RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 RPS4Y2Q8TD47 263 aa13.45□□□□□ -0.26
PTPRU-208ENST00000493601 MALSU1Q96EH3 234 aa13.45□□□□□ -0.26
PTPRU-208ENST00000493601 ADI1Q9BV57 179 aa13.45□□□□□ -0.26
PTPRU-208ENST00000493601 CADM1Q9BY67 442 aaKnown RBP13.45□□□□□ -0.26
PTPRU-208ENST00000493601 CHST5Q9GZS9 411 aa13.45□□□□□ -0.26
PTPRU-208ENST00000493601 PITPNC1Q9UKF7 332 aa13.45□□□□□ -0.26
PTPRU-208ENST00000493601 TCF19Q9Y242 345 aa13.45□□□□□ -0.26
PTPRU-208ENST00000493601 METTL15A6NJ78 407 aa13.44□□□□□ -0.26
PTPRU-208ENST00000493601 SULT1C4O75897 302 aa13.44□□□□□ -0.26
PTPRU-208ENST00000493601 FASP25445 335 aa13.44□□□□□ -0.26
PTPRU-208ENST00000493601 HTR1FP30939 366 aa13.44□□□□□ -0.26
PTPRU-208ENST00000493601 FUT6P51993 359 aa13.44□□□□□ -0.26
PTPRU-208ENST00000493601 MEF2CQ06413 473 aaPredicted RBP13.44□□□□□ -0.26
PTPRU-208ENST00000493601 FAM189A2Q15884 450 aa13.44□□□□□ -0.26
PTPRU-208ENST00000493601 PLA1AQ53H76 456 aa13.44□□□□□ -0.26
PTPRU-208ENST00000493601 ZNF626Q68DY1 528 aa13.44□□□□□ -0.26
PTPRU-208ENST00000493601 Q8IYB0 196 aa13.44□□□□□ -0.26
PTPRU-208ENST00000493601 OR11H6Q8NGC7 330 aa13.44□□□□□ -0.26
PTPRU-208ENST00000493601 SLAMF9Q96A28 289 aa13.44□□□□□ -0.26
PTPRU-208ENST00000493601 ZNF714Q96N38 554 aa13.44□□□□□ -0.26
PTPRU-208ENST00000493601 ZNF702PQ9H963 129 aa13.44□□□□□ -0.26
PTPRU-208ENST00000493601 MTCH1Q9NZJ7 389 aa13.44□□□□□ -0.26
PTPRU-208ENST00000493601 FBXO24O75426 580 aa13.43□□□□□ -0.26
PTPRU-208ENST00000493601 SERPINA3P01011 423 aa13.43□□□□□ -0.26
PTPRU-208ENST00000493601 UBCP0CG48 685 aaKnown RBP13.43□□□□□ -0.26
PTPRU-208ENST00000493601 IGHV1-8P0DP01 117 aa13.43□□□□□ -0.26
PTPRU-208ENST00000493601 FCGR1AP12314 374 aa13.43□□□□□ -0.26
PTPRU-208ENST00000493601 CNN3Q15417 329 aaKnown RBP13.43□□□□□ -0.26
PTPRU-208ENST00000493601 UBE2V2Q15819 145 aa13.43□□□□□ -0.26
PTPRU-208ENST00000493601 SLC25A26Q70HW3 274 aa13.43□□□□□ -0.26
PTPRU-208ENST00000493601 FAM220AQ7Z4H9 259 aa13.43□□□□□ -0.26
PTPRU-208ENST00000493601 ENTHD1Q8IYW4 607 aa13.43□□□□□ -0.26
PTPRU-208ENST00000493601 DYNAPQ8N1N2 210 aa13.43□□□□□ -0.26
PTPRU-208ENST00000493601 Q8N2B8 174 aa13.43□□□□□ -0.26
PTPRU-208ENST00000493601 OR10H4Q8NGA5 316 aa13.43□□□□□ -0.26
PTPRU-208ENST00000493601 C10orf35Q96D05 121 aa13.43□□□□□ -0.26
PTPRU-208ENST00000493601 BORCS8Q96FH0 119 aa13.43□□□□□ -0.26
PTPRU-208ENST00000493601 SNX22Q96L94 193 aa13.43□□□□□ -0.26
PTPRU-208ENST00000493601 CIB1Q99828 191 aa13.43□□□□□ -0.26
PTPRU-208ENST00000493601 AP4S1Q9Y587 144 aa13.43□□□□□ -0.26
PTPRU-208ENST00000493601 PLXNB1O43157 2135 aa13.43□□□□□ -0.26
PTPRU-208ENST00000493601 IGKV1-27A0A075B6S5 117 aa13.42□□□□□ -0.26
PTPRU-208ENST00000493601 LOC107986453A0A1B0GWG9 222 aa13.42□□□□□ -0.26
PTPRU-208ENST00000493601 hADV38S2A0JD32 116 aa13.42□□□□□ -0.26
PTPRU-208ENST00000493601 MEGF11A6BM72 1044 aa13.42□□□□□ -0.26
PTPRU-208ENST00000493601 A6NDX4 124 aa13.42□□□□□ -0.26
PTPRU-208ENST00000493601 F8VVB4 439 aa13.42□□□□□ -0.26
PTPRU-208ENST00000493601 F8VWA3 439 aa13.42□□□□□ -0.26
PTPRU-208ENST00000493601 G3V4G9 280 aa13.42□□□□□ -0.26
PTPRU-208ENST00000493601 H3BSH0 61 aa13.42□□□□□ -0.26
PTPRU-208ENST00000493601 APOL3O95236 402 aa13.42□□□□□ -0.26
PTPRU-208ENST00000493601 ATP6V1E1P36543 226 aa13.42□□□□□ -0.26
PTPRU-208ENST00000493601 OR12D2P58182 307 aa13.42□□□□□ -0.26
PTPRU-208ENST00000493601 DYNC1I2Q13409 638 aaKnown RBP13.42□□□□□ -0.26
PTPRU-208ENST00000493601 TMED1Q13445 227 aa13.42□□□□□ -0.26
PTPRU-208ENST00000493601 EDDM3AQ14507 147 aa13.42□□□□□ -0.26
PTPRU-208ENST00000493601 SSX2Q16385 188 aa13.42□□□□□ -0.26
PTPRU-208ENST00000493601 BEAN1Q3B7T3 259 aa13.42□□□□□ -0.26
PTPRU-208ENST00000493601 TMEM219Q86XT9 240 aa13.42□□□□□ -0.26
PTPRU-208ENST00000493601 PP6455Q8WZ26 134 aa13.42□□□□□ -0.26
PTPRU-208ENST00000493601 EMG1Q92979 244 aaKnown RBP13.42□□□□□ -0.26
PTPRU-208ENST00000493601 RFKQ969G6 155 aa13.42□□□□□ -0.26
PTPRU-208ENST00000493601 GABARAPL3Q9BY60 117 aa13.42□□□□□ -0.26
PTPRU-208ENST00000493601 SERTAD4Q9NUC0 356 aa13.42□□□□□ -0.26
PTPRU-208ENST00000493601 LINC00312Q9Y6C7 94 aa13.42□□□□□ -0.26
PTPRU-208ENST00000493601 MEX3AA1L020 520 aaKnown RBP13.41□□□□□ -0.26
PTPRU-208ENST00000493601 F2RL2O00254 374 aa13.41□□□□□ -0.26
PTPRU-208ENST00000493601 HAND1O96004 215 aa13.41□□□□□ -0.26
PTPRU-208ENST00000493601 CYB5AP00167 134 aa13.41□□□□□ -0.26
PTPRU-208ENST00000493601 RBP2P50120 134 aa13.41□□□□□ -0.26
PTPRU-208ENST00000493601 RAB13P51153 203 aa13.41□□□□□ -0.26
PTPRU-208ENST00000493601 DYNLT3P51808 116 aa13.41□□□□□ -0.26
PTPRU-208ENST00000493601 HABP2Q14520 560 aaPredicted RBP13.41□□□□□ -0.26
PTPRU-208ENST00000493601 KPRPQ5T749 579 aaPredicted RBP13.41□□□□□ -0.26
PTPRU-208ENST00000493601 SAMD5Q5TGI4 173 aa13.41□□□□□ -0.26
PTPRU-208ENST00000493601 HIST2H2BDQ6DRA6 164 aa13.41□□□□□ -0.26
PTPRU-208ENST00000493601 TCF23Q7RTU1 214 aa13.41□□□□□ -0.26
PTPRU-208ENST00000493601 EGFL6Q8IUX8 553 aa13.41□□□□□ -0.26
PTPRU-208ENST00000493601 PRSS35Q8N3Z0 413 aa13.41□□□□□ -0.26
PTPRU-208ENST00000493601 DNAAF1Q8NEP3 725 aa13.41□□□□□ -0.26
PTPRU-208ENST00000493601 OR4S1Q8NGB4 309 aa13.41□□□□□ -0.26
PTPRU-208ENST00000493601 OR8J1Q8NGP2 316 aa13.41□□□□□ -0.26
PTPRU-208ENST00000493601 PRSS22Q9GZN4 317 aa13.41□□□□□ -0.26
PTPRU-208ENST00000493601 RIBC2Q9H4K1 309 aa13.41□□□□□ -0.26
PTPRU-208ENST00000493601 SEBOXQ9HB31 216 aaPredicted RBP13.41□□□□□ -0.26
PTPRU-208ENST00000493601 GNG8Q9UK08 70 aa13.41□□□□□ -0.26
PTPRU-208ENST00000493601 SESN1Q9Y6P5 492 aa13.41□□□□□ -0.26
PTPRU-208ENST00000493601 TRBV2A0A0J9YWF9 115 aa13.4□□□□□ -0.26
PTPRU-208ENST00000493601 TMEM82A0PJX8 343 aa13.4□□□□□ -0.26
PTPRU-208ENST00000493601 PEX14O75381 377 aa13.4□□□□□ -0.26
PTPRU-208ENST00000493601 INMTO95050 263 aa13.4□□□□□ -0.26
PTPRU-208ENST00000493601 ALDOBP05062 364 aa13.4□□□□□ -0.26
PTPRU-208ENST00000493601 GABRR1P24046 479 aa13.4□□□□□ -0.26
PTPRU-208ENST00000493601 PEX2P28328 305 aa13.4□□□□□ -0.26
PTPRU-208ENST00000493601 RASSF2P50749 326 aa13.4□□□□□ -0.26
PTPRU-208ENST00000493601 ACTA2P62736 377 aa13.4□□□□□ -0.26
PTPRU-208ENST00000493601 ACTG2P63267 376 aa13.4□□□□□ -0.26
PTPRU-208ENST00000493601 ACTC1P68032 377 aa13.4□□□□□ -0.26
PTPRU-208ENST00000493601 ACTA1P68133 377 aa13.4□□□□□ -0.26
PTPRU-208ENST00000493601 BNIP1Q12981 228 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms