RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.38□□□□□ -0.59
CPNE1-227ENST00000498056 NDUFS8O00217 210 aa11.38□□□□□ -0.59
CPNE1-227ENST00000498056 CRTAPO75718 401 aaPredicted RBP11.38□□□□□ -0.59
CPNE1-227ENST00000498056 BPNT1O95861 308 aa11.38□□□□□ -0.59
CPNE1-227ENST00000498056 MPIG6BO95866 241 aa11.38□□□□□ -0.59
CPNE1-227ENST00000498056 UBBP0CG47 229 aa11.38□□□□□ -0.59
CPNE1-227ENST00000498056 ARSBP15848 533 aa11.38□□□□□ -0.59
CPNE1-227ENST00000498056 CFHR2P36980 270 aa11.38□□□□□ -0.59
CPNE1-227ENST00000498056 CEBPDP49716 269 aaPredicted RBP11.38□□□□□ -0.59
CPNE1-227ENST00000498056 DSCR9P59020 149 aa11.38□□□□□ -0.59
CPNE1-227ENST00000498056 MICBQ29980 383 aa11.38□□□□□ -0.59
CPNE1-227ENST00000498056 PIGYQ3MUY2 71 aa11.38□□□□□ -0.59
CPNE1-227ENST00000498056 FAM58AQ8N1B3 248 aa11.38□□□□□ -0.59
CPNE1-227ENST00000498056 MUC20Q8N307 709 aaPredicted RBP11.38□□□□□ -0.59
CPNE1-227ENST00000498056 LGALS14Q8TCE9 139 aa11.38□□□□□ -0.59
CPNE1-227ENST00000498056 SLC25A46Q96AG3 418 aa11.38□□□□□ -0.59
CPNE1-227ENST00000498056 Q96MF0 132 aa11.38□□□□□ -0.59
CPNE1-227ENST00000498056 CST11Q9H112 138 aa11.38□□□□□ -0.59
CPNE1-227ENST00000498056 BANF2Q9H503 90 aa11.38□□□□□ -0.59
CPNE1-227ENST00000498056 IL36GQ9NZH8 169 aa11.38□□□□□ -0.59
CPNE1-227ENST00000498056 NOS1APO75052 506 aaPredicted RBP11.37□□□□□ -0.59
CPNE1-227ENST00000498056 ZNF780AO75290 641 aaPredicted RBP11.37□□□□□ -0.59
CPNE1-227ENST00000498056 LHBP01229 141 aa11.37□□□□□ -0.59
CPNE1-227ENST00000498056 GYPAP02724 150 aa11.37□□□□□ -0.59
CPNE1-227ENST00000498056 TFF1P04155 84 aa11.37□□□□□ -0.59
CPNE1-227ENST00000498056 RPS2P15880 293 aaKnown RBP11.37□□□□□ -0.59
CPNE1-227ENST00000498056 MGMTP16455 207 aa11.37□□□□□ -0.59
CPNE1-227ENST00000498056 GIFP27352 417 aa11.37□□□□□ -0.59
CPNE1-227ENST00000498056 MDH2P40926 338 aaKnown RBP11.37□□□□□ -0.59
CPNE1-227ENST00000498056 FGF12P61328 243 aa11.37□□□□□ -0.59
CPNE1-227ENST00000498056 ERVK11-1P61568 191 aa11.37□□□□□ -0.59
CPNE1-227ENST00000498056 GPR176Q14439 515 aa11.37□□□□□ -0.59
CPNE1-227ENST00000498056 ZNF404Q494X3 552 aa11.37□□□□□ -0.59
CPNE1-227ENST00000498056 SHEQ5VZ18 495 aa11.37□□□□□ -0.59
CPNE1-227ENST00000498056 TEX36Q5VZQ5 186 aa11.37□□□□□ -0.59
CPNE1-227ENST00000498056 OR10K2Q6IF99 312 aa11.37□□□□□ -0.59
CPNE1-227ENST00000498056 FAM166AQ6J272 317 aa11.37□□□□□ -0.59
CPNE1-227ENST00000498056 FAM90A1Q86YD7 464 aa11.37□□□□□ -0.59
CPNE1-227ENST00000498056 KRTAP1-3Q8IUG1 177 aa11.37□□□□□ -0.59
CPNE1-227ENST00000498056 CROCCP3Q8IVE0 287 aa11.37□□□□□ -0.59
CPNE1-227ENST00000498056 OSR2Q8N2R0 312 aa11.37□□□□□ -0.59
CPNE1-227ENST00000498056 OR51D1Q8NGF3 324 aa11.37□□□□□ -0.59
CPNE1-227ENST00000498056 OR5T2Q8NGG2 359 aa11.37□□□□□ -0.59
CPNE1-227ENST00000498056 FAM3DQ96BQ1 224 aa11.37□□□□□ -0.59
CPNE1-227ENST00000498056 C1orf147Q96MC9 270 aaPredicted RBP11.37□□□□□ -0.59
CPNE1-227ENST00000498056 FOXC2Q99958 501 aa11.37□□□□□ -0.59
CPNE1-227ENST00000498056 DCUN1D5Q9BTE7 237 aa11.37□□□□□ -0.59
CPNE1-227ENST00000498056 TMEM59Q9BXS4 323 aa11.37□□□□□ -0.59
CPNE1-227ENST00000498056 HES4Q9HCC6 221 aa11.37□□□□□ -0.59
CPNE1-227ENST00000498056 RASL12Q9NYN1 266 aa11.37□□□□□ -0.59
CPNE1-227ENST00000498056 NDUFA13Q9P0J0 144 aa11.37□□□□□ -0.59
CPNE1-227ENST00000498056 GHRLQ9UBU3 117 aa11.37□□□□□ -0.59
CPNE1-227ENST00000498056 CSMD1Q96PZ7 3565 aa11.36□□□□□ -0.59
CPNE1-227ENST00000498056 OR2AT4A6NND4 320 aa11.36□□□□□ -0.59
CPNE1-227ENST00000498056 KNG1P01042 644 aa11.36□□□□□ -0.59
CPNE1-227ENST00000498056 VSIG8P0DPA2 414 aa11.36□□□□□ -0.59
CPNE1-227ENST00000498056 GTF2F2P13984 249 aa11.36□□□□□ -0.59
CPNE1-227ENST00000498056 SNRPBP14678 240 aaKnown RBP11.36□□□□□ -0.59
CPNE1-227ENST00000498056 MUC1P15941 1255 aaPredicted RBP11.36□□□□□ -0.59
CPNE1-227ENST00000498056 SLC25A16P16260 332 aa11.36□□□□□ -0.59
CPNE1-227ENST00000498056 GABRR1P24046 479 aa11.36□□□□□ -0.59
CPNE1-227ENST00000498056 CFPP27918 469 aa11.36□□□□□ -0.59
CPNE1-227ENST00000498056 DUSP1P28562 367 aa11.36□□□□□ -0.59
CPNE1-227ENST00000498056 SOX6P35712 828 aa11.36□□□□□ -0.59
CPNE1-227ENST00000498056 NR4A2P43354 598 aa11.36□□□□□ -0.59
CPNE1-227ENST00000498056 GABRA2P47869 451 aa11.36□□□□□ -0.59
CPNE1-227ENST00000498056 BMXP51813 675 aa11.36□□□□□ -0.59
CPNE1-227ENST00000498056 RBM11P57052 281 aaKnown RBP11.36□□□□□ -0.59
CPNE1-227ENST00000498056 TMEM33P57088 247 aa11.36□□□□□ -0.59
CPNE1-227ENST00000498056 IKZF1Q13422 519 aa11.36□□□□□ -0.59
CPNE1-227ENST00000498056 UNC119Q13432 240 aa11.36□□□□□ -0.59
CPNE1-227ENST00000498056 KCNJ8Q15842 424 aa11.36□□□□□ -0.59
CPNE1-227ENST00000498056 FOXB2Q5VYV0 432 aa11.36□□□□□ -0.59
CPNE1-227ENST00000498056 STUMQ69YW2 141 aa11.36□□□□□ -0.59
CPNE1-227ENST00000498056 SPICQ8N5J4 248 aa11.36□□□□□ -0.59
CPNE1-227ENST00000498056 TMEM104Q8NE00 496 aa11.36□□□□□ -0.59
CPNE1-227ENST00000498056 SLC25A28Q96A46 364 aa11.36□□□□□ -0.59
CPNE1-227ENST00000498056 BARHL1Q9BZE3 327 aa11.36□□□□□ -0.59
CPNE1-227ENST00000498056 SELENOIQ9C0D9 397 aa11.36□□□□□ -0.59
CPNE1-227ENST00000498056 RHOFQ9HBH0 211 aa11.36□□□□□ -0.59
CPNE1-227ENST00000498056 HMG20AQ9NP66 347 aa11.36□□□□□ -0.59
CPNE1-227ENST00000498056 PCDHB16Q9NRJ7 776 aa11.36□□□□□ -0.59
CPNE1-227ENST00000498056 TMEM272A0A1B0GTI8 110 aa11.35□□□□□ -0.59
CPNE1-227ENST00000498056 RFPL4AA6NLU0 287 aa11.35□□□□□ -0.59
CPNE1-227ENST00000498056 CEACAM18A8MTB9 384 aa11.35□□□□□ -0.59
CPNE1-227ENST00000498056 RFPL4AL1F8VTS6 287 aa11.35□□□□□ -0.59
CPNE1-227ENST00000498056 ZNF701M0R085 212 aaPredicted RBP11.35□□□□□ -0.59
CPNE1-227ENST00000498056 ADAM20O43506 726 aa11.35□□□□□ -0.59
CPNE1-227ENST00000498056 HAND1O96004 215 aa11.35□□□□□ -0.59
CPNE1-227ENST00000498056 PAHP00439 452 aa11.35□□□□□ -0.59
CPNE1-227ENST00000498056 ACAA1P09110 424 aaPredicted RBP11.35□□□□□ -0.59
CPNE1-227ENST00000498056 ZNF44P15621 663 aa11.35□□□□□ -0.59
CPNE1-227ENST00000498056 RANBP1P43487 201 aa11.35□□□□□ -0.59
CPNE1-227ENST00000498056 RORCP51449 518 aa11.35□□□□□ -0.59
CPNE1-227ENST00000498056 CAPZA1P52907 286 aa11.35□□□□□ -0.59
CPNE1-227ENST00000498056 SPIN3Q5JUX0 258 aa11.35□□□□□ -0.59
CPNE1-227ENST00000498056 ELP2Q6IA86 826 aa11.35□□□□□ -0.59
CPNE1-227ENST00000498056 ASCL4Q6XD76 172 aa11.35□□□□□ -0.59
CPNE1-227ENST00000498056 DCDC5Q6ZRR9 648 aa11.35□□□□□ -0.59
CPNE1-227ENST00000498056 DNM1P46Q6ZS02 220 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms