RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 MTCP1P56278 107 aa12.07□□□□□ -0.48
ATG4B-224ENST00000494132 C11orf91Q3C1V1 193 aa12.07□□□□□ -0.48
ATG4B-224ENST00000494132 UTS2BQ765I0 119 aa12.07□□□□□ -0.48
ATG4B-224ENST00000494132 EGFL6Q8IUX8 553 aa12.07□□□□□ -0.48
ATG4B-224ENST00000494132 CMTM4Q8IZR5 234 aa12.07□□□□□ -0.48
ATG4B-224ENST00000494132 PIP4P2Q8N4L2 257 aa12.07□□□□□ -0.48
ATG4B-224ENST00000494132 ASCC1Q8N9N2 400 aaKnown RBP12.07□□□□□ -0.48
ATG4B-224ENST00000494132 SETD9Q8NE22 299 aa12.07□□□□□ -0.48
ATG4B-224ENST00000494132 RGP1Q92546 391 aaPredicted RBP12.07□□□□□ -0.48
ATG4B-224ENST00000494132 COMMD4Q9H0A8 199 aa12.07□□□□□ -0.48
ATG4B-224ENST00000494132 C8orf4Q9NR00 106 aa12.07□□□□□ -0.48
ATG4B-224ENST00000494132 TRBV2A0A0J9YWF9 115 aa12.06□□□□□ -0.48
ATG4B-224ENST00000494132 HAX1O00165 279 aa12.06□□□□□ -0.48
ATG4B-224ENST00000494132 XPNPEP2O43895 674 aa12.06□□□□□ -0.48
ATG4B-224ENST00000494132 LALBAP00709 142 aa12.06□□□□□ -0.48
ATG4B-224ENST00000494132 KNG1P01042 644 aa12.06□□□□□ -0.48
ATG4B-224ENST00000494132 CCL3L1P16619 93 aa12.06□□□□□ -0.48
ATG4B-224ENST00000494132 DUSP1P28562 367 aa12.06□□□□□ -0.48
ATG4B-224ENST00000494132 SOX2P48431 317 aa12.06□□□□□ -0.48
ATG4B-224ENST00000494132 ERVFRD-1P60508 538 aa12.06□□□□□ -0.48
ATG4B-224ENST00000494132 LAIR2Q6ISS4 152 aa12.06□□□□□ -0.48
ATG4B-224ENST00000494132 LHFPL2Q6ZUX7 228 aa12.06□□□□□ -0.48
ATG4B-224ENST00000494132 ZNF561Q8N587 486 aa12.06□□□□□ -0.48
ATG4B-224ENST00000494132 GGHQ92820 318 aa12.06□□□□□ -0.48
ATG4B-224ENST00000494132 MYCBPQ99417 103 aaPredicted RBP12.06□□□□□ -0.48
ATG4B-224ENST00000494132 NKX3-1Q99801 234 aaPredicted RBP12.06□□□□□ -0.48
ATG4B-224ENST00000494132 DHDHQ9UQ10 334 aa12.06□□□□□ -0.48
ATG4B-224ENST00000494132 SIRT4Q9Y6E7 314 aaPredicted RBP12.06□□□□□ -0.48
ATG4B-224ENST00000494132 IGKV1-12A0A0C4DH73 117 aa12.05□□□□□ -0.48
ATG4B-224ENST00000494132 TMEM89A2RUT3 159 aa12.05□□□□□ -0.48
ATG4B-224ENST00000494132 TMEM212A6NML5 194 aa12.05□□□□□ -0.48
ATG4B-224ENST00000494132 H0YAE9 185 aa12.05□□□□□ -0.48
ATG4B-224ENST00000494132 IGKV1D-12P01611 117 aa12.05□□□□□ -0.48
ATG4B-224ENST00000494132 TK1P04183 234 aa12.05□□□□□ -0.48
ATG4B-224ENST00000494132 MELTFP08582 738 aa12.05□□□□□ -0.48
ATG4B-224ENST00000494132 CCDC159P0C7I6 412 aa12.05□□□□□ -0.48
ATG4B-224ENST00000494132 PRKACAP17612 351 aa12.05□□□□□ -0.48
ATG4B-224ENST00000494132 MYL12AP19105 171 aa12.05□□□□□ -0.48
ATG4B-224ENST00000494132 PRKACBP22694 351 aa12.05□□□□□ -0.48
ATG4B-224ENST00000494132 DCKP27707 260 aa12.05□□□□□ -0.48
ATG4B-224ENST00000494132 RPL31P62899 125 aaKnown RBP12.05□□□□□ -0.48
ATG4B-224ENST00000494132 GABPB1Q06547 395 aaPredicted RBP12.05□□□□□ -0.48
ATG4B-224ENST00000494132 ZNF273Q14593 569 aa12.05□□□□□ -0.48
ATG4B-224ENST00000494132 CRIP3Q6Q6R5 217 aa12.05□□□□□ -0.48
ATG4B-224ENST00000494132 C8orf59Q8N0T1 100 aaPredicted RBP12.05□□□□□ -0.48
ATG4B-224ENST00000494132 KIR3DL3Q8N743 410 aa12.05□□□□□ -0.48
ATG4B-224ENST00000494132 ZFP41Q8N8Y5 198 aa12.05□□□□□ -0.48
ATG4B-224ENST00000494132 DNAAF1Q8NEP3 725 aa12.05□□□□□ -0.48
ATG4B-224ENST00000494132 OR13C5Q8NGS8 318 aa12.05□□□□□ -0.48
ATG4B-224ENST00000494132 TNFRSF14Q92956 283 aa12.05□□□□□ -0.48
ATG4B-224ENST00000494132 SLC25A28Q96A46 364 aa12.05□□□□□ -0.48
ATG4B-224ENST00000494132 ORAI1Q96D31 301 aa12.05□□□□□ -0.48
ATG4B-224ENST00000494132 JAM3Q9BX67 310 aa12.05□□□□□ -0.48
ATG4B-224ENST00000494132 ZCCHC4Q9H5U6 513 aa12.05□□□□□ -0.48
ATG4B-224ENST00000494132 NEK6Q9HC98 313 aa12.05□□□□□ -0.48
ATG4B-224ENST00000494132 DIMT1Q9UNQ2 313 aaKnown RBP12.05□□□□□ -0.48
ATG4B-224ENST00000494132 CAB39Q9Y376 341 aaPredicted RBP12.05□□□□□ -0.48
ATG4B-224ENST00000494132 FBN3Q75N90 2809 aa12.04□□□□□ -0.48
ATG4B-224ENST00000494132 TRBV23-1A0A0A0MS06 115 aa12.04□□□□□ -0.48
ATG4B-224ENST00000494132 TMEM82A0PJX8 343 aa12.04□□□□□ -0.48
ATG4B-224ENST00000494132 HAND1O96004 215 aa12.04□□□□□ -0.48
ATG4B-224ENST00000494132 CYB5AP00167 134 aa12.04□□□□□ -0.48
ATG4B-224ENST00000494132 RNASE1P07998 156 aaKnown RBP12.04□□□□□ -0.48
ATG4B-224ENST00000494132 HCKP08631 526 aa12.04□□□□□ -0.48
ATG4B-224ENST00000494132 EDDM3BP56851 147 aa12.04□□□□□ -0.48
ATG4B-224ENST00000494132 ST3GAL4Q11206 333 aa12.04□□□□□ -0.48
ATG4B-224ENST00000494132 MRPL28Q13084 256 aaKnown RBP12.04□□□□□ -0.48
ATG4B-224ENST00000494132 PDZK1IP1Q13113 114 aa12.04□□□□□ -0.48
ATG4B-224ENST00000494132 IL18R1Q13478 541 aa12.04□□□□□ -0.48
ATG4B-224ENST00000494132 EDDM3AQ14507 147 aa12.04□□□□□ -0.48
ATG4B-224ENST00000494132 CDK5R1Q15078 307 aa12.04□□□□□ -0.48
ATG4B-224ENST00000494132 TMEM200BQ69YZ2 307 aa12.04□□□□□ -0.48
ATG4B-224ENST00000494132 ASPHD2Q6ICH7 369 aa12.04□□□□□ -0.48
ATG4B-224ENST00000494132 Q6YL49 198 aa12.04□□□□□ -0.48
ATG4B-224ENST00000494132 MKXQ8IYA7 352 aa12.04□□□□□ -0.48
ATG4B-224ENST00000494132 FAM58AQ8N1B3 248 aa12.04□□□□□ -0.48
ATG4B-224ENST00000494132 TPRX1Q8N7U7 411 aa12.04□□□□□ -0.48
ATG4B-224ENST00000494132 BPIFB6Q8NFQ5 453 aa12.04□□□□□ -0.48
ATG4B-224ENST00000494132 OR51A2Q8NGJ7 313 aa12.04□□□□□ -0.48
ATG4B-224ENST00000494132 NRG4Q8WWG1 115 aa12.04□□□□□ -0.48
ATG4B-224ENST00000494132 SPSB1Q96BD6 273 aa12.04□□□□□ -0.48
ATG4B-224ENST00000494132 TMEM80Q96HE8 168 aa12.04□□□□□ -0.48
ATG4B-224ENST00000494132 CHST6Q9GZX3 395 aa12.04□□□□□ -0.48
ATG4B-224ENST00000494132 DCLRE1BQ9H816 532 aa12.04□□□□□ -0.48
ATG4B-224ENST00000494132 TAS2R4Q9NYW5 299 aa12.04□□□□□ -0.48
ATG4B-224ENST00000494132 EXOSC1Q9Y3B2 195 aaKnown RBP12.04□□□□□ -0.48
ATG4B-224ENST00000494132 PNMA8CA0A1B0GUJ8 204 aa12.03□□□□□ -0.48
ATG4B-224ENST00000494132 IRGMA1A4Y4 181 aa12.03□□□□□ -0.48
ATG4B-224ENST00000494132 K7N7A8 449 aa12.03□□□□□ -0.48
ATG4B-224ENST00000494132 M0R1W7 72 aa12.03□□□□□ -0.48
ATG4B-224ENST00000494132 SIRPB1O00241 398 aa12.03□□□□□ -0.48
ATG4B-224ENST00000494132 NPFFO15130 113 aa12.03□□□□□ -0.48
ATG4B-224ENST00000494132 SULT1B1O43704 296 aa12.03□□□□□ -0.48
ATG4B-224ENST00000494132 ZNF737O75373 536 aa12.03□□□□□ -0.48
ATG4B-224ENST00000494132 CHRM2P08172 466 aa12.03□□□□□ -0.48
ATG4B-224ENST00000494132 HKR1P10072 659 aa12.03□□□□□ -0.48
ATG4B-224ENST00000494132 OMGP23515 440 aa12.03□□□□□ -0.48
ATG4B-224ENST00000494132 PAX6P26367 422 aa12.03□□□□□ -0.48
ATG4B-224ENST00000494132 CFPP27918 469 aa12.03□□□□□ -0.48
ATG4B-224ENST00000494132 AQP4P55087 323 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms