RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 CCL13Q99616 98 aa13.33□□□□□ -0.28
SSBP1-214ENST00000498107 LPAR2Q9HBW0 351 aa13.33□□□□□ -0.28
SSBP1-214ENST00000498107 SF3B6Q9Y3B4 125 aaKnown RBP13.33□□□□□ -0.28
SSBP1-214ENST00000498107 MALRD1Q5VYJ5 2156 aa13.32□□□□□ -0.28
SSBP1-214ENST00000498107 A0A0G2JMP0 313 aa13.32□□□□□ -0.28
SSBP1-214ENST00000498107 A0A0X1KG70 313 aa13.32□□□□□ -0.28
SSBP1-214ENST00000498107 ANGPTL7O43827 346 aa13.32□□□□□ -0.28
SSBP1-214ENST00000498107 KDM4BO94953 1096 aa13.32□□□□□ -0.28
SSBP1-214ENST00000498107 INMTO95050 263 aa13.32□□□□□ -0.28
SSBP1-214ENST00000498107 ECDO95905 644 aaPredicted RBP13.32□□□□□ -0.28
SSBP1-214ENST00000498107 MAS1P04201 325 aa13.32□□□□□ -0.28
SSBP1-214ENST00000498107 SRMP19623 302 aa13.32□□□□□ -0.28
SSBP1-214ENST00000498107 PTGFRP43088 359 aa13.32□□□□□ -0.28
SSBP1-214ENST00000498107 RANBP1P43487 201 aa13.32□□□□□ -0.28
SSBP1-214ENST00000498107 ZP1P60852 638 aa13.32□□□□□ -0.28
SSBP1-214ENST00000498107 LCN2P80188 198 aa13.32□□□□□ -0.28
SSBP1-214ENST00000498107 NEDD8Q15843 81 aa13.32□□□□□ -0.28
SSBP1-214ENST00000498107 SSX1Q16384 188 aa13.32□□□□□ -0.28
SSBP1-214ENST00000498107 SPIN3Q5JUX0 258 aa13.32□□□□□ -0.28
SSBP1-214ENST00000498107 SYT6Q5T7P8 510 aaPredicted RBP13.32□□□□□ -0.28
SSBP1-214ENST00000498107 ZNF788Q6ZQV5 615 aa13.32□□□□□ -0.28
SSBP1-214ENST00000498107 JAGN1Q8N5M9 183 aa13.32□□□□□ -0.28
SSBP1-214ENST00000498107 OR4M2Q8NGB6 313 aa13.32□□□□□ -0.28
SSBP1-214ENST00000498107 FAM192AQ9GZU8 254 aa13.32□□□□□ -0.28
SSBP1-214ENST00000498107 SEBOXQ9HB31 216 aaPredicted RBP13.32□□□□□ -0.28
SSBP1-214ENST00000498107 HIF1ANQ9NWT6 349 aa13.32□□□□□ -0.28
SSBP1-214ENST00000498107 TMEM160Q9NX00 188 aa13.32□□□□□ -0.28
SSBP1-214ENST00000498107 TRDV1A0A1B0GX56 115 aa13.31□□□□□ -0.28
SSBP1-214ENST00000498107 RFPL4AA6NLU0 287 aa13.31□□□□□ -0.28
SSBP1-214ENST00000498107 RFPL4AL1F8VTS6 287 aa13.31□□□□□ -0.28
SSBP1-214ENST00000498107 GABRPO00591 440 aa13.31□□□□□ -0.28
SSBP1-214ENST00000498107 DVL1O14640 695 aa13.31□□□□□ -0.28
SSBP1-214ENST00000498107 SIGLEC5O15389 551 aa13.31□□□□□ -0.28
SSBP1-214ENST00000498107 ZNF780AO75290 641 aaPredicted RBP13.31□□□□□ -0.28
SSBP1-214ENST00000498107 BCL3P20749 454 aa13.31□□□□□ -0.28
SSBP1-214ENST00000498107 PRDX2P32119 198 aa13.31□□□□□ -0.28
SSBP1-214ENST00000498107 MTNR1BP49286 362 aa13.31□□□□□ -0.28
SSBP1-214ENST00000498107 SEC61A1P61619 476 aaKnown RBP13.31□□□□□ -0.28
SSBP1-214ENST00000498107 FABP5Q01469 135 aa13.31□□□□□ -0.28
SSBP1-214ENST00000498107 GPR176Q14439 515 aa13.31□□□□□ -0.28
SSBP1-214ENST00000498107 INSL4Q14641 139 aa13.31□□□□□ -0.28
SSBP1-214ENST00000498107 RSU1Q15404 277 aa13.31□□□□□ -0.28
SSBP1-214ENST00000498107 GLT8D1Q68CQ7 371 aa13.31□□□□□ -0.28
SSBP1-214ENST00000498107 ZNF841Q6ZN19 808 aa13.31□□□□□ -0.28
SSBP1-214ENST00000498107 TMEM91Q6ZNR0 172 aa13.31□□□□□ -0.28
SSBP1-214ENST00000498107 ZNF561Q8N587 486 aa13.31□□□□□ -0.28
SSBP1-214ENST00000498107 TEX29Q8N6K0 151 aa13.31□□□□□ -0.28
SSBP1-214ENST00000498107 SDSLQ96GA7 329 aa13.31□□□□□ -0.28
SSBP1-214ENST00000498107 UQCC2Q9BRT2 126 aa13.31□□□□□ -0.28
SSBP1-214ENST00000498107 METTL9Q9H1A3 318 aa13.31□□□□□ -0.28
SSBP1-214ENST00000498107 ELL3Q9HB65 397 aaPredicted RBP13.31□□□□□ -0.28
SSBP1-214ENST00000498107 HMG20AQ9NP66 347 aa13.31□□□□□ -0.28
SSBP1-214ENST00000498107 CTSZQ9UBR2 303 aa13.31□□□□□ -0.28
SSBP1-214ENST00000498107 OR14J1Q9UGF5 321 aa13.31□□□□□ -0.28
SSBP1-214ENST00000498107 ZNF222Q9UK12 451 aa13.31□□□□□ -0.28
SSBP1-214ENST00000498107 WNK2Q9Y3S1 2297 aa13.3□□□□□ -0.28
SSBP1-214ENST00000498107 IGKV1D-17A0A075B6S4 117 aa13.3□□□□□ -0.28
SSBP1-214ENST00000498107 J3QLI3 93 aa13.3□□□□□ -0.28
SSBP1-214ENST00000498107 PHF1O43189 567 aaPredicted RBP13.3□□□□□ -0.28
SSBP1-214ENST00000498107 CHRM2P08172 466 aa13.3□□□□□ -0.28
SSBP1-214ENST00000498107 PRKACAP17612 351 aa13.3□□□□□ -0.28
SSBP1-214ENST00000498107 HNF1AP20823 631 aa13.3□□□□□ -0.28
SSBP1-214ENST00000498107 ZFP36P26651 326 aaKnown RBP13.3□□□□□ -0.28
SSBP1-214ENST00000498107 NPBWR2P48146 333 aa13.3□□□□□ -0.28
SSBP1-214ENST00000498107 PSMD7P51665 324 aa13.3□□□□□ -0.28
SSBP1-214ENST00000498107 DCAF12L2Q5VW00 463 aa13.3□□□□□ -0.28
SSBP1-214ENST00000498107 ELP2Q6IA86 826 aa13.3□□□□□ -0.28
SSBP1-214ENST00000498107 CRIP3Q6Q6R5 217 aa13.3□□□□□ -0.28
SSBP1-214ENST00000498107 CD200R1LQ6Q8B3 271 aa13.3□□□□□ -0.28
SSBP1-214ENST00000498107 BTNL3Q6UXE8 466 aa13.3□□□□□ -0.28
SSBP1-214ENST00000498107 ASCL4Q6XD76 172 aa13.3□□□□□ -0.28
SSBP1-214ENST00000498107 FAM216BQ8N7L0 139 aa13.3□□□□□ -0.28
SSBP1-214ENST00000498107 MUL1Q969V5 352 aa13.3□□□□□ -0.28
SSBP1-214ENST00000498107 GAFA1Q96PS6 74 aa13.3□□□□□ -0.28
SSBP1-214ENST00000498107 RBFOX1Q9NWB1 397 aaKnown RBP13.3□□□□□ -0.28
SSBP1-214ENST00000498107 IL36GQ9NZH8 169 aa13.3□□□□□ -0.28
SSBP1-214ENST00000498107 LOC105371242A0A075B767 164 aa13.29□□□□□ -0.28
SSBP1-214ENST00000498107 IGKV1-12A0A0C4DH73 117 aa13.29□□□□□ -0.28
SSBP1-214ENST00000498107 KIAA1324LA8MWY0 1029 aaPredicted RBP13.29□□□□□ -0.28
SSBP1-214ENST00000498107 F8VVB4 439 aa13.29□□□□□ -0.28
SSBP1-214ENST00000498107 F8VWA3 439 aa13.29□□□□□ -0.28
SSBP1-214ENST00000498107 IGKV1D-12P01611 117 aa13.29□□□□□ -0.28
SSBP1-214ENST00000498107 CSTBP04080 98 aaKnown RBP13.29□□□□□ -0.28
SSBP1-214ENST00000498107 LIPFP07098 398 aa13.29□□□□□ -0.28
SSBP1-214ENST00000498107 CALRP27797 417 aaKnown RBP13.29□□□□□ -0.28
SSBP1-214ENST00000498107 OR3A4PP47883 348 aa13.29□□□□□ -0.28
SSBP1-214ENST00000498107 CAV3P56539 151 aa13.29□□□□□ -0.28
SSBP1-214ENST00000498107 IKZF1Q13422 519 aa13.29□□□□□ -0.28
SSBP1-214ENST00000498107 ZNF146Q15072 292 aa13.29□□□□□ -0.28
SSBP1-214ENST00000498107 FAM27D1Q5T7N8 215 aa13.29□□□□□ -0.28
SSBP1-214ENST00000498107 Q71RC1 249 aaPredicted RBP13.29□□□□□ -0.28
SSBP1-214ENST00000498107 RNF144BQ7Z419 303 aa13.29□□□□□ -0.28
SSBP1-214ENST00000498107 BATF2Q8N1L9 274 aa13.29□□□□□ -0.28
SSBP1-214ENST00000498107 CD177Q8N6Q3 437 aa13.29□□□□□ -0.28
SSBP1-214ENST00000498107 RAB40AQ8WXH6 277 aa13.29□□□□□ -0.28
SSBP1-214ENST00000498107 ST8SIA4Q92187 359 aa13.29□□□□□ -0.28
SSBP1-214ENST00000498107 DMRTB1Q96MA1 342 aa13.29□□□□□ -0.28
SSBP1-214ENST00000498107 FAM234AQ9H0X4 552 aa13.29□□□□□ -0.28
SSBP1-214ENST00000498107 SLC25A10Q9UBX3 287 aaPredicted RBP13.29□□□□□ -0.28
SSBP1-214ENST00000498107 LPAR3Q9UBY5 353 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms