RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 OR2A12Q8NGT7 310 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 DDB2Q92466 427 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 PELI1Q96FA3 418 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 CCDC115Q96NT0 180 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 HIST1H2BLQ99880 126 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 KLK15Q9H2R5 256 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 BPIFA1Q9NP55 256 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 RLIMQ9NVW2 624 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 MED29Q9NX70 200 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 ZNF586Q9NXT0 402 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 BET1LQ9NYM9 111 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 JKAMPQ9P055 326 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 SLC23A2Q9UGH3 650 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 MMP17Q9ULZ9 603 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 SNX10Q9Y5X0 201 aa2.68□□□□□ -1.98
SNRNP48-202ENST00000496946 RREB1Q92766 1687 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 C10orf71Q711Q0 1435 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 RGPD3A6NKT7 1758 aaPredicted RBP2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 RGPD4Q7Z3J3 1758 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 N4BP2Q86UW6 1770 aaPredicted RBP2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 CACNA1SQ13698 1873 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 TRBV4-1A0A0J9YWV2 114 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 A0A1B0GU03 582 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 SPAARA0A1B0GVQ0 90 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 A0A1W2PRS3 328 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 C17orf100A8MU93 164 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 F5H697 171 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 F5H6K3 240 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 MS4A18H0YCH9 400 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 SULT2B1O00204 365 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 CLDN5O00501 218 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 XRCC3O43542 346 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 CHST1O43916 411 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 NUDT3O95989 172 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 NRASP01111 189 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 HPNP05981 417 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 CTSDP07339 412 aaPredicted RBP2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 SOD3P08294 240 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 PGAM2P15259 253 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 NFYBP25208 207 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 NPY1RP25929 384 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 OR10J1P30954 320 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 NTSP30990 170 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 GLRXP35754 106 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 CYP2J2P51589 502 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 NDUFA8P51970 172 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 CTBP2P56545 445 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 CLDN2P57739 230 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 NANOS3P60323 173 aaKnown RBP2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 RPS13P62277 151 aaKnown RBP2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 UBA52P62987 128 aaKnown RBP2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 FABP5Q01469 135 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 AWAT1Q58HT5 328 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 VWA2Q5GFL6 755 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 SOHLH1Q5JUK2 328 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 LY6G5CQ5SRR4 150 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 GLT8D1Q68CQ7 371 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 ZFAND6Q6FIF0 208 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 DUX4L9Q6RFH8 374 aaPredicted RBP2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 PLXDC2Q6UX71 529 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 Q6ZSR9 355 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 LINC00336Q6ZUF6 198 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 MAVSQ7Z434 540 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 PTAR1Q7Z6K3 402 aaPredicted RBP2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 GKN2Q86XP6 184 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 MARCH9Q86YJ5 346 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 UMODL1-AS1Q8N2C9 162 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 GPR32P1Q8NGA4 272 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 OR10V1Q8NGI7 309 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 SYNPRQ8TBG9 265 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 RNF138Q8WVD3 245 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 ZNF419Q96HQ0 510 aaPredicted RBP2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 HSPB9Q9BQS6 159 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 ANAPC13Q9BS18 74 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 CABLES2Q9BTV7 478 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 C20orf27Q9GZN8 174 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 SLC25A31Q9H0C2 315 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 OR51I2Q9H344 312 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 SPANXB1Q9NS25 103 aaPredicted RBP2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 DMAC2Q9NW81 257 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 NAT8BQ9UHF3 227 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 ABT1Q9ULW3 272 aaKnown RBP2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 BOKQ9UMX3 212 aaPredicted RBP2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 LSM4Q9Y4Z0 139 aaKnown RBP2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 MTCL1Q9Y4B5 1905 aaKnown RBP2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 ATP10DQ9P241 1426 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 TRGV11A0A075B6L2 103 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 BORCS7-ASMTA0A0B4J1R7 106 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 A0A0G2JLM5 398 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 SERINC4A6NH21 518 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 C2CD4BA6NLJ0 364 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 M0R2Z0 102 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 SAP18O00422 153 aaKnown RBP2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 ZNF207O43670 478 aaKnown RBP2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 TNFSF13O75888 250 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 CLDN1O95832 211 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 MAS1P04201 325 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 SEMG1P04279 462 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 DBIP07108 87 aaKnown RBP2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 OR4Q2P0C623 313 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms