RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 FRRS1LQ9P0K9 344 aa18.73■□□□□ 0.59
COL9A3-213ENST00000489045 AASSQ9UDR5 926 aa18.73■□□□□ 0.59
COL9A3-213ENST00000489045 hCG_1809904A0A1W2PP81 198 aa18.72■□□□□ 0.59
COL9A3-213ENST00000489045 A0A1W2PPE2 198 aa18.72■□□□□ 0.59
COL9A3-213ENST00000489045 A0A1W2PR64 198 aa18.72■□□□□ 0.59
COL9A3-213ENST00000489045 A0A1W2PRV1 198 aa18.72■□□□□ 0.59
COL9A3-213ENST00000489045 SLC16A6O15403 523 aa18.72■□□□□ 0.59
COL9A3-213ENST00000489045 ZNF737O75373 536 aa18.72■□□□□ 0.59
COL9A3-213ENST00000489045 CLPXO76031 633 aa18.72■□□□□ 0.59
COL9A3-213ENST00000489045 CHRM2P08172 466 aa18.72■□□□□ 0.59
COL9A3-213ENST00000489045 COX7A1P24310 79 aa18.72■□□□□ 0.59
COL9A3-213ENST00000489045 TGFBR2P37173 567 aa18.72■□□□□ 0.59
COL9A3-213ENST00000489045 BMXP51813 675 aa18.72■□□□□ 0.59
COL9A3-213ENST00000489045 NANOS3P60323 173 aaKnown RBP18.72■□□□□ 0.59
COL9A3-213ENST00000489045 ZNF782Q6ZMW2 699 aaPredicted RBP18.72■□□□□ 0.59
COL9A3-213ENST00000489045 KCTD20Q7Z5Y7 419 aa18.72■□□□□ 0.59
COL9A3-213ENST00000489045 EMG1Q92979 244 aaKnown RBP18.72■□□□□ 0.59
COL9A3-213ENST00000489045 SSX3Q99909 188 aa18.72■□□□□ 0.59
COL9A3-213ENST00000489045 PPA2Q9H2U2 334 aa18.72■□□□□ 0.59
COL9A3-213ENST00000489045 C16orf95Q9H693 158 aa18.72■□□□□ 0.59
COL9A3-213ENST00000489045 IGKV1-9A0A0C4DH69 117 aa18.71■□□□□ 0.59
COL9A3-213ENST00000489045 WIPF1O43516 503 aa18.71■□□□□ 0.59
COL9A3-213ENST00000489045 HTR1AP08908 422 aa18.71■□□□□ 0.59
COL9A3-213ENST00000489045 PAX6P26367 422 aa18.71■□□□□ 0.59
COL9A3-213ENST00000489045 RBP2P50120 134 aa18.71■□□□□ 0.59
COL9A3-213ENST00000489045 ATP1B3P54709 279 aa18.71■□□□□ 0.59
COL9A3-213ENST00000489045 DLX6P56179 175 aa18.71■□□□□ 0.59
COL9A3-213ENST00000489045 FDX2Q6P4F2 183 aa18.71■□□□□ 0.59
COL9A3-213ENST00000489045 EGFL6Q8IUX8 553 aa18.71■□□□□ 0.59
COL9A3-213ENST00000489045 ACBD7Q8N6N7 88 aa18.71■□□□□ 0.59
COL9A3-213ENST00000489045 DNAAF1Q8NEP3 725 aa18.71■□□□□ 0.59
COL9A3-213ENST00000489045 FGGYQ96C11 551 aa18.71■□□□□ 0.59
COL9A3-213ENST00000489045 IL36RNQ9UBH0 155 aa18.71■□□□□ 0.59
COL9A3-213ENST00000489045 EXOGQ9Y2C4 368 aaKnown RBP18.71■□□□□ 0.59
COL9A3-213ENST00000489045 GMPPBQ9Y5P6 360 aa18.71■□□□□ 0.59
COL9A3-213ENST00000489045 WNK1Q9H4A3 2382 aa18.71■□□□□ 0.59
COL9A3-213ENST00000489045 MEX3AA1L020 520 aaKnown RBP18.7■□□□□ 0.58
COL9A3-213ENST00000489045 SNTNA6NMZ2 147 aa18.7■□□□□ 0.58
COL9A3-213ENST00000489045 TSPAN9O75954 239 aa18.7■□□□□ 0.58
COL9A3-213ENST00000489045 ISG15P05161 165 aa18.7■□□□□ 0.58
COL9A3-213ENST00000489045 ZNF20P17024 532 aa18.7■□□□□ 0.58
COL9A3-213ENST00000489045 POU3F4P49335 361 aa18.7■□□□□ 0.58
COL9A3-213ENST00000489045 EDDM3BP56851 147 aa18.7■□□□□ 0.58
COL9A3-213ENST00000489045 LY6EQ16553 131 aa18.7■□□□□ 0.58
COL9A3-213ENST00000489045 LRRC75BQ2VPJ9 315 aa18.7■□□□□ 0.58
COL9A3-213ENST00000489045 UTS2BQ765I0 119 aa18.7■□□□□ 0.58
COL9A3-213ENST00000489045 GDPD3Q7L5L3 318 aa18.7■□□□□ 0.58
COL9A3-213ENST00000489045 OR8H2Q8N162 312 aa18.7■□□□□ 0.58
COL9A3-213ENST00000489045 LGALS12Q96DT0 336 aa18.7■□□□□ 0.58
COL9A3-213ENST00000489045 PELI1Q96FA3 418 aa18.7■□□□□ 0.58
COL9A3-213ENST00000489045 C4orf36Q96KX1 117 aa18.7■□□□□ 0.58
COL9A3-213ENST00000489045 MEGF9Q9H1U4 602 aa18.7■□□□□ 0.58
COL9A3-213ENST00000489045 C17orf98A8MV24 154 aa18.69■□□□□ 0.58
COL9A3-213ENST00000489045 J3QLW9 94 aa18.69■□□□□ 0.58
COL9A3-213ENST00000489045 ZNF19P17023 458 aa18.69■□□□□ 0.58
COL9A3-213ENST00000489045 GABRB1P18505 474 aa18.69■□□□□ 0.58
COL9A3-213ENST00000489045 ATF1P18846 271 aa18.69■□□□□ 0.58
COL9A3-213ENST00000489045 AZGP1P25311 298 aaKnown RBP18.69■□□□□ 0.58
COL9A3-213ENST00000489045 NPBWR2P48146 333 aa18.69■□□□□ 0.58
COL9A3-213ENST00000489045 CCR9P51686 369 aa18.69■□□□□ 0.58
COL9A3-213ENST00000489045 ACTA2P62736 377 aa18.69■□□□□ 0.58
COL9A3-213ENST00000489045 ACTG2P63267 376 aa18.69■□□□□ 0.58
COL9A3-213ENST00000489045 ZNF91Q05481 1191 aa18.69■□□□□ 0.58
COL9A3-213ENST00000489045 Q8IYB0 196 aa18.69■□□□□ 0.58
COL9A3-213ENST00000489045 ENTHD1Q8IYW4 607 aa18.69■□□□□ 0.58
COL9A3-213ENST00000489045 OR10AC1Q8NH08 325 aa18.69■□□□□ 0.58
COL9A3-213ENST00000489045 C9orf16Q9BUW7 83 aa18.69■□□□□ 0.58
COL9A3-213ENST00000489045 RBFOX1Q9NWB1 397 aaKnown RBP18.69■□□□□ 0.58
COL9A3-213ENST00000489045 TMEM82A0PJX8 343 aa18.68■□□□□ 0.58
COL9A3-213ENST00000489045 TIMM23O14925 209 aa18.68■□□□□ 0.58
COL9A3-213ENST00000489045 HAND1O96004 215 aa18.68■□□□□ 0.58
COL9A3-213ENST00000489045 CYB5AP00167 134 aa18.68■□□□□ 0.58
COL9A3-213ENST00000489045 BCL3P20749 454 aa18.68■□□□□ 0.58
COL9A3-213ENST00000489045 PRKACBP22694 351 aa18.68■□□□□ 0.58
COL9A3-213ENST00000489045 MTCP1P56278 107 aa18.68■□□□□ 0.58
COL9A3-213ENST00000489045 LGALS4P56470 323 aa18.68■□□□□ 0.58
COL9A3-213ENST00000489045 OR51A4Q8NGJ6 313 aa18.68■□□□□ 0.58
COL9A3-213ENST00000489045 SNX22Q96L94 193 aa18.68■□□□□ 0.58
COL9A3-213ENST00000489045 HHLA2Q9UM44 414 aa18.68■□□□□ 0.58
COL9A3-213ENST00000489045 TRBV2A0A0J9YWF9 115 aa18.67■□□□□ 0.58
COL9A3-213ENST00000489045 OR4C45A6NMZ5 311 aa18.67■□□□□ 0.58
COL9A3-213ENST00000489045 M0QZ24 198 aa18.67■□□□□ 0.58
COL9A3-213ENST00000489045 IGHA1P01876 353 aa18.67■□□□□ 0.58
COL9A3-213ENST00000489045 ZNF728P0DKX0 622 aa18.67■□□□□ 0.58
COL9A3-213ENST00000489045 DBTP11182 482 aaKnown RBP18.67■□□□□ 0.58
COL9A3-213ENST00000489045 EDDM3AQ14507 147 aa18.67■□□□□ 0.58
COL9A3-213ENST00000489045 AANATQ16613 207 aa18.67■□□□□ 0.58
COL9A3-213ENST00000489045 SLC35E4Q6ICL7 350 aa18.67■□□□□ 0.58
COL9A3-213ENST00000489045 LHFPL2Q6ZUX7 228 aa18.67■□□□□ 0.58
COL9A3-213ENST00000489045 TCF23Q7RTU1 214 aa18.67■□□□□ 0.58
COL9A3-213ENST00000489045 LHFPL4Q7Z7J7 247 aa18.67■□□□□ 0.58
COL9A3-213ENST00000489045 LHFPL3Q86UP9 236 aa18.67■□□□□ 0.58
COL9A3-213ENST00000489045 C10orf67Q8IYJ2 551 aa18.67■□□□□ 0.58
COL9A3-213ENST00000489045 FAM58AQ8N1B3 248 aa18.67■□□□□ 0.58
COL9A3-213ENST00000489045 OR13C3Q8NGS6 347 aa18.67■□□□□ 0.58
COL9A3-213ENST00000489045 RFT1Q96AA3 541 aa18.67■□□□□ 0.58
COL9A3-213ENST00000489045 OPALINQ96PE5 141 aa18.67■□□□□ 0.58
COL9A3-213ENST00000489045 SLC29A1Q99808 456 aa18.67■□□□□ 0.58
COL9A3-213ENST00000489045 ALG8Q9BVK2 526 aa18.67■□□□□ 0.58
COL9A3-213ENST00000489045 TCF7L1Q9HCS4 588 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms