RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 RFPL4BQ6ZWI9 263 aa9.26□□□□□ -0.93
USP4-214ENST00000491791 TMUB2Q71RG4 321 aa9.26□□□□□ -0.93
USP4-214ENST00000491791 OSR2Q8N2R0 312 aa9.26□□□□□ -0.93
USP4-214ENST00000491791 OR5A2Q8NGI9 324 aa9.26□□□□□ -0.93
USP4-214ENST00000491791 OR5D18Q8NGL1 313 aa9.26□□□□□ -0.93
USP4-214ENST00000491791 OR6K3Q8NGY3 331 aa9.26□□□□□ -0.93
USP4-214ENST00000491791 OR13G1Q8NGZ3 307 aa9.26□□□□□ -0.93
USP4-214ENST00000491791 NPRL2Q8WTW4 380 aa9.26□□□□□ -0.93
USP4-214ENST00000491791 NANOS1Q8WY41 292 aaKnown RBP9.26□□□□□ -0.93
USP4-214ENST00000491791 GTF3AQ92664 365 aaKnown RBP9.26□□□□□ -0.93
USP4-214ENST00000491791 EXTL1Q92935 676 aa9.26□□□□□ -0.93
USP4-214ENST00000491791 TMEM230Q96A57 120 aa9.26□□□□□ -0.93
USP4-214ENST00000491791 ELMOD3Q96FG2 381 aa9.26□□□□□ -0.93
USP4-214ENST00000491791 WDR89Q96FK6 387 aaPredicted RBP9.26□□□□□ -0.93
USP4-214ENST00000491791 RTBDNQ9BSG5 229 aaPredicted RBP9.26□□□□□ -0.93
USP4-214ENST00000491791 GSX2Q9BZM3 304 aa9.26□□□□□ -0.93
USP4-214ENST00000491791 NMES1Q9C002 83 aa9.26□□□□□ -0.93
USP4-214ENST00000491791 PPA2Q9H2U2 334 aa9.26□□□□□ -0.93
USP4-214ENST00000491791 RAB18Q9NP72 206 aa9.26□□□□□ -0.93
USP4-214ENST00000491791 PLEKHJ1Q9NW61 149 aa9.26□□□□□ -0.93
USP4-214ENST00000491791 UBQLN2Q9UHD9 624 aa9.26□□□□□ -0.93
USP4-214ENST00000491791 BOD1L1Q8NFC6 3051 aa9.26□□□□□ -0.93
USP4-214ENST00000491791 MED13Q9UHV7 2174 aa9.25□□□□□ -0.93
USP4-214ENST00000491791 TRAV17A0A0B4J275 112 aa9.25□□□□□ -0.93
USP4-214ENST00000491791 ZNF503-AS2A6NEH8 195 aa9.25□□□□□ -0.93
USP4-214ENST00000491791 NKX2-8O15522 239 aa9.25□□□□□ -0.93
USP4-214ENST00000491791 PDCD6O75340 191 aa9.25□□□□□ -0.93
USP4-214ENST00000491791 TOXO94900 526 aa9.25□□□□□ -0.93
USP4-214ENST00000491791 OR2F2O95006 317 aa9.25□□□□□ -0.93
USP4-214ENST00000491791 SIX6O95475 246 aa9.25□□□□□ -0.93
USP4-214ENST00000491791 HLA-HP01893 362 aa9.25□□□□□ -0.93
USP4-214ENST00000491791 GLAP06280 429 aa9.25□□□□□ -0.93
USP4-214ENST00000491791 LYL1P12980 280 aa9.25□□□□□ -0.93
USP4-214ENST00000491791 RPS2P15880 293 aaKnown RBP9.25□□□□□ -0.93
USP4-214ENST00000491791 OR3A3P47888 321 aa9.25□□□□□ -0.93
USP4-214ENST00000491791 FOXG1P55316 489 aaPredicted RBP9.25□□□□□ -0.93
USP4-214ENST00000491791 UCP3P55916 312 aa9.25□□□□□ -0.93
USP4-214ENST00000491791 PLP2Q04941 152 aa9.25□□□□□ -0.93
USP4-214ENST00000491791 OR2F1Q13607 317 aa9.25□□□□□ -0.93
USP4-214ENST00000491791 EXOSC2Q13868 293 aaKnown RBP9.25□□□□□ -0.93
USP4-214ENST00000491791 HLXQ14774 488 aaPredicted RBP9.25□□□□□ -0.93
USP4-214ENST00000491791 ATP1A1-AS1Q5TC04 95 aa9.25□□□□□ -0.93
USP4-214ENST00000491791 MOB3CQ70IA8 216 aa9.25□□□□□ -0.93
USP4-214ENST00000491791 C6orf201Q7Z4U5 140 aa9.25□□□□□ -0.93
USP4-214ENST00000491791 OR5L1Q8NGL2 311 aa9.25□□□□□ -0.93
USP4-214ENST00000491791 OR10K1Q8NGX5 313 aa9.25□□□□□ -0.93
USP4-214ENST00000491791 MARCH1Q8TCQ1 289 aa9.25□□□□□ -0.93
USP4-214ENST00000491791 DPCDQ9BVM2 203 aaPredicted RBP9.25□□□□□ -0.93
USP4-214ENST00000491791 RCC2Q9P258 522 aaKnown RBP9.25□□□□□ -0.93
USP4-214ENST00000491791 KIF25Q9UIL4 384 aa9.25□□□□□ -0.93
USP4-214ENST00000491791 ANXA10Q9UJ72 324 aa9.25□□□□□ -0.93
USP4-214ENST00000491791 NOP16Q9Y3C1 178 aaKnown RBP9.25□□□□□ -0.93
USP4-214ENST00000491791 MPC1Q9Y5U8 109 aa9.25□□□□□ -0.93
USP4-214ENST00000491791 FAM230AA0A1W2PPH8 454 aa9.24□□□□□ -0.93
USP4-214ENST00000491791 OR5B21A6NL26 309 aa9.24□□□□□ -0.93
USP4-214ENST00000491791 A6NL46 340 aa9.24□□□□□ -0.93
USP4-214ENST00000491791 MSTNO14793 375 aa9.24□□□□□ -0.93
USP4-214ENST00000491791 IGHV3-9P01782 118 aa9.24□□□□□ -0.93
USP4-214ENST00000491791 CTSDP07339 412 aaPredicted RBP9.24□□□□□ -0.93
USP4-214ENST00000491791 FUT3P21217 361 aa9.24□□□□□ -0.93
USP4-214ENST00000491791 TUBG1P23258 451 aa9.24□□□□□ -0.93
USP4-214ENST00000491791 RBM11P57052 281 aaKnown RBP9.24□□□□□ -0.93
USP4-214ENST00000491791 SUPT4H1P63272 117 aaKnown RBP9.24□□□□□ -0.93
USP4-214ENST00000491791 IL15RAQ13261 267 aa9.24□□□□□ -0.93
USP4-214ENST00000491791 DAZAP2Q15038 168 aaPredicted RBP9.24□□□□□ -0.93
USP4-214ENST00000491791 CHRFAM7AQ494W8 412 aa9.24□□□□□ -0.93
USP4-214ENST00000491791 ESCO2Q56NI9 601 aa9.24□□□□□ -0.93
USP4-214ENST00000491791 PLCXD3Q63HM9 321 aa9.24□□□□□ -0.93
USP4-214ENST00000491791 C11orf88Q6PI97 169 aa9.24□□□□□ -0.93
USP4-214ENST00000491791 FBXW12Q6X9E4 464 aa9.24□□□□□ -0.93
USP4-214ENST00000491791 C3P1Q6ZMU1 363 aa9.24□□□□□ -0.93
USP4-214ENST00000491791 C17orf107Q6ZR85 190 aa9.24□□□□□ -0.93
USP4-214ENST00000491791 LINC00596Q86U02 117 aa9.24□□□□□ -0.93
USP4-214ENST00000491791 SLC51BQ86UW2 128 aa9.24□□□□□ -0.93
USP4-214ENST00000491791 ZDHHC23Q8IYP9 409 aa9.24□□□□□ -0.93
USP4-214ENST00000491791 KCNRGQ8N5I3 272 aa9.24□□□□□ -0.93
USP4-214ENST00000491791 ADAD2Q8NCV1 583 aaKnown RBP9.24□□□□□ -0.93
USP4-214ENST00000491791 OR10AD1Q8NGE0 317 aa9.24□□□□□ -0.93
USP4-214ENST00000491791 OR56B2PQ8NGI1 322 aa9.24□□□□□ -0.93
USP4-214ENST00000491791 PIGCQ92535 297 aa9.24□□□□□ -0.93
USP4-214ENST00000491791 SLX1AQ9BQ83 275 aa9.24□□□□□ -0.93
USP4-214ENST00000491791 ST6GALNAC5Q9BVH7 336 aa9.24□□□□□ -0.93
USP4-214ENST00000491791 PKIBQ9C010 78 aa9.24□□□□□ -0.93
USP4-214ENST00000491791 DEFB127Q9H1M4 99 aa9.24□□□□□ -0.93
USP4-214ENST00000491791 LDAHQ9H6V9 325 aa9.24□□□□□ -0.93
USP4-214ENST00000491791 IFT22Q9H7X7 185 aa9.24□□□□□ -0.93
USP4-214ENST00000491791 TUBG2Q9NRH3 451 aa9.24□□□□□ -0.93
USP4-214ENST00000491791 PRSS50Q9UI38 385 aa9.24□□□□□ -0.93
USP4-214ENST00000491791 TNFSF18Q9UNG2 199 aa9.24□□□□□ -0.93
USP4-214ENST00000491791 PTPN13Q12923 2485 aa9.24□□□□□ -0.93
USP4-214ENST00000491791 A0A096LPE4 126 aa9.23□□□□□ -0.93
USP4-214ENST00000491791 TRBV6-6A0A0A6YYG2 114 aa9.23□□□□□ -0.93
USP4-214ENST00000491791 A0A1W2PPZ6 126 aa9.23□□□□□ -0.93
USP4-214ENST00000491791 C5orf49A4QMS7 147 aa9.23□□□□□ -0.93
USP4-214ENST00000491791 CD300LBA8K4G0 201 aa9.23□□□□□ -0.93
USP4-214ENST00000491791 ZNF891A8MT65 544 aaPredicted RBP9.23□□□□□ -0.93
USP4-214ENST00000491791 LEUTXA8MZ59 168 aa9.23□□□□□ -0.93
USP4-214ENST00000491791 SPRY1O43609 319 aaPredicted RBP9.23□□□□□ -0.93
USP4-214ENST00000491791 ANGPTL7O43827 346 aa9.23□□□□□ -0.93
USP4-214ENST00000491791 NOS1APO75052 506 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms