RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 POC1AQ8NBT0 407 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 DVL3Q92997 716 aaPredicted RBP7.32□□□□□ -1.24
U2AF1-212ENST00000496462 ZDHHC16Q969W1 377 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 ADAT3Q96EY9 351 aaPredicted RBP7.32□□□□□ -1.24
U2AF1-212ENST00000496462 CMSS1Q9BQ75 279 aaKnown RBP7.32□□□□□ -1.24
U2AF1-212ENST00000496462 TRBV23-1A0A0A0MS06 115 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 A0A0A6YYH2 397 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 A0A0G2JMP0 313 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 A0A0X1KG70 313 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 KIR2DS1A0A191URI9 304 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 FAM90A10PA6NDY2 464 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 FAM90A18PA6NE21 464 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 FAM90A16PA6NEW6 464 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 FAM90A20PA6NIJ5 464 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 A6NJ64 397 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 FAM90A8PA6NJQ4 464 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 FAM90A7PA6NKC0 464 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 FAM90A22PA8MWA6 464 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 FAM90A12PA8MX19 464 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 FAM90A5PA8MXJ8 464 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 FAM90A23PA8MXZ1 464 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 SIRPB1O00241 398 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 FAM90A15PP0C7V4 464 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 FAM90A13PP0C7W8 464 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 FAM90A14PP0C7W9 464 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 FAM90A24PP0C7X0 464 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 DANCRP0C864 163 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 GATA3P23771 443 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 PRDX2P32119 198 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 KIR2DS4P43632 304 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 KIR2DS1Q14954 304 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 C11orf91Q3C1V1 193 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 SFRP4Q6FHJ7 346 aaPredicted RBP7.32□□□□□ -1.24
U2AF1-212ENST00000496462 RFLNBQ8N5W9 214 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 C19orf18Q8NEA5 215 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 OR4M2Q8NGB6 313 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 CREB3L1Q96BA8 519 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 SNX22Q96L94 193 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 GINS4Q9BRT9 223 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 OR51E2Q9H255 320 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 SLC25A10Q9UBX3 287 aaPredicted RBP7.32□□□□□ -1.24
U2AF1-212ENST00000496462 A0A1B0GTI1 187 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 OR2AT4A6NND4 320 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 J3QRE1 110 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 AIPO00170 330 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 MGST3O14880 152 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 DIRAS3O95661 229 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 HAND1O96004 215 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 MGMTP16455 207 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 ZNF154Q13106 437 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 ARSJQ5FYB0 599 aaPredicted RBP7.32□□□□□ -1.24
U2AF1-212ENST00000496462 DCAF12L2Q5VW00 463 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 Q6ZTK2 550 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 ZNF561Q8N587 486 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 ITPKCQ96DU7 683 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 RAB3CQ96E17 227 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 DIRAS2Q96HU8 199 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 Q96MF0 132 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 TREM2Q9NZC2 230 aa7.32□□□□□ -1.24
U2AF1-212ENST00000496462 ARID1AO14497 2285 aa7.31□□□□□ -1.24
U2AF1-212ENST00000496462 LOC105371242A0A075B767 164 aa7.31□□□□□ -1.24
U2AF1-212ENST00000496462 TRAV20A0A0B4J274 112 aa7.31□□□□□ -1.24
U2AF1-212ENST00000496462 SPRY1O43609 319 aaPredicted RBP7.31□□□□□ -1.24
U2AF1-212ENST00000496462 CYB5R3P00387 301 aaPredicted RBP7.31□□□□□ -1.24
U2AF1-212ENST00000496462 HPXP02790 462 aa7.31□□□□□ -1.24
U2AF1-212ENST00000496462 PRSS12P56730 875 aa7.31□□□□□ -1.24
U2AF1-212ENST00000496462 DEFA1P59665 94 aa7.31□□□□□ -1.24
U2AF1-212ENST00000496462 DEFA3P59666 94 aa7.31□□□□□ -1.24
U2AF1-212ENST00000496462 MRPS10P82664 201 aaKnown RBP7.31□□□□□ -1.24
U2AF1-212ENST00000496462 SWI5Q1ZZU3 235 aa7.31□□□□□ -1.24
U2AF1-212ENST00000496462 TMEM69Q5SWH9 247 aa7.31□□□□□ -1.24
U2AF1-212ENST00000496462 FAM166AQ6J272 317 aa7.31□□□□□ -1.24
U2AF1-212ENST00000496462 SAMD12Q8N8I0 201 aa7.31□□□□□ -1.24
U2AF1-212ENST00000496462 Q8TCH9 128 aa7.31□□□□□ -1.24
U2AF1-212ENST00000496462 AQP3Q92482 292 aa7.31□□□□□ -1.24
U2AF1-212ENST00000496462 SCGB3A2Q96PL1 93 aa7.31□□□□□ -1.24
U2AF1-212ENST00000496462 PLEKHF2Q9H8W4 249 aa7.31□□□□□ -1.24
U2AF1-212ENST00000496462 YAE1D1Q9NRH1 226 aa7.31□□□□□ -1.24
U2AF1-212ENST00000496462 ONECUT1Q9UBC0 465 aa7.31□□□□□ -1.24
U2AF1-212ENST00000496462 MAP1AP78559 2803 aaPredicted RBP7.31□□□□□ -1.24
U2AF1-212ENST00000496462 HEATR1Q9H583 2144 aaKnown RBP7.31□□□□□ -1.24
U2AF1-212ENST00000496462 MEIKINA0A087WXM9 373 aa7.31□□□□□ -1.24
U2AF1-212ENST00000496462 CTXN2P0C2S0 81 aa7.31□□□□□ -1.24
U2AF1-212ENST00000496462 TSPAN5P62079 268 aa7.31□□□□□ -1.24
U2AF1-212ENST00000496462 TMEM30BQ3MIR4 351 aa7.31□□□□□ -1.24
U2AF1-212ENST00000496462 SPACA5Q96QH8 159 aa7.31□□□□□ -1.24
U2AF1-212ENST00000496462 FAM234AQ9H0X4 552 aa7.31□□□□□ -1.24
U2AF1-212ENST00000496462 ZNF286AQ9HBT8 521 aa7.31□□□□□ -1.24
U2AF1-212ENST00000496462 ZNF701Q9NV72 531 aaPredicted RBP7.31□□□□□ -1.24
U2AF1-212ENST00000496462 GNG12Q9UBI6 72 aa7.31□□□□□ -1.24
U2AF1-212ENST00000496462 PIGBOS1A0A0B4J2F0 54 aa7.31□□□□□ -1.24
U2AF1-212ENST00000496462 TMEM178BH3BS89 294 aa7.31□□□□□ -1.24
U2AF1-212ENST00000496462 ANGPTL7O43827 346 aa7.31□□□□□ -1.24
U2AF1-212ENST00000496462 TGFAP01135 160 aa7.31□□□□□ -1.24
U2AF1-212ENST00000496462 EPHA1P21709 976 aa7.31□□□□□ -1.24
U2AF1-212ENST00000496462 DYNC1I2Q13409 638 aaKnown RBP7.31□□□□□ -1.24
U2AF1-212ENST00000496462 SFXN4Q6P4A7 337 aa7.31□□□□□ -1.24
U2AF1-212ENST00000496462 OR13C5Q8NGS8 318 aa7.31□□□□□ -1.24
U2AF1-212ENST00000496462 S100ZQ8WXG8 99 aa7.31□□□□□ -1.24
U2AF1-212ENST00000496462 SSBP3Q9BWW4 388 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms