RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 OR6Q1Q8NGQ2 317 aa18.3■□□□□ 0.52
VCPKMT-204ENST00000491402 CCL17Q92583 94 aa18.3■□□□□ 0.52
VCPKMT-204ENST00000491402 HPS1Q92902 700 aa18.3■□□□□ 0.52
VCPKMT-204ENST00000491402 EMG1Q92979 244 aaKnown RBP18.3■□□□□ 0.52
VCPKMT-204ENST00000491402 MRPS24Q96EL2 167 aaKnown RBP18.3■□□□□ 0.52
VCPKMT-204ENST00000491402 CMTM3Q96MX0 182 aa18.3■□□□□ 0.52
VCPKMT-204ENST00000491402 WDR13Q9H1Z4 485 aa18.3■□□□□ 0.52
VCPKMT-204ENST00000491402 HES4Q9HCC6 221 aa18.3■□□□□ 0.52
VCPKMT-204ENST00000491402 DCAF16Q9NXF7 216 aa18.3■□□□□ 0.52
VCPKMT-204ENST00000491402 RNF7Q9UBF6 113 aa18.3■□□□□ 0.52
VCPKMT-204ENST00000491402 MAP1AP78559 2803 aaPredicted RBP18.3■□□□□ 0.52
VCPKMT-204ENST00000491402 WNT9BO14905 357 aa18.3■□□□□ 0.52
VCPKMT-204ENST00000491402 CYB5R3P00387 301 aaPredicted RBP18.3■□□□□ 0.52
VCPKMT-204ENST00000491402 LHBP01229 141 aa18.3■□□□□ 0.52
VCPKMT-204ENST00000491402 APOA1P02647 267 aa18.3■□□□□ 0.52
VCPKMT-204ENST00000491402 IRF2P14316 349 aa18.3■□□□□ 0.52
VCPKMT-204ENST00000491402 ELK1P19419 428 aa18.3■□□□□ 0.52
VCPKMT-204ENST00000491402 GLRA1P23415 457 aa18.3■□□□□ 0.52
VCPKMT-204ENST00000491402 RPS27AP62979 156 aaKnown RBP18.3■□□□□ 0.52
VCPKMT-204ENST00000491402 BIVMQ86UB2 503 aa18.3■□□□□ 0.52
VCPKMT-204ENST00000491402 CMTM4Q8IZR5 234 aa18.3■□□□□ 0.52
VCPKMT-204ENST00000491402 FAM58AQ8N1B3 248 aa18.3■□□□□ 0.52
VCPKMT-204ENST00000491402 GAL3ST1Q99999 423 aa18.3■□□□□ 0.52
VCPKMT-204ENST00000491402 SELENOIQ9C0D9 397 aa18.3■□□□□ 0.52
VCPKMT-204ENST00000491402 LPAR5Q9H1C0 372 aa18.3■□□□□ 0.52
VCPKMT-204ENST00000491402 ABCG5Q9H222 651 aa18.3■□□□□ 0.52
VCPKMT-204ENST00000491402 CXorf56Q9H5V9 222 aa18.3■□□□□ 0.52
VCPKMT-204ENST00000491402 HMG20AQ9NP66 347 aa18.3■□□□□ 0.52
VCPKMT-204ENST00000491402 TMEM106BQ9NUM4 274 aa18.3■□□□□ 0.52
VCPKMT-204ENST00000491402 IL36RNQ9UBH0 155 aa18.3■□□□□ 0.52
VCPKMT-204ENST00000491402 NPTNQ9Y639 398 aa18.3■□□□□ 0.52
VCPKMT-204ENST00000491402 LRRC30A6NM36 301 aa18.29■□□□□ 0.52
VCPKMT-204ENST00000491402 LY6HO94772 140 aa18.29■□□□□ 0.52
VCPKMT-204ENST00000491402 PRKACAP17612 351 aa18.29■□□□□ 0.52
VCPKMT-204ENST00000491402 EGR1P18146 543 aa18.29■□□□□ 0.52
VCPKMT-204ENST00000491402 PIGYQ3MUY2 71 aa18.29■□□□□ 0.52
VCPKMT-204ENST00000491402 Q96M66 194 aa18.29■□□□□ 0.52
VCPKMT-204ENST00000491402 WDFY2Q96P53 400 aa18.29■□□□□ 0.52
VCPKMT-204ENST00000491402 EDARQ9UNE0 448 aa18.29■□□□□ 0.52
VCPKMT-204ENST00000491402 ST3GAL6Q9Y274 331 aa18.29■□□□□ 0.52
VCPKMT-204ENST00000491402 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.28■□□□□ 0.52
VCPKMT-204ENST00000491402 NDUFS7O75251 213 aa18.28■□□□□ 0.52
VCPKMT-204ENST00000491402 RBM11P57052 281 aaKnown RBP18.28■□□□□ 0.52
VCPKMT-204ENST00000491402 HFEQ30201 348 aa18.28■□□□□ 0.52
VCPKMT-204ENST00000491402 ACP7Q6ZNF0 438 aa18.28■□□□□ 0.52
VCPKMT-204ENST00000491402 OR51T1Q8NGJ9 327 aa18.28■□□□□ 0.52
VCPKMT-204ENST00000491402 RAB40AQ8WXH6 277 aa18.28■□□□□ 0.52
VCPKMT-204ENST00000491402 NICN1Q9BSH3 213 aa18.28■□□□□ 0.52
VCPKMT-204ENST00000491402 URM1Q9BTM9 101 aaKnown RBP18.28■□□□□ 0.52
VCPKMT-204ENST00000491402 ATG5Q9H1Y0 275 aa18.28■□□□□ 0.52
VCPKMT-204ENST00000491402 ADAM30Q9UKF2 790 aa18.28■□□□□ 0.52
VCPKMT-204ENST00000491402 FAM25AB3EWG3 89 aa18.27■□□□□ 0.52
VCPKMT-204ENST00000491402 FAM25CB3EWG5 89 aa18.27■□□□□ 0.52
VCPKMT-204ENST00000491402 FAM25GB3EWG6 89 aa18.27■□□□□ 0.52
VCPKMT-204ENST00000491402 DNASE1P24855 282 aa18.27■□□□□ 0.52
VCPKMT-204ENST00000491402 TNFSF8P32971 234 aa18.27■□□□□ 0.52
VCPKMT-204ENST00000491402 SNU13P55769 128 aaKnown RBP18.27■□□□□ 0.52
VCPKMT-204ENST00000491402 SMIM21Q3B7S5 101 aa18.27■□□□□ 0.52
VCPKMT-204ENST00000491402 NHLRC3Q5JS37 347 aa18.27■□□□□ 0.52
VCPKMT-204ENST00000491402 FAM201AQ5SY85 155 aa18.27■□□□□ 0.52
VCPKMT-204ENST00000491402 METAP1DQ6UB28 335 aaPredicted RBP18.27■□□□□ 0.52
VCPKMT-204ENST00000491402 BOLLQ8N9W6 283 aaKnown RBP18.27■□□□□ 0.52
VCPKMT-204ENST00000491402 YIPF5Q969M3 257 aa18.27■□□□□ 0.52
VCPKMT-204ENST00000491402 SEH1LQ96EE3 360 aa18.27■□□□□ 0.52
VCPKMT-204ENST00000491402 TM2D1Q9BX74 207 aa18.27■□□□□ 0.52
VCPKMT-204ENST00000491402 ARID1AO14497 2285 aa18.27■□□□□ 0.52
VCPKMT-204ENST00000491402 CCDC168Q8NDH2 2452 aa18.27■□□□□ 0.52
VCPKMT-204ENST00000491402 METTL21EPA6NDL7 271 aa18.27■□□□□ 0.51
VCPKMT-204ENST00000491402 IFNL4K9M1U5 179 aa18.27■□□□□ 0.51
VCPKMT-204ENST00000491402 CPT2P23786 658 aa18.27■□□□□ 0.51
VCPKMT-204ENST00000491402 COL8A2P25067 703 aa18.27■□□□□ 0.51
VCPKMT-204ENST00000491402 MRPS11P82912 194 aaKnown RBP18.27■□□□□ 0.51
VCPKMT-204ENST00000491402 LINC00299Q6ZSB3 139 aa18.27■□□□□ 0.51
VCPKMT-204ENST00000491402 C1orf87Q8N0U7 546 aa18.27■□□□□ 0.51
VCPKMT-204ENST00000491402 RDH5Q92781 318 aa18.27■□□□□ 0.51
VCPKMT-204ENST00000491402 DIRAS2Q96HU8 199 aa18.27■□□□□ 0.51
VCPKMT-204ENST00000491402 RASL12Q9NYN1 266 aa18.27■□□□□ 0.51
VCPKMT-204ENST00000491402 A0A0A6YYD4 124 aa18.26■□□□□ 0.51
VCPKMT-204ENST00000491402 LYNX1G3V0Z9 82 aa18.26■□□□□ 0.51
VCPKMT-204ENST00000491402 TMEM178BH3BS89 294 aa18.26■□□□□ 0.51
VCPKMT-204ENST00000491402 GEMIN2O14893 280 aaKnown RBP18.26■□□□□ 0.51
VCPKMT-204ENST00000491402 F12P00748 615 aaPredicted RBP18.26■□□□□ 0.51
VCPKMT-204ENST00000491402 LYNX1P0DP58 116 aa18.26■□□□□ 0.51
VCPKMT-204ENST00000491402 DAOP14920 347 aa18.26■□□□□ 0.51
VCPKMT-204ENST00000491402 EFNA4P52798 201 aa18.26■□□□□ 0.51
VCPKMT-204ENST00000491402 FAM189A2Q15884 450 aa18.26■□□□□ 0.51
VCPKMT-204ENST00000491402 TAF9Q16594 264 aa18.26■□□□□ 0.51
VCPKMT-204ENST00000491402 CNIH2Q6PI25 160 aa18.26■□□□□ 0.51
VCPKMT-204ENST00000491402 S100A16Q96FQ6 103 aaKnown RBP18.26■□□□□ 0.51
VCPKMT-204ENST00000491402 DLL4Q9NR61 685 aa18.26■□□□□ 0.51
VCPKMT-204ENST00000491402 RP2O75695 350 aa18.25■□□□□ 0.51
VCPKMT-204ENST00000491402 GABRR1P24046 479 aa18.25■□□□□ 0.51
VCPKMT-204ENST00000491402 VEGFCP49767 419 aa18.25■□□□□ 0.51
VCPKMT-204ENST00000491402 SFRP4Q6FHJ7 346 aaPredicted RBP18.25■□□□□ 0.51
VCPKMT-204ENST00000491402 FAM89BQ8N5H3 189 aa18.25■□□□□ 0.51
VCPKMT-204ENST00000491402 C19orf18Q8NEA5 215 aa18.25■□□□□ 0.51
VCPKMT-204ENST00000491402 EXTL2Q9UBQ6 330 aa18.25■□□□□ 0.51
VCPKMT-204ENST00000491402 CYSRT1A8MQ03 144 aa18.25■□□□□ 0.51
VCPKMT-204ENST00000491402 RAB27BO00194 218 aa18.25■□□□□ 0.51
VCPKMT-204ENST00000491402 ZNF205O95201 554 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms