206ENST00000503291 PTX4Q96A99 478 aa17.12■□□□□ 0.33
CDC42SE2-206ENST00000503291 LURAP1Q96LR2 239 aa17.12■□□□□ 0.33
CDC42SE2-206ENST00000503291 GAL3ST1Q99999 423 aa17.12■□□□□ 0.33
CDC42SE2-206ENST00000503291 MMP27Q9H306 513 aa17.12■□□□□ 0.33
CDC42SE2-206ENST00000503291 DNAJB11Q9UBS4 358 aa17.12■□□□□ 0.33
CDC42SE2-206ENST00000503291 ANKRD17O75179 2603 aaKnown RBP17.12■□□□□ 0.33
CDC42SE2-206ENST00000503291 ITPR2Q14571 2701 aa17.12■□□□□ 0.33
CDC42SE2-206ENST00000503291 PPIAL4EA0A075B759 164 aa17.11■□□□□ 0.33
CDC42SE2-206ENST00000503291 IGHV3OR15-7A0A075B7D8 119 aa17.11■□□□□ 0.33
CDC42SE2-206ENST00000503291 PPIAL4DF5H284 164 aa17.11■□□□□ 0.33
CDC42SE2-206ENST00000503291 RGS5O15539 181 aa17.11■□□□□ 0.33
CDC42SE2-206ENST00000503291 HPGDSO60760 199 aa17.11■□□□□ 0.33
CDC42SE2-206ENST00000503291 PPIAL4FP0DN26 164 aa17.11■□□□□ 0.33
CDC42SE2-206ENST00000503291 RAB6AP20340 208 aa17.11■□□□□ 0.33
CDC42SE2-206ENST00000503291 DUSP1P28562 367 aa17.11■□□□□ 0.33
CDC42SE2-206ENST00000503291 CARTPTQ16568 116 aa17.11■□□□□ 0.33
CDC42SE2-206ENST00000503291 ZNF525Q8N782 197 aa17.11■□□□□ 0.33
CDC42SE2-206ENST00000503291 DEFB108BQ8NET1 73 aa17.11■□□□□ 0.33
CDC42SE2-206ENST00000503291 OR5T2Q8NGG2 359 aa17.11■□□□□ 0.33
CDC42SE2-206ENST00000503291 BARX1Q9HBU1 254 aaPredicted RBP17.11■□□□□ 0.33
CDC42SE2-206ENST00000503291 PPIAL4AQ9Y536 164 aa17.11■□□□□ 0.33
CDC42SE2-206ENST00000503291 A3GALT2U3KPV4 340 aa17.11■□□□□ 0.33
CDC42SE2-206ENST00000503291 CLDN25C9JDP6 229 aa17.11■□□□□ 0.33
CDC42SE2-206ENST00000503291 ART1P52961 327 aa17.11■□□□□ 0.33
CDC42SE2-206ENST00000503291 TMEM33P57088 247 aa17.11■□□□□ 0.33
CDC42SE2-206ENST00000503291 RPS27AP62979 156 aaKnown RBP17.11■□□□□ 0.33
CDC42SE2-206ENST00000503291 MICBQ29980 383 aa17.11■□□□□ 0.33
CDC42SE2-206ENST00000503291 SLC25A38Q96DW6 304 aa17.11■□□□□ 0.33
CDC42SE2-206ENST00000503291 LPAR5Q9H1C0 372 aa17.11■□□□□ 0.33
CDC42SE2-206ENST00000503291 BEX4Q9NWD9 120 aaPredicted RBP17.11■□□□□ 0.33
CDC42SE2-206ENST00000503291 RHBDL2Q9NX52 303 aa17.11■□□□□ 0.33
CDC42SE2-206ENST00000503291 PTTG2Q9NZH5 202 aa17.11■□□□□ 0.33
CDC42SE2-206ENST00000503291 NLKQ9UBE8 527 aa17.11■□□□□ 0.33
CDC42SE2-206ENST00000503291 OOEPA6NGQ2 149 aa17.1■□□□□ 0.33
CDC42SE2-206ENST00000503291 GEMIN2O14893 280 aaKnown RBP17.1■□□□□ 0.33
CDC42SE2-206ENST00000503291 RBM11P57052 281 aaKnown RBP17.1■□□□□ 0.33
CDC42SE2-206ENST00000503291 ZNF146Q15072 292 aa17.1■□□□□ 0.33
CDC42SE2-206ENST00000503291 TAF9Q16594 264 aa17.1■□□□□ 0.33
CDC42SE2-206ENST00000503291 DEFB113Q30KQ7 82 aa17.1■□□□□ 0.33
CDC42SE2-206ENST00000503291 TEX36Q5VZQ5 186 aa17.1■□□□□ 0.33
CDC42SE2-206ENST00000503291 PEG10Q86TG7 708 aaKnown RBP17.1■□□□□ 0.33
CDC42SE2-206ENST00000503291 Q96M66 194 aa17.1■□□□□ 0.33
CDC42SE2-206ENST00000503291 URM1Q9BTM9 101 aaKnown RBP17.1■□□□□ 0.33
CDC42SE2-206ENST00000503291 NAV2Q8IVL1 2488 aa17.1■□□□□ 0.33
CDC42SE2-206ENST00000503291 OR2AT4A6NND4 320 aa17.09■□□□□ 0.33
CDC42SE2-206ENST00000503291 KNG1P01042 644 aa17.09■□□□□ 0.33
CDC42SE2-206ENST00000503291 MUC1P15941 1255 aaPredicted RBP17.09■□□□□ 0.33
CDC42SE2-206ENST00000503291 PDCD1Q15116 288 aa17.09■□□□□ 0.33
CDC42SE2-206ENST00000503291 NHLRC3Q5JS37 347 aa17.09■□□□□ 0.33
CDC42SE2-206ENST00000503291 FIP1L1Q6UN15 594 aaKnown RBP17.09■□□□□ 0.33
CDC42SE2-206ENST00000503291 BIVMQ86UB2 503 aa17.09■□□□□ 0.33
CDC42SE2-206ENST00000503291 FAM90A1Q86YD7 464 aa17.09■□□□□ 0.33
CDC42SE2-206ENST00000503291 NICN1Q9BSH3 213 aa17.09■□□□□ 0.33
CDC42SE2-206ENST00000503291 TM2D1Q9BX74 207 aa17.09■□□□□ 0.33
CDC42SE2-206ENST00000503291 MYOZ1Q9NP98 299 aaPredicted RBP17.09■□□□□ 0.33
CDC42SE2-206ENST00000503291 RFPL4AA6NLU0 287 aa17.09■□□□□ 0.33
CDC42SE2-206ENST00000503291 RFPL4AL1F8VTS6 287 aa17.09■□□□□ 0.33
CDC42SE2-206ENST00000503291 LGALS8O00214 317 aa17.09■□□□□ 0.33
CDC42SE2-206ENST00000503291 PPIHO43447 177 aaKnown RBP17.09■□□□□ 0.33
CDC42SE2-206ENST00000503291 PSG2P11465 335 aa17.09■□□□□ 0.33
CDC42SE2-206ENST00000503291 BTG1P62324 171 aa17.09■□□□□ 0.33
CDC42SE2-206ENST00000503291 UBE2NLQ5JXB2 153 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms