RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	FAM3A	P98173	230 aa		5.51	□□□□□ -1.53
FN1-223	ENST00000490833	DBP	Q10586	325 aa	Predicted RBP	5.51	□□□□□ -1.53
FN1-223	ENST00000490833	PLA2G7	Q13093	441 aa		5.51	□□□□□ -1.53
FN1-223	ENST00000490833	IL13RA2	Q14627	380 aa		5.51	□□□□□ -1.53
FN1-223	ENST00000490833	OR1C1	Q15619	314 aa		5.51	□□□□□ -1.53
FN1-223	ENST00000490833	CSRP2	Q16527	193 aa		5.51	□□□□□ -1.53
FN1-223	ENST00000490833	RSPO1	Q2MKA7	263 aa	Predicted RBP	5.51	□□□□□ -1.53
FN1-223	ENST00000490833	TOR2A	Q5JU69	321 aa		5.51	□□□□□ -1.53
FN1-223	ENST00000490833	STPG1	Q5TH74	334 aa		5.51	□□□□□ -1.53
FN1-223	ENST00000490833	PLCXD3	Q63HM9	321 aa		5.51	□□□□□ -1.53
FN1-223	ENST00000490833	SIGIRR	Q6IA17	410 aa		5.51	□□□□□ -1.53
FN1-223	ENST00000490833	OR2A2	Q6IF42	318 aa		5.51	□□□□□ -1.53
FN1-223	ENST00000490833	MOB1B	Q7L9L4	216 aa		5.51	□□□□□ -1.53
FN1-223	ENST00000490833	MRPL21	Q7Z2W9	205 aa	Known RBP	5.51	□□□□□ -1.53
FN1-223	ENST00000490833	YRDC	Q86U90	279 aa	Known RBP	5.51	□□□□□ -1.53
FN1-223	ENST00000490833	ZDHHC23	Q8IYP9	409 aa		5.51	□□□□□ -1.53
FN1-223	ENST00000490833	SVBP	Q8N300	66 aa		5.51	□□□□□ -1.53
FN1-223	ENST00000490833	SPERT	Q8NA61	448 aa		5.51	□□□□□ -1.53
FN1-223	ENST00000490833	TMEM104	Q8NE00	496 aa		5.51	□□□□□ -1.53
FN1-223	ENST00000490833	BVES	Q8NE79	360 aa		5.51	□□□□□ -1.53
FN1-223	ENST00000490833	OR10K1	Q8NGX5	313 aa		5.51	□□□□□ -1.53
FN1-223	ENST00000490833	CASTOR1	Q8WTX7	329 aa		5.51	□□□□□ -1.53
FN1-223	ENST00000490833	DCUN1D4	Q92564	292 aa		5.51	□□□□□ -1.53
FN1-223	ENST00000490833	IL22RA2	Q969J5	263 aa		5.51	□□□□□ -1.53
FN1-223	ENST00000490833	ARL11	Q969Q4	196 aa		5.51	□□□□□ -1.53
FN1-223	ENST00000490833	BOD1	Q96IK1	185 aa		5.51	□□□□□ -1.53
FN1-223	ENST00000490833	LYZL4	Q96KX0	146 aa		5.51	□□□□□ -1.53
FN1-223	ENST00000490833	GUCD1	Q96NT3	240 aa		5.51	□□□□□ -1.53
FN1-223	ENST00000490833	UCN2	Q96RP3	112 aa		5.51	□□□□□ -1.53
FN1-223	ENST00000490833	NPAS1	Q99742	590 aa		5.51	□□□□□ -1.53
FN1-223	ENST00000490833	ZNF2	Q9BSG1	426 aa	Predicted RBP	5.51	□□□□□ -1.53
FN1-223	ENST00000490833	PKIB	Q9C010	78 aa		5.51	□□□□□ -1.53
FN1-223	ENST00000490833	SLC25A31	Q9H0C2	315 aa		5.51	□□□□□ -1.53
FN1-223	ENST00000490833	ARRDC1-AS1	Q9H2J1	176 aa		5.51	□□□□□ -1.53
FN1-223	ENST00000490833	BANF2	Q9H503	90 aa		5.51	□□□□□ -1.53
FN1-223	ENST00000490833	C5orf66	Q9H5L9	145 aa		5.51	□□□□□ -1.53
FN1-223	ENST00000490833	ZNF703	Q9H7S9	590 aa	Predicted RBP	5.51	□□□□□ -1.53
FN1-223	ENST00000490833	IFT22	Q9H7X7	185 aa		5.51	□□□□□ -1.53
FN1-223	ENST00000490833	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	5.51	□□□□□ -1.53
FN1-223	ENST00000490833	OBP2B	Q9NPH6	170 aa		5.51	□□□□□ -1.53
FN1-223	ENST00000490833	FAM212B	Q9NTI7	297 aa	Predicted RBP	5.51	□□□□□ -1.53
FN1-223	ENST00000490833	ZNF701	Q9NV72	531 aa	Predicted RBP	5.51	□□□□□ -1.53
FN1-223	ENST00000490833	TUBD1	Q9UJT1	453 aa		5.51	□□□□□ -1.53
FN1-223	ENST00000490833	PCDHB10	Q9UN67	800 aa		5.51	□□□□□ -1.53
FN1-223	ENST00000490833	ST3GAL6	Q9Y274	331 aa		5.51	□□□□□ -1.53
FN1-223	ENST00000490833	POLDIP2	Q9Y2S7	368 aa		5.51	□□□□□ -1.53
FN1-223	ENST00000490833	SPEF1	Q9Y4P9	236 aa		5.51	□□□□□ -1.53
FN1-223	ENST00000490833	PI4KA	P42356	2102 aa		5.51	□□□□□ -1.53
FN1-223	ENST00000490833	CACNA1C	Q13936	2221 aa		5.51	□□□□□ -1.53
FN1-223	ENST00000490833	TRBV6-6	A0A0A6YYG2	114 aa		5.5	□□□□□ -1.53
FN1-223	ENST00000490833	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	5.5	□□□□□ -1.53
FN1-223	ENST00000490833	FAM230A	A0A1W2PPH8	454 aa		5.5	□□□□□ -1.53
FN1-223	ENST00000490833	LRRC3C	A6NJW4	275 aa		5.5	□□□□□ -1.53
FN1-223	ENST00000490833	C9orf172	C9J069	976 aa		5.5	□□□□□ -1.53
FN1-223	ENST00000490833	EEF1E1-BLOC1S5	C9J1V9	151 aa		5.5	□□□□□ -1.53
FN1-223	ENST00000490833		K7EPK0	472 aa		5.5	□□□□□ -1.53
FN1-223	ENST00000490833	HSPA12A	O43301	675 aa		5.5	□□□□□ -1.53
FN1-223	ENST00000490833	NME2P1	O60361	137 aa		5.5	□□□□□ -1.53
FN1-223	ENST00000490833	LMX1B	O60663	402 aa		5.5	□□□□□ -1.53
FN1-223	ENST00000490833	NEURL1	O76050	574 aa		5.5	□□□□□ -1.53
FN1-223	ENST00000490833	WISP1	O95388	367 aa		5.5	□□□□□ -1.53
FN1-223	ENST00000490833	SIX6	O95475	246 aa		5.5	□□□□□ -1.53
FN1-223	ENST00000490833	OPN1LW	P04000	364 aa		5.5	□□□□□ -1.53
FN1-223	ENST00000490833	MMP7	P09237	267 aa	Predicted RBP	5.5	□□□□□ -1.53
FN1-223	ENST00000490833	WNT2	P09544	360 aa		5.5	□□□□□ -1.53
FN1-223	ENST00000490833	SLC2A1	P11166	492 aa		5.5	□□□□□ -1.53
FN1-223	ENST00000490833	SLC25A6	P12236	298 aa		5.5	□□□□□ -1.53
FN1-223	ENST00000490833	NME2	P22392	152 aa		5.5	□□□□□ -1.53
FN1-223	ENST00000490833	CHAT	P28329	748 aa		5.5	□□□□□ -1.53
FN1-223	ENST00000490833	CD200	P41217	278 aa		5.5	□□□□□ -1.53
FN1-223	ENST00000490833	KCNJ3	P48549	501 aa		5.5	□□□□□ -1.53
FN1-223	ENST00000490833	NPY4R	P50391	375 aa		5.5	□□□□□ -1.53
FN1-223	ENST00000490833	LHX2	P50458	406 aa		5.5	□□□□□ -1.53
FN1-223	ENST00000490833	RBM11	P57052	281 aa	Known RBP	5.5	□□□□□ -1.53
FN1-223	ENST00000490833	RAB2A	P61019	212 aa		5.5	□□□□□ -1.53
FN1-223	ENST00000490833	FGF12	P61328	243 aa		5.5	□□□□□ -1.53
FN1-223	ENST00000490833	GNG3	P63215	75 aa		5.5	□□□□□ -1.53
FN1-223	ENST00000490833	ZNF266	Q14584	549 aa		5.5	□□□□□ -1.53
FN1-223	ENST00000490833	TBC1D28	Q2M2D7	210 aa		5.5	□□□□□ -1.53
FN1-223	ENST00000490833	PABPC1L2A	Q5JQF8	200 aa		5.5	□□□□□ -1.53
FN1-223	ENST00000490833	WIPI1	Q5MNZ9	446 aa	Predicted RBP	5.5	□□□□□ -1.53
FN1-223	ENST00000490833	AADACL3	Q5VUY0	350 aa		5.5	□□□□□ -1.53
FN1-223	ENST00000490833	DCAF12L2	Q5VW00	463 aa		5.5	□□□□□ -1.53
FN1-223	ENST00000490833	OR52W1	Q6IF63	320 aa		5.5	□□□□□ -1.53
FN1-223	ENST00000490833	ZNF774	Q6NX45	483 aa		5.5	□□□□□ -1.53
FN1-223	ENST00000490833	IGF2-AS	Q6U949	168 aa		5.5	□□□□□ -1.53
FN1-223	ENST00000490833	BIVM	Q86UB2	503 aa		5.5	□□□□□ -1.53
FN1-223	ENST00000490833	LSR	Q86X29	649 aa	Predicted RBP	5.5	□□□□□ -1.53
FN1-223	ENST00000490833	IL22RA1	Q8N6P7	574 aa		5.5	□□□□□ -1.53
FN1-223	ENST00000490833	GVQW1	Q8N7I0	195 aa		5.5	□□□□□ -1.53
FN1-223	ENST00000490833	ZNF565	Q8N9K5	539 aa		5.5	□□□□□ -1.53
FN1-223	ENST00000490833	ZFP62	Q8NB50	900 aa	Predicted RBP	5.5	□□□□□ -1.53
FN1-223	ENST00000490833	GALNT11	Q8NCW6	608 aa		5.5	□□□□□ -1.53
FN1-223	ENST00000490833	LFNG	Q8NES3	379 aa		5.5	□□□□□ -1.53
FN1-223	ENST00000490833	PSMF1	Q92530	271 aa		5.5	□□□□□ -1.53
FN1-223	ENST00000490833	GMPPA	Q96IJ6	420 aa	Predicted RBP	5.5	□□□□□ -1.53
FN1-223	ENST00000490833	ZNF75A	Q96N20	296 aa		5.5	□□□□□ -1.53
FN1-223	ENST00000490833	MICU1	Q9BPX6	476 aa		5.5	□□□□□ -1.53
FN1-223	ENST00000490833	SLX1A	Q9BQ83	275 aa		5.5	□□□□□ -1.53
FN1-223	ENST00000490833	MESP1	Q9BRJ9	268 aa		5.5	□□□□□ -1.53

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