RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 PSG2P11465 335 aa14.27□□□□□ -0.13
HDAC6-235ENST00000495515 BCL3P20749 454 aa14.27□□□□□ -0.13
HDAC6-235ENST00000495515 FGF9P31371 208 aaPredicted RBP14.27□□□□□ -0.13
HDAC6-235ENST00000495515 MTNR1BP49286 362 aa14.27□□□□□ -0.13
HDAC6-235ENST00000495515 GNB2P62879 340 aa14.27□□□□□ -0.13
HDAC6-235ENST00000495515 IL13RA1P78552 427 aa14.27□□□□□ -0.13
HDAC6-235ENST00000495515 GPR176Q14439 515 aa14.27□□□□□ -0.13
HDAC6-235ENST00000495515 CRIP3Q6Q6R5 217 aa14.27□□□□□ -0.13
HDAC6-235ENST00000495515 LYPD2Q6UXB3 125 aa14.27□□□□□ -0.13
HDAC6-235ENST00000495515 CLEC9AQ6UXN8 241 aa14.27□□□□□ -0.13
HDAC6-235ENST00000495515 RNF144BQ7Z419 303 aa14.27□□□□□ -0.13
HDAC6-235ENST00000495515 BATF2Q8N1L9 274 aa14.27□□□□□ -0.13
HDAC6-235ENST00000495515 MSI2Q96DH6 328 aaKnown RBP14.27□□□□□ -0.13
HDAC6-235ENST00000495515 CCL13Q99616 98 aa14.27□□□□□ -0.13
HDAC6-235ENST00000495515 SSBP3Q9BWW4 388 aaPredicted RBP14.27□□□□□ -0.13
HDAC6-235ENST00000495515 METTL9Q9H1A3 318 aa14.27□□□□□ -0.13
HDAC6-235ENST00000495515 PPIL3Q9H2H8 161 aaKnown RBP14.27□□□□□ -0.13
HDAC6-235ENST00000495515 RBFOX1Q9NWB1 397 aaKnown RBP14.27□□□□□ -0.13
HDAC6-235ENST00000495515 ING4Q9UNL4 249 aa14.27□□□□□ -0.13
HDAC6-235ENST00000495515 IGKV1-12A0A0C4DH73 117 aa14.26□□□□□ -0.13
HDAC6-235ENST00000495515 RFPL4AA6NLU0 287 aa14.26□□□□□ -0.13
HDAC6-235ENST00000495515 RFPL4AL1F8VTS6 287 aa14.26□□□□□ -0.13
HDAC6-235ENST00000495515 NDUFB3O43676 98 aa14.26□□□□□ -0.13
HDAC6-235ENST00000495515 IGKV1D-12P01611 117 aa14.26□□□□□ -0.13
HDAC6-235ENST00000495515 CSTBP04080 98 aaKnown RBP14.26□□□□□ -0.13
HDAC6-235ENST00000495515 PRKACAP17612 351 aa14.26□□□□□ -0.13
HDAC6-235ENST00000495515 PRDX2P32119 198 aa14.26□□□□□ -0.13
HDAC6-235ENST00000495515 OR3A4PP47883 348 aa14.26□□□□□ -0.13
HDAC6-235ENST00000495515 NPBWR2P48146 333 aa14.26□□□□□ -0.13
HDAC6-235ENST00000495515 C11orf91Q3C1V1 193 aa14.26□□□□□ -0.13
HDAC6-235ENST00000495515 LRRC10Q5BKY1 277 aa14.26□□□□□ -0.13
HDAC6-235ENST00000495515 SPIN3Q5JUX0 258 aa14.26□□□□□ -0.13
HDAC6-235ENST00000495515 C22orf42Q6IC83 251 aa14.26□□□□□ -0.13
HDAC6-235ENST00000495515 ASCL4Q6XD76 172 aa14.26□□□□□ -0.13
HDAC6-235ENST00000495515 ZNF788Q6ZQV5 615 aa14.26□□□□□ -0.13
HDAC6-235ENST00000495515 LRRTM1Q86UE6 522 aa14.26□□□□□ -0.13
HDAC6-235ENST00000495515 GLCCI1Q86VQ1 547 aa14.26□□□□□ -0.13
HDAC6-235ENST00000495515 CNTD2Q9H8S5 307 aa14.26□□□□□ -0.13
HDAC6-235ENST00000495515 HMG20AQ9NP66 347 aa14.26□□□□□ -0.13
HDAC6-235ENST00000495515 IL36GQ9NZH8 169 aa14.26□□□□□ -0.13
HDAC6-235ENST00000495515 OR14J1Q9UGF5 321 aa14.26□□□□□ -0.13
HDAC6-235ENST00000495515 OR5V1Q9UGF6 321 aa14.26□□□□□ -0.13
HDAC6-235ENST00000495515 MRPS28Q9Y2Q9 187 aaKnown RBP14.26□□□□□ -0.13
HDAC6-235ENST00000495515 IGKV1D-17A0A075B6S4 117 aa14.25□□□□□ -0.13
HDAC6-235ENST00000495515 TRAV1-2A0A0B4J238 106 aa14.25□□□□□ -0.13
HDAC6-235ENST00000495515 TRAV20A0A0B4J274 112 aa14.25□□□□□ -0.13
HDAC6-235ENST00000495515 A8MXK9 166 aa14.25□□□□□ -0.13
HDAC6-235ENST00000495515 F8VVB4 439 aa14.25□□□□□ -0.13
HDAC6-235ENST00000495515 F8VWA3 439 aa14.25□□□□□ -0.13
HDAC6-235ENST00000495515 GPR37O15354 613 aa14.25□□□□□ -0.13
HDAC6-235ENST00000495515 SIGLEC5O15389 551 aa14.25□□□□□ -0.13
HDAC6-235ENST00000495515 LY6G6DO95868 133 aa14.25□□□□□ -0.13
HDAC6-235ENST00000495515 SMIM18P0DKX4 95 aa14.25□□□□□ -0.13
HDAC6-235ENST00000495515 ZNF16P17020 682 aaPredicted RBP14.25□□□□□ -0.13
HDAC6-235ENST00000495515 ADRA2CP18825 462 aa14.25□□□□□ -0.13
HDAC6-235ENST00000495515 CD276Q5ZPR3 534 aa14.25□□□□□ -0.13
HDAC6-235ENST00000495515 WDR25Q64LD2 544 aaPredicted RBP14.25□□□□□ -0.13
HDAC6-235ENST00000495515 AWAT2Q6E213 333 aa14.25□□□□□ -0.13
HDAC6-235ENST00000495515 ELP2Q6IA86 826 aa14.25□□□□□ -0.13
HDAC6-235ENST00000495515 FAM166AQ6J272 317 aa14.25□□□□□ -0.13
HDAC6-235ENST00000495515 GDPGP1Q6ZNW5 385 aa14.25□□□□□ -0.13
HDAC6-235ENST00000495515 ZNF561Q8N587 486 aa14.25□□□□□ -0.13
HDAC6-235ENST00000495515 SDSLQ96GA7 329 aa14.25□□□□□ -0.13
HDAC6-235ENST00000495515 SEBOXQ9HB31 216 aaPredicted RBP14.25□□□□□ -0.13
HDAC6-235ENST00000495515 LPAR2Q9HBW0 351 aa14.25□□□□□ -0.13
HDAC6-235ENST00000495515 TXNL4BQ9NX01 149 aaKnown RBP14.25□□□□□ -0.13
HDAC6-235ENST00000495515 GHRLQ9UBU3 117 aa14.25□□□□□ -0.13
HDAC6-235ENST00000495515 ZNF222Q9UK12 451 aa14.25□□□□□ -0.13
HDAC6-235ENST00000495515 DVL1O14640 695 aa14.24□□□□□ -0.13
HDAC6-235ENST00000495515 CDRT1O95170 752 aa14.24□□□□□ -0.13
HDAC6-235ENST00000495515 ECDO95905 644 aaPredicted RBP14.24□□□□□ -0.13
HDAC6-235ENST00000495515 SFTPBP07988 381 aa14.24□□□□□ -0.13
HDAC6-235ENST00000495515 CHRM2P08172 466 aa14.24□□□□□ -0.13
HDAC6-235ENST00000495515 UBBP0CG47 229 aa14.24□□□□□ -0.13
HDAC6-235ENST00000495515 DVL1P1P54792 670 aaPredicted RBP14.24□□□□□ -0.13
HDAC6-235ENST00000495515 FGF12P61328 243 aa14.24□□□□□ -0.13
HDAC6-235ENST00000495515 LCN2P80188 198 aa14.24□□□□□ -0.13
HDAC6-235ENST00000495515 IKZF1Q13422 519 aa14.24□□□□□ -0.13
HDAC6-235ENST00000495515 ZNF146Q15072 292 aa14.24□□□□□ -0.13
HDAC6-235ENST00000495515 GLIPR1L1Q6UWM5 242 aa14.24□□□□□ -0.13
HDAC6-235ENST00000495515 C1QL2Q7Z5L3 287 aa14.24□□□□□ -0.13
HDAC6-235ENST00000495515 FAM216BQ8N7L0 139 aa14.24□□□□□ -0.13
HDAC6-235ENST00000495515 TBC1D15Q8TC07 691 aa14.24□□□□□ -0.13
HDAC6-235ENST00000495515 TMEM186Q96B77 213 aa14.24□□□□□ -0.13
HDAC6-235ENST00000495515 KCTD7Q96MP8 289 aa14.24□□□□□ -0.13
HDAC6-235ENST00000495515 GAFA1Q96PS6 74 aa14.24□□□□□ -0.13
HDAC6-235ENST00000495515 SMR3AQ99954 134 aa14.24□□□□□ -0.13
HDAC6-235ENST00000495515 CHCHD6Q9BRQ6 235 aa14.24□□□□□ -0.13
HDAC6-235ENST00000495515 OR51E2Q9H255 320 aa14.24□□□□□ -0.13
HDAC6-235ENST00000495515 PLGRKTQ9HBL7 147 aa14.24□□□□□ -0.13
HDAC6-235ENST00000495515 CTSZQ9UBR2 303 aa14.24□□□□□ -0.13
HDAC6-235ENST00000495515 KCNS2Q9ULS6 477 aa14.24□□□□□ -0.13
HDAC6-235ENST00000495515 POLR3KQ9Y2Y1 108 aaPredicted RBP14.24□□□□□ -0.13
HDAC6-235ENST00000495515 ACANP16112 2415 aa14.23□□□□□ -0.13
HDAC6-235ENST00000495515 PPIAL4CA0A0B4J2A2 164 aa14.23□□□□□ -0.13
HDAC6-235ENST00000495515 LOC100506127A0A0U1RQW1 187 aa14.23□□□□□ -0.13
HDAC6-235ENST00000495515 SH2D1BO14796 132 aa14.23□□□□□ -0.13
HDAC6-235ENST00000495515 PHF1O43189 567 aaPredicted RBP14.23□□□□□ -0.13
HDAC6-235ENST00000495515 HTR3BO95264 441 aa14.23□□□□□ -0.13
HDAC6-235ENST00000495515 HAND1O96004 215 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms