RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 ATP1B3P54709 279 aa13.15□□□□□ -0.3
NR1H3-227ENST00000498548 SNU13P55769 128 aaKnown RBP13.15□□□□□ -0.3
NR1H3-227ENST00000498548 ALKBH1Q13686 389 aaKnown RBP13.15□□□□□ -0.3
NR1H3-227ENST00000498548 CNN3Q15417 329 aaKnown RBP13.15□□□□□ -0.3
NR1H3-227ENST00000498548 NCR3LG1Q68D85 454 aa13.15□□□□□ -0.3
NR1H3-227ENST00000498548 FDX2Q6P4F2 183 aa13.15□□□□□ -0.3
NR1H3-227ENST00000498548 C11orf42Q8N5U0 333 aa13.15□□□□□ -0.3
NR1H3-227ENST00000498548 ASCC1Q8N9N2 400 aaKnown RBP13.15□□□□□ -0.3
NR1H3-227ENST00000498548 DYRK2Q92630 601 aa13.15□□□□□ -0.3
NR1H3-227ENST00000498548 ALG8Q9BVK2 526 aa13.15□□□□□ -0.3
NR1H3-227ENST00000498548 DPAGT1Q9H3H5 408 aa13.15□□□□□ -0.3
NR1H3-227ENST00000498548 BEX1Q9HBH7 125 aa13.15□□□□□ -0.3
NR1H3-227ENST00000498548 SF3B6Q9Y3B4 125 aaKnown RBP13.15□□□□□ -0.3
NR1H3-227ENST00000498548 SNTNA6NMZ2 147 aa13.14□□□□□ -0.31
NR1H3-227ENST00000498548 OR4C45A6NMZ5 311 aa13.14□□□□□ -0.31
NR1H3-227ENST00000498548 E9PI62 339 aa13.14□□□□□ -0.31
NR1H3-227ENST00000498548 PAHP00439 452 aa13.14□□□□□ -0.31
NR1H3-227ENST00000498548 ISG15P05161 165 aa13.14□□□□□ -0.31
NR1H3-227ENST00000498548 CHRM2P08172 466 aa13.14□□□□□ -0.31
NR1H3-227ENST00000498548 BCL3P20749 454 aa13.14□□□□□ -0.31
NR1H3-227ENST00000498548 COX7A1P24310 79 aa13.14□□□□□ -0.31
NR1H3-227ENST00000498548 AZGP1P25311 298 aaKnown RBP13.14□□□□□ -0.31
NR1H3-227ENST00000498548 DUSP1P28562 367 aa13.14□□□□□ -0.31
NR1H3-227ENST00000498548 RBP2P50120 134 aa13.14□□□□□ -0.31
NR1H3-227ENST00000498548 MTCP1P56278 107 aa13.14□□□□□ -0.31
NR1H3-227ENST00000498548 GALEQ14376 348 aa13.14□□□□□ -0.31
NR1H3-227ENST00000498548 OLFML2AQ68BL7 652 aa13.14□□□□□ -0.31
NR1H3-227ENST00000498548 OR52I1Q8NGK6 324 aa13.14□□□□□ -0.31
NR1H3-227ENST00000498548 OR5D13Q8NGL4 314 aa13.14□□□□□ -0.31
NR1H3-227ENST00000498548 OR13C3Q8NGS6 347 aa13.14□□□□□ -0.31
NR1H3-227ENST00000498548 OR4F5Q8NH21 305 aa13.14□□□□□ -0.31
NR1H3-227ENST00000498548 APH1BQ8WW43 257 aa13.14□□□□□ -0.31
NR1H3-227ENST00000498548 PP6455Q8WZ26 134 aa13.14□□□□□ -0.31
NR1H3-227ENST00000498548 EMG1Q92979 244 aaKnown RBP13.14□□□□□ -0.31
NR1H3-227ENST00000498548 C10orf35Q96D05 121 aa13.14□□□□□ -0.31
NR1H3-227ENST00000498548 SPACA5Q96QH8 159 aa13.14□□□□□ -0.31
NR1H3-227ENST00000498548 ZNF649Q9BS31 505 aa13.14□□□□□ -0.31
NR1H3-227ENST00000498548 RBFOX1Q9NWB1 397 aaKnown RBP13.14□□□□□ -0.31
NR1H3-227ENST00000498548 MMP24Q9Y5R2 645 aa13.14□□□□□ -0.31
NR1H3-227ENST00000498548 DSCAML1Q8TD84 2053 aa13.13□□□□□ -0.31
NR1H3-227ENST00000498548 TMEM82A0PJX8 343 aa13.13□□□□□ -0.31
NR1H3-227ENST00000498548 K7N7A8 449 aa13.13□□□□□ -0.31
NR1H3-227ENST00000498548 NDUFA7O95182 113 aa13.13□□□□□ -0.31
NR1H3-227ENST00000498548 CCR9P51686 369 aa13.13□□□□□ -0.31
NR1H3-227ENST00000498548 BMXP51813 675 aa13.13□□□□□ -0.31
NR1H3-227ENST00000498548 EDDM3BP56851 147 aa13.13□□□□□ -0.31
NR1H3-227ENST00000498548 KRTAP10-3P60369 221 aa13.13□□□□□ -0.31
NR1H3-227ENST00000498548 SMN1Q16637 294 aaKnown RBP13.13□□□□□ -0.31
NR1H3-227ENST00000498548 ZNF782Q6ZMW2 699 aaPredicted RBP13.13□□□□□ -0.31
NR1H3-227ENST00000498548 ZNF676Q8N7Q3 588 aa13.13□□□□□ -0.31
NR1H3-227ENST00000498548 AJUBAQ96IF1 538 aa13.13□□□□□ -0.31
NR1H3-227ENST00000498548 Q96MT0 163 aa13.13□□□□□ -0.31
NR1H3-227ENST00000498548 SLITRK2Q9H156 845 aa13.13□□□□□ -0.31
NR1H3-227ENST00000498548 ERVK13-1Q9NX77 482 aa13.13□□□□□ -0.31
NR1H3-227ENST00000498548 HHLA2Q9UM44 414 aa13.13□□□□□ -0.31
NR1H3-227ENST00000498548 CLPSL1A2RUU4 121 aa13.12□□□□□ -0.31
NR1H3-227ENST00000498548 MPZL2O60487 215 aa13.12□□□□□ -0.31
NR1H3-227ENST00000498548 ZNF737O75373 536 aa13.12□□□□□ -0.31
NR1H3-227ENST00000498548 CLIC3O95833 236 aa13.12□□□□□ -0.31
NR1H3-227ENST00000498548 HAND1O96004 215 aa13.12□□□□□ -0.31
NR1H3-227ENST00000498548 IGHA1P01876 353 aa13.12□□□□□ -0.31
NR1H3-227ENST00000498548 PRKACAP17612 351 aa13.12□□□□□ -0.31
NR1H3-227ENST00000498548 PRKACBP22694 351 aa13.12□□□□□ -0.31
NR1H3-227ENST00000498548 ACTA2P62736 377 aa13.12□□□□□ -0.31
NR1H3-227ENST00000498548 ACTG2P63267 376 aa13.12□□□□□ -0.31
NR1H3-227ENST00000498548 ACSM1Q08AH1 577 aa13.12□□□□□ -0.31
NR1H3-227ENST00000498548 EDDM3AQ14507 147 aa13.12□□□□□ -0.31
NR1H3-227ENST00000498548 LY6EQ16553 131 aa13.12□□□□□ -0.31
NR1H3-227ENST00000498548 LRRC36Q1X8D7 754 aa13.12□□□□□ -0.31
NR1H3-227ENST00000498548 Q6ZSV7 163 aa13.12□□□□□ -0.31
NR1H3-227ENST00000498548 UTS2BQ765I0 119 aa13.12□□□□□ -0.31
NR1H3-227ENST00000498548 TPRX1Q8N7U7 411 aa13.12□□□□□ -0.31
NR1H3-227ENST00000498548 DNAAF1Q8NEP3 725 aa13.12□□□□□ -0.31
NR1H3-227ENST00000498548 OR52N4Q8NGI2 321 aa13.12□□□□□ -0.31
NR1H3-227ENST00000498548 OR5D18Q8NGL1 313 aa13.12□□□□□ -0.31
NR1H3-227ENST00000498548 OR13C9Q8NGT0 318 aa13.12□□□□□ -0.31
NR1H3-227ENST00000498548 SNX22Q96L94 193 aa13.12□□□□□ -0.31
NR1H3-227ENST00000498548 SSX3Q99909 188 aa13.12□□□□□ -0.31
NR1H3-227ENST00000498548 CHST6Q9GZX3 395 aa13.12□□□□□ -0.31
NR1H3-227ENST00000498548 FAM234AQ9H0X4 552 aa13.12□□□□□ -0.31
NR1H3-227ENST00000498548 RNF114Q9Y508 228 aa13.12□□□□□ -0.31
NR1H3-227ENST00000498548 IGKV1-12A0A0C4DH73 117 aa13.11□□□□□ -0.31
NR1H3-227ENST00000498548 A0A1W2PPH5 198 aa13.11□□□□□ -0.31
NR1H3-227ENST00000498548 BTBD17A6NE02 478 aa13.11□□□□□ -0.31
NR1H3-227ENST00000498548 FADS2O95864 444 aaKnown RBP13.11□□□□□ -0.31
NR1H3-227ENST00000498548 IGKV1D-12P01611 117 aa13.11□□□□□ -0.31
NR1H3-227ENST00000498548 OCM2P0CE71 109 aa13.11□□□□□ -0.31
NR1H3-227ENST00000498548 OCMP0CE72 109 aaPredicted RBP13.11□□□□□ -0.31
NR1H3-227ENST00000498548 GTF2A1P52655 376 aaPredicted RBP13.11□□□□□ -0.31
NR1H3-227ENST00000498548 DLX6P56179 175 aa13.11□□□□□ -0.31
NR1H3-227ENST00000498548 PDZK1IP1Q13113 114 aa13.11□□□□□ -0.31
NR1H3-227ENST00000498548 LPCAT4Q643R3 524 aa13.11□□□□□ -0.31
NR1H3-227ENST00000498548 GDPGP1Q6ZNW5 385 aa13.11□□□□□ -0.31
NR1H3-227ENST00000498548 C17orf107Q6ZR85 190 aa13.11□□□□□ -0.31
NR1H3-227ENST00000498548 LHFPL2Q6ZUX7 228 aa13.11□□□□□ -0.31
NR1H3-227ENST00000498548 GDPD3Q7L5L3 318 aa13.11□□□□□ -0.31
NR1H3-227ENST00000498548 FAM58AQ8N1B3 248 aa13.11□□□□□ -0.31
NR1H3-227ENST00000498548 ZNF555Q8NEP9 628 aa13.11□□□□□ -0.31
NR1H3-227ENST00000498548 LINC01006Q8NI28 216 aa13.11□□□□□ -0.31
NR1H3-227ENST00000498548 WFDC12Q8WWY7 111 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms