RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 APOBEC3DQ96AK3 386 aaPredicted RBP10.39□□□□□ -0.75
NUP54-202ENST00000502850 APH1AQ96BI3 265 aa10.39□□□□□ -0.75
NUP54-202ENST00000502850 WBP1Q96G27 269 aa10.39□□□□□ -0.75
NUP54-202ENST00000502850 SIGLEC12Q96PQ1 595 aa10.39□□□□□ -0.75
NUP54-202ENST00000502850 ZNF2Q9BSG1 426 aaPredicted RBP10.39□□□□□ -0.75
NUP54-202ENST00000502850 ZNF286AQ9HBT8 521 aa10.39□□□□□ -0.75
NUP54-202ENST00000502850 PTPRBP23467 1997 aa10.38□□□□□ -0.75
NUP54-202ENST00000502850 KMT2BQ9UMN6 2715 aaPredicted RBP10.38□□□□□ -0.75
NUP54-202ENST00000502850 PMS2P1A4D2B8 440 aa10.38□□□□□ -0.75
NUP54-202ENST00000502850 SDCBPO00560 298 aaPredicted RBP10.38□□□□□ -0.75
NUP54-202ENST00000502850 SPRY1O43609 319 aaPredicted RBP10.38□□□□□ -0.75
NUP54-202ENST00000502850 NME2P1O60361 137 aa10.38□□□□□ -0.75
NUP54-202ENST00000502850 PDCD6O75340 191 aa10.38□□□□□ -0.75
NUP54-202ENST00000502850 IFNA21P01568 189 aa10.38□□□□□ -0.75
NUP54-202ENST00000502850 FCGR3AP08637 254 aa10.38□□□□□ -0.75
NUP54-202ENST00000502850 OR5H8P0DN80 308 aa10.38□□□□□ -0.75
NUP54-202ENST00000502850 CD46P15529 392 aa10.38□□□□□ -0.75
NUP54-202ENST00000502850 NME2P22392 152 aa10.38□□□□□ -0.75
NUP54-202ENST00000502850 CD82P27701 267 aa10.38□□□□□ -0.75
NUP54-202ENST00000502850 ARF1P84077 181 aaKnown RBP10.38□□□□□ -0.75
NUP54-202ENST00000502850 ATXN7L3Q14CW9 347 aaPredicted RBP10.38□□□□□ -0.75
NUP54-202ENST00000502850 TAF9Q16594 264 aa10.38□□□□□ -0.75
NUP54-202ENST00000502850 GLRX5Q86SX6 157 aa10.38□□□□□ -0.75
NUP54-202ENST00000502850 BVESQ8NE79 360 aa10.38□□□□□ -0.75
NUP54-202ENST00000502850 PIK3IP1Q96FE7 263 aa10.38□□□□□ -0.75
NUP54-202ENST00000502850 C12orf4Q9NQ89 552 aa10.38□□□□□ -0.75
NUP54-202ENST00000502850 ZFP57Q9NU63 452 aa10.38□□□□□ -0.75
NUP54-202ENST00000502850 AK3Q9UIJ7 227 aa10.38□□□□□ -0.75
NUP54-202ENST00000502850 KCNIP3Q9Y2W7 256 aa10.38□□□□□ -0.75
NUP54-202ENST00000502850 MSRB2Q9Y3D2 182 aa10.38□□□□□ -0.75
NUP54-202ENST00000502850 KCNMB2Q9Y691 235 aa10.38□□□□□ -0.75
NUP54-202ENST00000502850 IGKV1-27A0A075B6S5 117 aa10.37□□□□□ -0.75
NUP54-202ENST00000502850 NUDT19A8MXV4 375 aa10.37□□□□□ -0.75
NUP54-202ENST00000502850 F8VVB4 439 aa10.37□□□□□ -0.75
NUP54-202ENST00000502850 F8VWA3 439 aa10.37□□□□□ -0.75
NUP54-202ENST00000502850 TAAR5O14804 337 aa10.37□□□□□ -0.75
NUP54-202ENST00000502850 ANGPTL7O43827 346 aa10.37□□□□□ -0.75
NUP54-202ENST00000502850 F10P00742 488 aa10.37□□□□□ -0.75
NUP54-202ENST00000502850 SP1P08047 785 aa10.37□□□□□ -0.75
NUP54-202ENST00000502850 FTH1P19P0C7X4 201 aa10.37□□□□□ -0.75
NUP54-202ENST00000502850 PATE4P0C8F1 98 aa10.37□□□□□ -0.75
NUP54-202ENST00000502850 EDN3P14138 238 aa10.37□□□□□ -0.75
NUP54-202ENST00000502850 RPS2P15880 293 aaKnown RBP10.37□□□□□ -0.75
NUP54-202ENST00000502850 GLP1RP43220 463 aa10.37□□□□□ -0.75
NUP54-202ENST00000502850 RBM11P57052 281 aaKnown RBP10.37□□□□□ -0.75
NUP54-202ENST00000502850 PLP2Q04941 152 aa10.37□□□□□ -0.75
NUP54-202ENST00000502850 SMCO1Q147U7 214 aa10.37□□□□□ -0.75
NUP54-202ENST00000502850 TMEM211Q6ICI0 200 aa10.37□□□□□ -0.75
NUP54-202ENST00000502850 MRPL21Q7Z2W9 205 aaKnown RBP10.37□□□□□ -0.75
NUP54-202ENST00000502850 DTX1Q86Y01 620 aa10.37□□□□□ -0.75
NUP54-202ENST00000502850 TMEM251Q8N6I4 163 aa10.37□□□□□ -0.75
NUP54-202ENST00000502850 KDF1Q8NAX2 398 aaPredicted RBP10.37□□□□□ -0.75
NUP54-202ENST00000502850 FNDC9Q8TBE3 224 aa10.37□□□□□ -0.75
NUP54-202ENST00000502850 NANOS1Q8WY41 292 aaKnown RBP10.37□□□□□ -0.75
NUP54-202ENST00000502850 PIGCQ92535 297 aa10.37□□□□□ -0.75
NUP54-202ENST00000502850 AQP10Q96PS8 301 aa10.37□□□□□ -0.75
NUP54-202ENST00000502850 SHARPINQ9H0F6 387 aa10.37□□□□□ -0.75
NUP54-202ENST00000502850 NARFLQ9H6Q4 476 aa10.37□□□□□ -0.75
NUP54-202ENST00000502850 GP6Q9HCN6 339 aa10.37□□□□□ -0.75
NUP54-202ENST00000502850 ACKR4Q9NPB9 350 aa10.37□□□□□ -0.75
NUP54-202ENST00000502850 SLC7A10Q9NS82 523 aa10.37□□□□□ -0.75
NUP54-202ENST00000502850 ST3GAL6Q9Y274 331 aa10.37□□□□□ -0.75
NUP54-202ENST00000502850 MYO7BQ6PIF6 2116 aa10.37□□□□□ -0.75
NUP54-202ENST00000502850 TMEM8BA6NDV4 472 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 CRYM-AS1A6NIL9 109 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 ZSCAN5BA6NJL1 495 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 POM121CA8CG34 1229 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 ZNF850A8MQ14 1090 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 FAM166BA8MTA8 275 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 PLATP00750 562 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 CST4P01036 141 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 ZNF250P15622 560 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 FUT3P21217 361 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 GLRA1P23415 457 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 MAGEA5P43359 124 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 MEOX1P50221 254 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 SRYQ05066 204 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 SRSF7Q16629 238 aaKnown RBP eCLIP10.36□□□□□ -0.75
NUP54-202ENST00000502850 ANKRD55Q3KP44 614 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 ABCA11PQ4W5N1 156 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 DMRTC1Q5HYR2 192 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 HES3Q5TGS1 186 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 EIF5AL1Q6IS14 154 aaKnown RBP10.36□□□□□ -0.75
NUP54-202ENST00000502850 UQCC3Q6UW78 93 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 DHRS11Q6UWP2 260 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 FBXL14Q8N1E6 418 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 CCDC71LQ8N9Z2 235 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 POC1AQ8NBT0 407 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 MDS2Q8NDY4 140 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 Q8NFD4 153 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 OR10AD1Q8NGE0 317 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 OR51F2Q8NH61 342 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 SYT3Q9BQG1 590 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 FAAP24Q9BTP7 215 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 REPIN1Q9BWE0 567 aaKnown RBP10.36□□□□□ -0.75
NUP54-202ENST00000502850 SLC6A15Q9H2J7 730 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 CALHM2Q9HA72 323 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 TNFSF15O95150 251 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 KNG1P01042 644 aa10.36□□□□□ -0.75
NUP54-202ENST00000502850 ZNF728P0DKX0 622 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms