RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 MBP02144 154 aa1.59□□□□□ -2.15
SMC4-223ENST00000493695 HTR2BP41595 481 aa1.59□□□□□ -2.15
SMC4-223ENST00000493695 TUFMP49411 452 aaKnown RBP1.59□□□□□ -2.15
SMC4-223ENST00000493695 RPL10AP62906 217 aaKnown RBP1.59□□□□□ -2.15
SMC4-223ENST00000493695 IFFO1Q0D2I5 559 aa1.59□□□□□ -2.15
SMC4-223ENST00000493695 IHHQ14623 411 aa1.59□□□□□ -2.15
SMC4-223ENST00000493695 TAL2Q16559 108 aa1.59□□□□□ -2.15
SMC4-223ENST00000493695 CEACAM16Q2WEN9 425 aa1.59□□□□□ -2.15
SMC4-223ENST00000493695 KRTAP13-4Q3LI77 160 aa1.59□□□□□ -2.15
SMC4-223ENST00000493695 ZNF404Q494X3 552 aa1.59□□□□□ -2.15
SMC4-223ENST00000493695 CLEC12AQ5QGZ9 265 aa1.59□□□□□ -2.15
SMC4-223ENST00000493695 LDLRAD2Q5SZI1 272 aa1.59□□□□□ -2.15
SMC4-223ENST00000493695 SYT6Q5T7P8 510 aaPredicted RBP1.59□□□□□ -2.15
SMC4-223ENST00000493695 ITPRIPQ8IWB1 547 aa1.59□□□□□ -2.15
SMC4-223ENST00000493695 CYP4Z2PQ8N1L4 340 aa1.59□□□□□ -2.15
SMC4-223ENST00000493695 OR8A1Q8NGG7 326 aa1.59□□□□□ -2.15
SMC4-223ENST00000493695 OR4A15Q8NGL6 344 aa1.59□□□□□ -2.15
SMC4-223ENST00000493695 ING5Q8WYH8 240 aa1.59□□□□□ -2.15
SMC4-223ENST00000493695 CIDECQ96AQ7 238 aaPredicted RBP1.59□□□□□ -2.15
SMC4-223ENST00000493695 OR2V2Q96R30 315 aa1.59□□□□□ -2.15
SMC4-223ENST00000493695 MRPL20Q9BYC9 149 aaKnown RBP1.59□□□□□ -2.15
SMC4-223ENST00000493695 OR2S2Q9NQN1 319 aa1.59□□□□□ -2.15
SMC4-223ENST00000493695 PARP11Q9NR21 331 aa1.59□□□□□ -2.15
SMC4-223ENST00000493695 AP3M1Q9Y2T2 418 aa1.59□□□□□ -2.15
SMC4-223ENST00000493695 MROH5Q6ZUA9 1318 aa1.59□□□□□ -2.16
SMC4-223ENST00000493695 TNIKQ9UKE5 1360 aa1.59□□□□□ -2.16
SMC4-223ENST00000493695 H3BQ85 93 aa1.58□□□□□ -2.16
SMC4-223ENST00000493695 K7EPK0 472 aa1.58□□□□□ -2.16
SMC4-223ENST00000493695 VAPBO95292 243 aa1.58□□□□□ -2.16
SMC4-223ENST00000493695 CD8AP01732 235 aa1.58□□□□□ -2.16
SMC4-223ENST00000493695 SLC6A1P30531 599 aa1.58□□□□□ -2.16
SMC4-223ENST00000493695 ACOT2P49753 483 aa1.58□□□□□ -2.16
SMC4-223ENST00000493695 ELOCQ15369 112 aa1.58□□□□□ -2.16
SMC4-223ENST00000493695 DEFB134Q4QY38 66 aa1.58□□□□□ -2.16
SMC4-223ENST00000493695 AMMECR1LQ6DCA0 310 aa1.58□□□□□ -2.16
SMC4-223ENST00000493695 FAM19A1Q7Z5A9 133 aa1.58□□□□□ -2.16
SMC4-223ENST00000493695 COMTD1Q86VU5 262 aa1.58□□□□□ -2.16
SMC4-223ENST00000493695 NELFCDQ8IXH7 590 aa1.58□□□□□ -2.16
SMC4-223ENST00000493695 GAPTQ8N292 157 aa1.58□□□□□ -2.16
SMC4-223ENST00000493695 NDNFQ8TB73 568 aa1.58□□□□□ -2.16
SMC4-223ENST00000493695 UBA3Q8TBC4 463 aa1.58□□□□□ -2.16
SMC4-223ENST00000493695 MITD1Q8WV92 249 aa1.58□□□□□ -2.16
SMC4-223ENST00000493695 FAM131CQ96AQ9 280 aa1.58□□□□□ -2.16
SMC4-223ENST00000493695 SMIM8Q96KF7 97 aa1.58□□□□□ -2.16
SMC4-223ENST00000493695 METTL26Q96S19 204 aa1.58□□□□□ -2.16
SMC4-223ENST00000493695 ANP32EQ9BTT0 268 aa1.58□□□□□ -2.16
SMC4-223ENST00000493695 C12orf4Q9NQ89 552 aa1.58□□□□□ -2.16
SMC4-223ENST00000493695 FLVCR2Q9UPI3 526 aa1.58□□□□□ -2.16
SMC4-223ENST00000493695 TENM1Q9UKZ4 2725 aa1.57□□□□□ -2.16
SMC4-223ENST00000493695 SLC5A10A0PJK1 596 aa1.57□□□□□ -2.16
SMC4-223ENST00000493695 OR2AT4A6NND4 320 aa1.57□□□□□ -2.16
SMC4-223ENST00000493695 SEC14L6B5MCN3 397 aa1.57□□□□□ -2.16
SMC4-223ENST00000493695 PRMT5O14744 637 aaPredicted RBP1.57□□□□□ -2.16
SMC4-223ENST00000493695 CPSF4O95639 269 aaKnown RBP1.57□□□□□ -2.16
SMC4-223ENST00000493695 RHOCP08134 193 aa1.57□□□□□ -2.16
SMC4-223ENST00000493695 STAG3L2P0CL84 134 aa1.57□□□□□ -2.16
SMC4-223ENST00000493695 HTR2CP28335 458 aa1.57□□□□□ -2.16
SMC4-223ENST00000493695 FOXA1P55317 472 aa1.57□□□□□ -2.16
SMC4-223ENST00000493695 IL5RAQ01344 420 aa1.57□□□□□ -2.16
SMC4-223ENST00000493695 TNFRSF9Q07011 255 aa1.57□□□□□ -2.16
SMC4-223ENST00000493695 ENDOGQ14249 297 aaKnown RBP1.57□□□□□ -2.16
SMC4-223ENST00000493695 SLC9A3R2Q15599 337 aa1.57□□□□□ -2.16
SMC4-223ENST00000493695 HNRNPA1L2Q32P51 320 aaKnown RBP1.57□□□□□ -2.16
SMC4-223ENST00000493695 NDUFAF6Q330K2 333 aa1.57□□□□□ -2.16
SMC4-223ENST00000493695 HSP90AA4PQ58FG1 418 aa1.57□□□□□ -2.16
SMC4-223ENST00000493695 IDNKQ5T6J7 187 aa1.57□□□□□ -2.16
SMC4-223ENST00000493695 THOC7Q6I9Y2 204 aaKnown RBP1.57□□□□□ -2.16
SMC4-223ENST00000493695 SMARCD3Q6STE5 483 aa1.57□□□□□ -2.16
SMC4-223ENST00000493695 C3orf22Q8N5N4 141 aa1.57□□□□□ -2.16
SMC4-223ENST00000493695 OR52K1Q8NGK4 314 aa1.57□□□□□ -2.16
SMC4-223ENST00000493695 OR13C9Q8NGT0 318 aa1.57□□□□□ -2.16
SMC4-223ENST00000493695 CACNG8Q8WXS5 425 aa1.57□□□□□ -2.16
SMC4-223ENST00000493695 PPP1R36Q96LQ0 422 aa1.57□□□□□ -2.16
SMC4-223ENST00000493695 TM6SF2Q9BZW4 377 aa1.57□□□□□ -2.16
SMC4-223ENST00000493695 SYT4Q9H2B2 425 aa1.57□□□□□ -2.16
SMC4-223ENST00000493695 WDR55Q9H6Y2 383 aaPredicted RBP1.57□□□□□ -2.16
SMC4-223ENST00000493695 RBM22Q9NW64 420 aaKnown RBP eCLIP1.57□□□□□ -2.167e-6■■■■□ 24.6
SMC4-223ENST00000493695 TAC3Q9UHF0 121 aa1.57□□□□□ -2.16
SMC4-223ENST00000493695 V9GYY9 64 aa1.57□□□□□ -2.16
SMC4-223ENST00000493695 SPATA31E1Q6ZUB1 1445 aa1.57□□□□□ -2.16
SMC4-223ENST00000493695 SSH2Q76I76 1423 aa1.57□□□□□ -2.16
SMC4-223ENST00000493695 TRAV8-7A0A075B6U6 113 aa1.56□□□□□ -2.16
SMC4-223ENST00000493695 IGHV3-43A0A0B4J1X8 118 aa1.56□□□□□ -2.16
SMC4-223ENST00000493695 K7EN84 100 aa1.56□□□□□ -2.16
SMC4-223ENST00000493695 FFAR1O14842 300 aa1.56□□□□□ -2.16
SMC4-223ENST00000493695 RNF113AO15541 343 aaKnown RBP1.56□□□□□ -2.16
SMC4-223ENST00000493695 SLC37A4O43826 429 aa1.56□□□□□ -2.16
SMC4-223ENST00000493695 OR2A4O95047 310 aa1.56□□□□□ -2.16
SMC4-223ENST00000493695 LIPCP11150 499 aa1.56□□□□□ -2.16
SMC4-223ENST00000493695 PTHLHP12272 177 aa1.56□□□□□ -2.16
SMC4-223ENST00000493695 FUSP35637 526 aaKnown RBP eCLIP1.56□□□□□ -2.16
SMC4-223ENST00000493695 GPR4P46093 362 aa1.56□□□□□ -2.16
SMC4-223ENST00000493695 NUDT2P50583 147 aa1.56□□□□□ -2.16
SMC4-223ENST00000493695 SLC18A1P54219 525 aa1.56□□□□□ -2.16
SMC4-223ENST00000493695 PRKCDQ05655 676 aa1.56□□□□□ -2.16
SMC4-223ENST00000493695 FMODQ06828 376 aa1.56□□□□□ -2.16
SMC4-223ENST00000493695 Q499Y3 187 aa1.56□□□□□ -2.16
SMC4-223ENST00000493695 PDZD11Q5EBL8 140 aa1.56□□□□□ -2.16
SMC4-223ENST00000493695 SLC25A25Q6KCM7 469 aa1.56□□□□□ -2.16
SMC4-223ENST00000493695 TMEM144Q7Z5S9 345 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms