RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 RTN4RL2Q86UN3 420 aa19.69■□□□□ 0.74
USF3-203ENST00000491165 HOGA1Q86XE5 327 aa19.69■□□□□ 0.74
USF3-203ENST00000491165 GPR137CQ8N3F9 429 aa19.69■□□□□ 0.74
USF3-203ENST00000491165 FBXW5Q969U6 566 aa19.69■□□□□ 0.74
USF3-203ENST00000491165 SPACA5Q96QH8 159 aa19.69■□□□□ 0.74
USF3-203ENST00000491165 ARPC5LQ9BPX5 153 aa19.69■□□□□ 0.74
USF3-203ENST00000491165 RBM24Q9BX46 236 aaKnown RBP19.69■□□□□ 0.74
USF3-203ENST00000491165 GPR35Q9HC97 309 aa19.69■□□□□ 0.74
USF3-203ENST00000491165 C5orf51A6NDU8 294 aa19.69■□□□□ 0.74
USF3-203ENST00000491165 NUPL2O15504 423 aaKnown RBP19.69■□□□□ 0.74
USF3-203ENST00000491165 GSTP1P09211 210 aaKnown RBP19.69■□□□□ 0.74
USF3-203ENST00000491165 CEACAM16Q2WEN9 425 aa19.69■□□□□ 0.74
USF3-203ENST00000491165 ATRAIDQ6UW56 229 aa19.69■□□□□ 0.74
USF3-203ENST00000491165 ABHD12BQ7Z5M8 362 aaPredicted RBP19.69■□□□□ 0.74
USF3-203ENST00000491165 CCDC36Q8IYA8 594 aa19.69■□□□□ 0.74
USF3-203ENST00000491165 MARCH1Q8TCQ1 289 aa19.69■□□□□ 0.74
USF3-203ENST00000491165 LINC00470Q9BZP3 86 aa19.69■□□□□ 0.74
USF3-203ENST00000491165 OPN3Q9H1Y3 402 aaPredicted RBP19.69■□□□□ 0.74
USF3-203ENST00000491165 DBX1A6NMT0 343 aa19.68■□□□□ 0.74
USF3-203ENST00000491165 DHHO43323 396 aa19.68■□□□□ 0.74
USF3-203ENST00000491165 PGAP1Q75T13 922 aa19.68■□□□□ 0.74
USF3-203ENST00000491165 OR5AS1Q8N127 324 aa19.68■□□□□ 0.74
USF3-203ENST00000491165 PLSCR4Q9NRQ2 329 aa19.68■□□□□ 0.74
USF3-203ENST00000491165 FLNCQ14315 2725 aa19.68■□□□□ 0.74
USF3-203ENST00000491165 A0A0A6YYD4 124 aa19.67■□□□□ 0.74
USF3-203ENST00000491165 TOR1AO14656 332 aa19.67■□□□□ 0.74
USF3-203ENST00000491165 MPIG6BO95866 241 aa19.67■□□□□ 0.74
USF3-203ENST00000491165 CRHP06850 196 aa19.67■□□□□ 0.74
USF3-203ENST00000491165 BMP5P22003 454 aa19.67■□□□□ 0.74
USF3-203ENST00000491165 PSMB6P28072 239 aa19.67■□□□□ 0.74
USF3-203ENST00000491165 RIPPLY2Q5TAB7 128 aa19.67■□□□□ 0.74
USF3-203ENST00000491165 FBXW9Q5XUX1 488 aa19.67■□□□□ 0.74
USF3-203ENST00000491165 RNF144BQ7Z419 303 aa19.67■□□□□ 0.74
USF3-203ENST00000491165 OR8B12Q8NGG6 310 aa19.67■□□□□ 0.74
USF3-203ENST00000491165 KCNG3Q8TAE7 436 aa19.67■□□□□ 0.74
USF3-203ENST00000491165 RAB3CQ96E17 227 aa19.67■□□□□ 0.74
USF3-203ENST00000491165 CHMP1AQ9HD42 196 aaPredicted RBP19.67■□□□□ 0.74
USF3-203ENST00000491165 ANAPC10Q9UM13 185 aa19.67■□□□□ 0.74
USF3-203ENST00000491165 CCL21O00585 134 aa19.67■□□□□ 0.74
USF3-203ENST00000491165 ZNF121P58317 390 aaPredicted RBP19.67■□□□□ 0.74
USF3-203ENST00000491165 MICBQ29980 383 aa19.67■□□□□ 0.74
USF3-203ENST00000491165 ACTBL2Q562R1 376 aa19.67■□□□□ 0.74
USF3-203ENST00000491165 ZNF610Q8N9Z0 462 aa19.67■□□□□ 0.74
USF3-203ENST00000491165 TMEM104Q8NE00 496 aa19.67■□□□□ 0.74
USF3-203ENST00000491165 TMEM185AQ8NFB2 350 aa19.67■□□□□ 0.74
USF3-203ENST00000491165 BPIFCQ8NFQ6 507 aa19.67■□□□□ 0.74
USF3-203ENST00000491165 TERB2Q8NHR7 220 aa19.67■□□□□ 0.74
USF3-203ENST00000491165 NABP1Q96AH0 204 aa19.67■□□□□ 0.74
USF3-203ENST00000491165 LRRC46Q96FV0 321 aa19.67■□□□□ 0.74
USF3-203ENST00000491165 AIFM2Q9BRQ8 373 aa19.67■□□□□ 0.74
USF3-203ENST00000491165 PIGMQ9H3S5 423 aa19.67■□□□□ 0.74
USF3-203ENST00000491165 GPR84Q9NQS5 396 aa19.67■□□□□ 0.74
USF3-203ENST00000491165 C13orf42A0A1B0GVH6 325 aa19.66■□□□□ 0.74
USF3-203ENST00000491165 ATP6V1G2-DDX39BF2Z307 99 aa19.66■□□□□ 0.74
USF3-203ENST00000491165 CDC14BO60729 498 aa19.66■□□□□ 0.74
USF3-203ENST00000491165 SLC2A1P11166 492 aa19.66■□□□□ 0.74
USF3-203ENST00000491165 HIST1H1DP16402 221 aaKnown RBP19.66■□□□□ 0.74
USF3-203ENST00000491165 NAT1P18440 290 aa19.66■□□□□ 0.74
USF3-203ENST00000491165 CTSSP25774 331 aa19.66■□□□□ 0.74
USF3-203ENST00000491165 SERPINF1P36955 418 aa19.66■□□□□ 0.74
USF3-203ENST00000491165 VAX1Q5SQQ9 334 aa19.66■□□□□ 0.74
USF3-203ENST00000491165 NAA40Q86UY6 237 aa19.66■□□□□ 0.74
USF3-203ENST00000491165 PRR7Q8TB68 274 aa19.66■□□□□ 0.74
USF3-203ENST00000491165 C1orf147Q96MC9 270 aaPredicted RBP19.66■□□□□ 0.74
USF3-203ENST00000491165 NMES1Q9C002 83 aa19.66■□□□□ 0.74
USF3-203ENST00000491165 ASH2LQ9UBL3 628 aa19.66■□□□□ 0.74
USF3-203ENST00000491165 IL18BPO95998 194 aa19.66■□□□□ 0.74
USF3-203ENST00000491165 HCKP08631 526 aa19.66■□□□□ 0.74
USF3-203ENST00000491165 OR3A4PP47883 348 aa19.66■□□□□ 0.74
USF3-203ENST00000491165 CX3CR1P49238 355 aa19.66■□□□□ 0.74
USF3-203ENST00000491165 CASP6P55212 293 aa19.66■□□□□ 0.74
USF3-203ENST00000491165 DEFA5Q01523 94 aa19.66■□□□□ 0.74
USF3-203ENST00000491165 TMEM128Q5BJH2 165 aa19.66■□□□□ 0.74
USF3-203ENST00000491165 PLAC9Q5JTB6 97 aa19.66■□□□□ 0.74
USF3-203ENST00000491165 ARRDC1Q8N5I2 433 aa19.66■□□□□ 0.74
USF3-203ENST00000491165 SOX7Q9BT81 388 aa19.66■□□□□ 0.74
USF3-203ENST00000491165 TMEM59Q9BXS4 323 aa19.66■□□□□ 0.74
USF3-203ENST00000491165 RPL36A-HNRNPH2H7BZ11 118 aa19.65■□□□□ 0.74
USF3-203ENST00000491165 SOCS1O15524 211 aa19.65■□□□□ 0.74
USF3-203ENST00000491165 B4GALT1P15291 398 aa19.65■□□□□ 0.74
USF3-203ENST00000491165 CYCSP99999 105 aaKnown RBP19.65■□□□□ 0.74
USF3-203ENST00000491165 FAM189A2Q15884 450 aa19.65■□□□□ 0.74
USF3-203ENST00000491165 FAM71F1Q96KD3 344 aaPredicted RBP19.65■□□□□ 0.74
USF3-203ENST00000491165 SFXN3Q9BWM7 321 aa19.65■□□□□ 0.74
USF3-203ENST00000491165 PRR14LQ5THK1 2151 aa19.65■□□□□ 0.74
USF3-203ENST00000491165 ZNF474Q6S9Z5 364 aaPredicted RBP19.64■□□□□ 0.74
USF3-203ENST00000491165 UQCC3Q6UW78 93 aa19.64■□□□□ 0.74
USF3-203ENST00000491165 UNQ6126/PRO20091Q6UXV3 157 aa19.64■□□□□ 0.74
USF3-203ENST00000491165 DCUN1D4Q92564 292 aa19.64■□□□□ 0.74
USF3-203ENST00000491165 MARC2Q969Z3 335 aa19.64■□□□□ 0.74
USF3-203ENST00000491165 NARS2Q96I59 477 aaKnown RBP19.64■□□□□ 0.74
USF3-203ENST00000491165 BANF2Q9H503 90 aa19.64■□□□□ 0.74
USF3-203ENST00000491165 PROCRQ9UNN8 238 aa19.64■□□□□ 0.74
USF3-203ENST00000491165 ZNF587BE7ETH6 402 aa19.64■□□□□ 0.73
USF3-203ENST00000491165 DNASE2O00115 360 aaPredicted RBP19.64■□□□□ 0.73
USF3-203ENST00000491165 SIGLEC5O15389 551 aa19.64■□□□□ 0.73
USF3-203ENST00000491165 TSPAN9O75954 239 aa19.64■□□□□ 0.73
USF3-203ENST00000491165 PGAM2P15259 253 aa19.64■□□□□ 0.73
USF3-203ENST00000491165 IGHV1-2P23083 117 aa19.64■□□□□ 0.73
USF3-203ENST00000491165 ADORA2A-AS1P86434 159 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms