RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 MOB1AQ9H8S9 216 aa11□□□□□ -0.65
ERCC3-209ENST00000494464 BRD7Q9NPI1 651 aa11□□□□□ -0.65
ERCC3-209ENST00000494464 ABRACLQ9P1F3 81 aa11□□□□□ -0.65
ERCC3-209ENST00000494464 COMMD3Q9UBI1 195 aa11□□□□□ -0.65
ERCC3-209ENST00000494464 CLN8Q9UBY8 286 aa11□□□□□ -0.65
ERCC3-209ENST00000494464 DAPK2Q9UIK4 370 aa11□□□□□ -0.65
ERCC3-209ENST00000494464 AUP1Q9Y679 476 aa11□□□□□ -0.65
ERCC3-209ENST00000494464 TRAV38-1A0A0B4J264 116 aa10.99□□□□□ -0.65
ERCC3-209ENST00000494464 IGHV2-70DA0A0C4DH43 119 aa10.99□□□□□ -0.65
ERCC3-209ENST00000494464 FABP12A6NFH5 140 aa10.99□□□□□ -0.65
ERCC3-209ENST00000494464 OOEPA6NGQ2 149 aa10.99□□□□□ -0.65
ERCC3-209ENST00000494464 ACOD1A6NK06 481 aa10.99□□□□□ -0.65
ERCC3-209ENST00000494464 A6NLC8 198 aa10.99□□□□□ -0.65
ERCC3-209ENST00000494464 LHBP01229 141 aa10.99□□□□□ -0.65
ERCC3-209ENST00000494464 ISG15P05161 165 aa10.99□□□□□ -0.65
ERCC3-209ENST00000494464 SRMP19623 302 aa10.99□□□□□ -0.65
ERCC3-209ENST00000494464 CFPP27918 469 aa10.99□□□□□ -0.65
ERCC3-209ENST00000494464 GNALP38405 381 aa10.99□□□□□ -0.65
ERCC3-209ENST00000494464 NPY4RP50391 375 aa10.99□□□□□ -0.65
ERCC3-209ENST00000494464 PAX8Q06710 450 aa10.99□□□□□ -0.65
ERCC3-209ENST00000494464 MFGE8Q08431 387 aaPredicted RBP10.99□□□□□ -0.65
ERCC3-209ENST00000494464 IDNKQ5T6J7 187 aa10.99□□□□□ -0.65
ERCC3-209ENST00000494464 WDR25Q64LD2 544 aaPredicted RBP10.99□□□□□ -0.65
ERCC3-209ENST00000494464 STEAP3Q658P3 488 aa10.99□□□□□ -0.65
ERCC3-209ENST00000494464 FAM131AQ6UXB0 335 aa10.99□□□□□ -0.65
ERCC3-209ENST00000494464 BTNL3Q6UXE8 466 aa10.99□□□□□ -0.65
ERCC3-209ENST00000494464 ZNF841Q6ZN19 808 aa10.99□□□□□ -0.65
ERCC3-209ENST00000494464 SNX29P2Q8IUI4 249 aa10.99□□□□□ -0.65
ERCC3-209ENST00000494464 GCSAMQ8N6F7 178 aa10.99□□□□□ -0.65
ERCC3-209ENST00000494464 SETD6Q8TBK2 473 aa10.99□□□□□ -0.65
ERCC3-209ENST00000494464 RAB40AQ8WXH6 277 aa10.99□□□□□ -0.65
ERCC3-209ENST00000494464 ITPKCQ96DU7 683 aa10.99□□□□□ -0.65
ERCC3-209ENST00000494464 DIRAS2Q96HU8 199 aa10.99□□□□□ -0.65
ERCC3-209ENST00000494464 CMTM3Q96MX0 182 aa10.99□□□□□ -0.65
ERCC3-209ENST00000494464 JMJD8Q96S16 334 aa10.99□□□□□ -0.65
ERCC3-209ENST00000494464 PAPOLGQ9BWT3 736 aaKnown RBP10.99□□□□□ -0.65
ERCC3-209ENST00000494464 TLNRD1Q9H1K6 362 aa10.99□□□□□ -0.65
ERCC3-209ENST00000494464 ABCB10Q9NRK6 738 aa10.99□□□□□ -0.65
ERCC3-209ENST00000494464 C1orf123Q9NWV4 160 aa10.99□□□□□ -0.65
ERCC3-209ENST00000494464 FAM206AQ9NX38 181 aa10.99□□□□□ -0.65
ERCC3-209ENST00000494464 MPC1Q9Y5U8 109 aa10.99□□□□□ -0.65
ERCC3-209ENST00000494464 DOCK11Q5JSL3 2073 aa10.99□□□□□ -0.65
ERCC3-209ENST00000494464 A0A0U1RQV5 110 aa10.98□□□□□ -0.65
ERCC3-209ENST00000494464 ANXA2P2A6NMY6 339 aa10.98□□□□□ -0.65
ERCC3-209ENST00000494464 NDUFA2O43678 99 aa10.98□□□□□ -0.65
ERCC3-209ENST00000494464 HPGDSO60760 199 aa10.98□□□□□ -0.65
ERCC3-209ENST00000494464 PTTG1O95997 202 aa10.98□□□□□ -0.65
ERCC3-209ENST00000494464 CST4P01036 141 aa10.98□□□□□ -0.65
ERCC3-209ENST00000494464 GRPP07492 148 aa10.98□□□□□ -0.65
ERCC3-209ENST00000494464 OCMP0CE72 109 aaPredicted RBP10.98□□□□□ -0.65
ERCC3-209ENST00000494464 UBCP0CG48 685 aaKnown RBP10.98□□□□□ -0.65
ERCC3-209ENST00000494464 ACKR3P25106 362 aa10.98□□□□□ -0.65
ERCC3-209ENST00000494464 CD80P33681 288 aa10.98□□□□□ -0.65
ERCC3-209ENST00000494464 DEFA1P59665 94 aa10.98□□□□□ -0.65
ERCC3-209ENST00000494464 DEFA3P59666 94 aa10.98□□□□□ -0.65
ERCC3-209ENST00000494464 TRIM16LQ309B1 348 aa10.98□□□□□ -0.65
ERCC3-209ENST00000494464 TEX36Q5VZQ5 186 aa10.98□□□□□ -0.65
ERCC3-209ENST00000494464 CNIH2Q6PI25 160 aa10.98□□□□□ -0.65
ERCC3-209ENST00000494464 LYPD2Q6UXB3 125 aa10.98□□□□□ -0.65
ERCC3-209ENST00000494464 ZNF826PQ6ZT77 177 aa10.98□□□□□ -0.65
ERCC3-209ENST00000494464 KRT74Q7RTS7 529 aa10.98□□□□□ -0.65
ERCC3-209ENST00000494464 BPIFB2Q8N4F0 458 aa10.98□□□□□ -0.65
ERCC3-209ENST00000494464 C19orf18Q8NEA5 215 aa10.98□□□□□ -0.65
ERCC3-209ENST00000494464 OR1M1Q8NGA1 313 aa10.98□□□□□ -0.65
ERCC3-209ENST00000494464 TRMT10AQ8TBZ6 339 aaKnown RBP10.98□□□□□ -0.65
ERCC3-209ENST00000494464 LYZL4Q96KX0 146 aa10.98□□□□□ -0.65
ERCC3-209ENST00000494464 SLC6A7Q99884 636 aa10.98□□□□□ -0.65
ERCC3-209ENST00000494464 CTSZQ9UBR2 303 aa10.98□□□□□ -0.65
ERCC3-209ENST00000494464 NUP50Q9UKX7 468 aa10.98□□□□□ -0.65
ERCC3-209ENST00000494464 RHBDD3Q9Y3P4 386 aa10.98□□□□□ -0.65
ERCC3-209ENST00000494464 hCG_1807616A0A1W2PRN6 198 aa10.97□□□□□ -0.65
ERCC3-209ENST00000494464 TMEM210A6NLX4 147 aa10.97□□□□□ -0.65
ERCC3-209ENST00000494464 C3orf80F5H4A9 247 aa10.97□□□□□ -0.65
ERCC3-209ENST00000494464 AIPO00170 330 aa10.97□□□□□ -0.65
ERCC3-209ENST00000494464 TNFRSF13BO14836 293 aaPredicted RBP10.97□□□□□ -0.65
ERCC3-209ENST00000494464 IGLV3-1P01715 115 aa10.97□□□□□ -0.65
ERCC3-209ENST00000494464 ATF1P18846 271 aa10.97□□□□□ -0.65
ERCC3-209ENST00000494464 FSTP19883 344 aa10.97□□□□□ -0.65
ERCC3-209ENST00000494464 FPR2P25090 351 aa10.97□□□□□ -0.65
ERCC3-209ENST00000494464 CFHR2P36980 270 aa10.97□□□□□ -0.65
ERCC3-209ENST00000494464 PSMD7P51665 324 aa10.97□□□□□ -0.65
ERCC3-209ENST00000494464 SCAND1P57086 179 aa10.97□□□□□ -0.65
ERCC3-209ENST00000494464 HOXA4Q00056 320 aaPredicted RBP10.97□□□□□ -0.65
ERCC3-209ENST00000494464 KLF17Q5JT82 389 aaPredicted RBP10.97□□□□□ -0.65
ERCC3-209ENST00000494464 SFRP4Q6FHJ7 346 aaPredicted RBP10.97□□□□□ -0.65
ERCC3-209ENST00000494464 WDR82Q6UXN9 313 aa10.97□□□□□ -0.65
ERCC3-209ENST00000494464 LRRTM1Q86UE6 522 aa10.97□□□□□ -0.65
ERCC3-209ENST00000494464 C11orf53Q8IXP5 236 aa10.97□□□□□ -0.65
ERCC3-209ENST00000494464 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.97□□□□□ -0.65
ERCC3-209ENST00000494464 UPRTQ96BW1 309 aa10.97□□□□□ -0.65
ERCC3-209ENST00000494464 MICU1Q9BPX6 476 aa10.97□□□□□ -0.65
ERCC3-209ENST00000494464 RTL8AQ9BWD3 113 aa10.97□□□□□ -0.65
ERCC3-209ENST00000494464 PPP1R3EQ9H7J1 279 aa10.97□□□□□ -0.65
ERCC3-209ENST00000494464 TCF7L1Q9HCS4 588 aa10.97□□□□□ -0.65
ERCC3-209ENST00000494464 NUFIP1Q9UHK0 495 aaKnown RBP10.97□□□□□ -0.65
ERCC3-209ENST00000494464 OR52A1Q9UKL2 312 aa10.97□□□□□ -0.65
ERCC3-209ENST00000494464 KIR2DS1A0A191URI9 304 aa10.96□□□□□ -0.65
ERCC3-209ENST00000494464 TMEM269A0A1B0GVZ9 245 aa10.96□□□□□ -0.65
ERCC3-209ENST00000494464 A0A1W2PPK0 400 aa10.96□□□□□ -0.65
ERCC3-209ENST00000494464 IFITM5A6NNB3 132 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms