RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 CNBD2Q96M20 576 aa9.32□□□□□ -0.92
ERCC8-208ENST00000497892 GAFA1Q96PS6 74 aa9.32□□□□□ -0.92
ERCC8-208ENST00000497892 ZNF184Q99676 751 aaPredicted RBP9.32□□□□□ -0.92
ERCC8-208ENST00000497892 MRI1Q9BV20 369 aa9.32□□□□□ -0.92
ERCC8-208ENST00000497892 MND1Q9BWT6 205 aa9.32□□□□□ -0.92
ERCC8-208ENST00000497892 DUSP21Q9H596 190 aa9.32□□□□□ -0.92
ERCC8-208ENST00000497892 ERGIC3Q9Y282 383 aa9.32□□□□□ -0.92
ERCC8-208ENST00000497892 ZNF281Q9Y2X9 895 aa9.32□□□□□ -0.92
ERCC8-208ENST00000497892 TPRKBQ9Y3C4 175 aa9.32□□□□□ -0.92
ERCC8-208ENST00000497892 SIGLEC5O15389 551 aa9.31□□□□□ -0.92
ERCC8-208ENST00000497892 NDUFB3O43676 98 aa9.31□□□□□ -0.92
ERCC8-208ENST00000497892 ECDO95905 644 aaPredicted RBP9.31□□□□□ -0.92
ERCC8-208ENST00000497892 PLATP00750 562 aa9.31□□□□□ -0.92
ERCC8-208ENST00000497892 IFNA2P01563 188 aa9.31□□□□□ -0.92
ERCC8-208ENST00000497892 TFF1P04155 84 aa9.31□□□□□ -0.92
ERCC8-208ENST00000497892 PPIAL4GP0DN37 164 aa9.31□□□□□ -0.92
ERCC8-208ENST00000497892 SELLP14151 372 aa9.31□□□□□ -0.92
ERCC8-208ENST00000497892 ADRA2CP18825 462 aa9.31□□□□□ -0.92
ERCC8-208ENST00000497892 CRHBPP24387 322 aa9.31□□□□□ -0.92
ERCC8-208ENST00000497892 SOX2P48431 317 aa9.31□□□□□ -0.92
ERCC8-208ENST00000497892 RPS11P62280 158 aaKnown RBP eCLIP9.31□□□□□ -0.92
ERCC8-208ENST00000497892 BDH1Q02338 343 aa9.31□□□□□ -0.92
ERCC8-208ENST00000497892 IKZF1Q13422 519 aa9.31□□□□□ -0.92
ERCC8-208ENST00000497892 IRF3Q14653 427 aa9.31□□□□□ -0.92
ERCC8-208ENST00000497892 DGUOKQ16854 277 aa9.31□□□□□ -0.92
ERCC8-208ENST00000497892 YIF1BQ5BJH7 314 aa9.31□□□□□ -0.92
ERCC8-208ENST00000497892 CRIP3Q6Q6R5 217 aa9.31□□□□□ -0.92
ERCC8-208ENST00000497892 FGFRL1Q8N441 504 aa9.31□□□□□ -0.92
ERCC8-208ENST00000497892 ST8SIA4Q92187 359 aa9.31□□□□□ -0.92
ERCC8-208ENST00000497892 TMEM106AQ96A25 262 aa9.31□□□□□ -0.92
ERCC8-208ENST00000497892 SLAMF9Q96A28 289 aa9.31□□□□□ -0.92
ERCC8-208ENST00000497892 SDSLQ96GA7 329 aa9.31□□□□□ -0.92
ERCC8-208ENST00000497892 MED30Q96HR3 178 aa9.31□□□□□ -0.92
ERCC8-208ENST00000497892 NUDT16L1Q9BRJ7 211 aaKnown RBP9.31□□□□□ -0.92
ERCC8-208ENST00000497892 SSBP4Q9BWG4 385 aaPredicted RBP9.31□□□□□ -0.92
ERCC8-208ENST00000497892 RASSF4Q9H2L5 321 aa9.31□□□□□ -0.92
ERCC8-208ENST00000497892 NEK6Q9HC98 313 aa9.31□□□□□ -0.92
ERCC8-208ENST00000497892 MTCH1Q9NZJ7 389 aa9.31□□□□□ -0.92
ERCC8-208ENST00000497892 LSM2Q9Y333 95 aaKnown RBP9.31□□□□□ -0.92
ERCC8-208ENST00000497892 PCDHGB5Q9Y5G0 923 aa9.31□□□□□ -0.92
ERCC8-208ENST00000497892 AUP1Q9Y679 476 aa9.31□□□□□ -0.92
ERCC8-208ENST00000497892 TRBV5-5A0A0J9YX44 114 aa9.3□□□□□ -0.92
ERCC8-208ENST00000497892 F8VVB4 439 aa9.3□□□□□ -0.92
ERCC8-208ENST00000497892 F8VWA3 439 aa9.3□□□□□ -0.92
ERCC8-208ENST00000497892 CYB5AP00167 134 aa9.3□□□□□ -0.92
ERCC8-208ENST00000497892 KNG1P01042 644 aa9.3□□□□□ -0.92
ERCC8-208ENST00000497892 CD1AP06126 327 aa9.3□□□□□ -0.92
ERCC8-208ENST00000497892 LIPFP07098 398 aa9.3□□□□□ -0.92
ERCC8-208ENST00000497892 RAB3AP20336 220 aa9.3□□□□□ -0.92
ERCC8-208ENST00000497892 GABRA2P47869 451 aa9.3□□□□□ -0.92
ERCC8-208ENST00000497892 POU3F4P49335 361 aa9.3□□□□□ -0.92
ERCC8-208ENST00000497892 CAV3P56539 151 aa9.3□□□□□ -0.92
ERCC8-208ENST00000497892 ACSM1Q08AH1 577 aa9.3□□□□□ -0.92
ERCC8-208ENST00000497892 SCGB2A2Q13296 93 aa9.3□□□□□ -0.92
ERCC8-208ENST00000497892 SPHARQ15513 63 aa9.3□□□□□ -0.92
ERCC8-208ENST00000497892 LRRC10Q5BKY1 277 aa9.3□□□□□ -0.92
ERCC8-208ENST00000497892 BTN2A1Q7KYR7 527 aa9.3□□□□□ -0.92
ERCC8-208ENST00000497892 MKXQ8IYA7 352 aa9.3□□□□□ -0.92
ERCC8-208ENST00000497892 Q8IYB0 196 aa9.3□□□□□ -0.92
ERCC8-208ENST00000497892 BATF2Q8N1L9 274 aa9.3□□□□□ -0.92
ERCC8-208ENST00000497892 PNLDC1Q8NA58 520 aaKnown RBP9.3□□□□□ -0.92
ERCC8-208ENST00000497892 OR13C5Q8NGS8 318 aa9.3□□□□□ -0.92
ERCC8-208ENST00000497892 NANPQ8TBE9 248 aa9.3□□□□□ -0.92
ERCC8-208ENST00000497892 UPRTQ96BW1 309 aa9.3□□□□□ -0.92
ERCC8-208ENST00000497892 TAS2R4Q9NYW5 299 aa9.3□□□□□ -0.92
ERCC8-208ENST00000497892 SLC25A10Q9UBX3 287 aaPredicted RBP9.3□□□□□ -0.92
ERCC8-208ENST00000497892 RPUSD1Q9UJJ7 312 aaKnown RBP9.3□□□□□ -0.92
ERCC8-208ENST00000497892 MAB21L2Q9Y586 359 aa9.3□□□□□ -0.92
ERCC8-208ENST00000497892 PNMA8CA0A1B0GUJ8 204 aa9.29□□□□□ -0.92
ERCC8-208ENST00000497892 RFPL4AA6NLU0 287 aa9.29□□□□□ -0.92
ERCC8-208ENST00000497892 RFPL4AL1F8VTS6 287 aa9.29□□□□□ -0.92
ERCC8-208ENST00000497892 SPRY1O43609 319 aaPredicted RBP9.29□□□□□ -0.92
ERCC8-208ENST00000497892 RGS10O43665 173 aa9.29□□□□□ -0.92
ERCC8-208ENST00000497892 HCKP08631 526 aa9.29□□□□□ -0.92
ERCC8-208ENST00000497892 CELP19835 753 aa9.29□□□□□ -0.92
ERCC8-208ENST00000497892 EPHA1P21709 976 aa9.29□□□□□ -0.92
ERCC8-208ENST00000497892 CEBPDP49716 269 aaPredicted RBP9.29□□□□□ -0.92
ERCC8-208ENST00000497892 PDZK1IP1Q13113 114 aa9.29□□□□□ -0.92
ERCC8-208ENST00000497892 KISS1Q15726 138 aa9.29□□□□□ -0.92
ERCC8-208ENST00000497892 Q499Y3 187 aa9.29□□□□□ -0.92
ERCC8-208ENST00000497892 ARMCX4Q5H9R4 360 aa9.29□□□□□ -0.92
ERCC8-208ENST00000497892 KLF17Q5JT82 389 aaPredicted RBP9.29□□□□□ -0.92
ERCC8-208ENST00000497892 RBM48Q5RL73 367 aaKnown RBP9.29□□□□□ -0.92
ERCC8-208ENST00000497892 PRSS48Q7RTY5 328 aa9.29□□□□□ -0.92
ERCC8-208ENST00000497892 RNF144BQ7Z419 303 aa9.29□□□□□ -0.92
ERCC8-208ENST00000497892 SAXO1Q8IYX7 474 aa9.29□□□□□ -0.92
ERCC8-208ENST00000497892 ZNF561Q8N587 486 aa9.29□□□□□ -0.92
ERCC8-208ENST00000497892 CD177Q8N6Q3 437 aa9.29□□□□□ -0.92
ERCC8-208ENST00000497892 ZNRF1Q8ND25 227 aa9.29□□□□□ -0.92
ERCC8-208ENST00000497892 LY6G5BQ8NDX9 201 aa9.29□□□□□ -0.92
ERCC8-208ENST00000497892 TMEM185AQ8NFB2 350 aa9.29□□□□□ -0.92
ERCC8-208ENST00000497892 OR51A2Q8NGJ7 313 aa9.29□□□□□ -0.92
ERCC8-208ENST00000497892 OR5D18Q8NGL1 313 aa9.29□□□□□ -0.92
ERCC8-208ENST00000497892 C8orf46Q8TAG6 207 aa9.29□□□□□ -0.92
ERCC8-208ENST00000497892 RFT1Q96AA3 541 aa9.29□□□□□ -0.92
ERCC8-208ENST00000497892 CPNE2Q96FN4 548 aaPredicted RBP9.29□□□□□ -0.92
ERCC8-208ENST00000497892 DMRTB1Q96MA1 342 aa9.29□□□□□ -0.92
ERCC8-208ENST00000497892 SPACA5Q96QH8 159 aa9.29□□□□□ -0.92
ERCC8-208ENST00000497892 OR5M11Q96RB7 305 aa9.29□□□□□ -0.92
ERCC8-208ENST00000497892 DCTN5Q9BTE1 182 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms