RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 CFL2Q9Y281 166 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 TRIP11Q15643 1979 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 MYO7AQ13402 2215 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 PEX7O00628 323 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 PRMT5O14744 637 aaPredicted RBP2.24□□□□□ -2.05
SNX13-209ENST00000492626 EMC8O43402 210 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 SRP72O76094 671 aaKnown RBP2.24□□□□□ -2.05
SNX13-209ENST00000492626 PLEKHA8P1O95397 391 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 BGLAPP02818 100 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 TUBG1P23258 451 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 HTR2CP28335 458 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 CEACAM3P40198 252 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 HCAR3P49019 387 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 SLC25A11Q02978 314 aaKnown RBP2.24□□□□□ -2.05
SNX13-209ENST00000492626 ZNHIT3Q15649 155 aaPredicted RBP2.24□□□□□ -2.05
SNX13-209ENST00000492626 UTF1Q5T230 341 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 SPOPLQ6IQ16 392 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 TEX43Q6ZNM6 134 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 Q6ZSR3 168 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 PRSS41Q7RTY9 318 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 PID1Q7Z2X4 250 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 SLC30A8Q8IWU4 369 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 OR6K2Q8NGY2 324 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 SCGB3A2Q96PL1 93 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 ANGPTL4Q9BY76 406 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 GOLPH3Q9H4A6 298 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 TUBG2Q9NRH3 451 aa2.24□□□□□ -2.05
SNX13-209ENST00000492626 PAIP2BQ9ULR5 123 aaKnown RBP2.24□□□□□ -2.05
SNX13-209ENST00000492626 SLC22A20A6NK97 555 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 H3BN98 237 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 J3QLI3 93 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 RFXANKO14593 260 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 TNFSF13O75888 250 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 CGAP01215 116 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 CRHP06850 196 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 CTRB1P17538 263 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 HRH1P35367 487 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 HERVK_113P61574 105 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 SLC35B1P78383 322 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 ST3GAL4Q11206 333 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 GNA13Q14344 377 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 TTLL9Q3SXZ7 439 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 CTRB2Q6GPI1 263 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 LINC00336Q6ZUF6 198 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 TRMT10CQ7L0Y3 403 aaKnown RBP2.23□□□□□ -2.05
SNX13-209ENST00000492626 C6orf120Q7Z4R8 191 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 RNF175Q8N4F7 328 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 DEFB119Q8N690 84 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 FDCSPQ8NFU4 85 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 OR51F2Q8NH61 342 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 FOXN4Q96NZ1 517 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 HINT2Q9BX68 163 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 CD84Q9UIB8 345 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 MOKQ9UQ07 419 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 HES2Q9Y543 173 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 CSAG2Q9Y5P2 127 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 CENPFP49454 3210 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 A0A1B0GU03 582 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 PSMB11A5LHX3 300 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 MYL12BO14950 172 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 PFDN1O60925 122 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 EIF4EP06730 217 aaKnown RBP2.23□□□□□ -2.05
SNX13-209ENST00000492626 RAB4AP20338 218 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 S100A5P33763 92 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 OPRM1P35372 400 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 MAS1LP35410 378 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 PLTPP55058 493 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 NCALDP61601 193 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 POLR2GP62487 172 aaKnown RBP eCLIP2.23□□□□□ -2.05
SNX13-209ENST00000492626 SGCAQ16586 387 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 C5orf64Q2M2E5 130 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 DUPD1Q68J44 220 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 GSG1LQ6UXU4 331 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 NDUFAF7Q7L592 441 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 TMEM86BQ8N661 226 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 DCAF4L2Q8NA75 395 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 ACTRT1Q8TDG2 376 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 DOK4Q8TEW6 326 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 TRNT1Q96Q11 434 aaKnown RBP2.23□□□□□ -2.05
SNX13-209ENST00000492626 CCL19Q99731 98 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 TREX1Q9NSU2 369 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 FAIMQ9NVQ4 179 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 ZNF225Q9UK10 706 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 HYOU1Q9Y4L1 999 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 USH1CQ9Y6N9 552 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 CFAP46Q8IYW2 2715 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 IGKV3D-20A0A0C4DH25 116 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 HLA-DPB1P04440 258 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 RAB3AP20336 220 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 PPP1CBP62140 327 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 MXD1Q05195 221 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 C2orf54Q08AI8 447 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 EGFEM1PQ0D2K5 195 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 GGTLC2Q14390 218 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 ATP6V1C2Q8NEY4 427 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 OR4S2Q8NH73 311 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 C7orf33Q8WU49 177 aa2.23□□□□□ -2.05
SNX13-209ENST00000492626 AURKBQ96GD4 344 aaPredicted RBP2.23□□□□□ -2.05
SNX13-209ENST00000492626 UTP23Q9BRU9 249 aaKnown RBP2.23□□□□□ -2.05
SNX13-209ENST00000492626 ULBP2Q9BZM5 246 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms