RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 SNRPAP09012 282 aaKnown RBP1.73□□□□□ -2.13
RFC4-213ENST00000489028 SYT1P21579 422 aa1.73□□□□□ -2.13
RFC4-213ENST00000489028 IL3RAP26951 378 aa1.73□□□□□ -2.13
RFC4-213ENST00000489028 GTF2H1P32780 548 aa1.73□□□□□ -2.13
RFC4-213ENST00000489028 TUFMP49411 452 aaKnown RBP1.73□□□□□ -2.13
RFC4-213ENST00000489028 XKP51811 444 aa1.73□□□□□ -2.13
RFC4-213ENST00000489028 TAS2R43P59537 309 aa1.73□□□□□ -2.13
RFC4-213ENST00000489028 RPL10AP62906 217 aaKnown RBP1.73□□□□□ -2.13
RFC4-213ENST00000489028 PITPNAQ00169 270 aa1.73□□□□□ -2.13
RFC4-213ENST00000489028 DMC1Q14565 340 aa1.73□□□□□ -2.13
RFC4-213ENST00000489028 TRAM1Q15629 374 aa1.73□□□□□ -2.13
RFC4-213ENST00000489028 CCL15Q16663 113 aa1.73□□□□□ -2.13
RFC4-213ENST00000489028 SPATA24Q86W54 205 aa1.73□□□□□ -2.13
RFC4-213ENST00000489028 GAPTQ8N292 157 aa1.73□□□□□ -2.13
RFC4-213ENST00000489028 SLC25A29Q8N8R3 303 aa1.73□□□□□ -2.13
RFC4-213ENST00000489028 OR4K17Q8NGC6 315 aa1.73□□□□□ -2.13
RFC4-213ENST00000489028 CCDC12Q8WUD4 166 aaPredicted RBP1.73□□□□□ -2.13
RFC4-213ENST00000489028 ORAOV1Q8WV07 137 aa1.73□□□□□ -2.13
RFC4-213ENST00000489028 C17orf50Q8WW18 174 aa1.73□□□□□ -2.13
RFC4-213ENST00000489028 RORBQ92753 470 aa1.73□□□□□ -2.13
RFC4-213ENST00000489028 HGDQ93099 445 aa1.73□□□□□ -2.13
RFC4-213ENST00000489028 S100PBPQ96BU1 408 aa1.73□□□□□ -2.13
RFC4-213ENST00000489028 ZMYND19Q96E35 227 aaPredicted RBP1.73□□□□□ -2.13
RFC4-213ENST00000489028 SMIM8Q96KF7 97 aa1.73□□□□□ -2.13
RFC4-213ENST00000489028 C18orf15Q96N68 181 aa1.73□□□□□ -2.13
RFC4-213ENST00000489028 QKIQ96PU8 341 aaKnown RBP eCLIP1.73□□□□□ -2.13
RFC4-213ENST00000489028 DSN1Q9H410 356 aa1.73□□□□□ -2.13
RFC4-213ENST00000489028 PLEKHF2Q9H8W4 249 aa1.73□□□□□ -2.13
RFC4-213ENST00000489028 C21orf62Q9NYP8 219 aa1.73□□□□□ -2.13
RFC4-213ENST00000489028 STX18Q9P2W9 335 aaKnown RBP1.73□□□□□ -2.13
RFC4-213ENST00000489028 ENPP5Q9UJA9 477 aa1.73□□□□□ -2.13
RFC4-213ENST00000489028 FARSAQ9Y285 508 aaKnown RBP1.73□□□□□ -2.13
RFC4-213ENST00000489028 CBY1Q9Y3M2 126 aa1.73□□□□□ -2.13
RFC4-213ENST00000489028 LRPPRCP42704 1394 aaKnown RBP1.72□□□□□ -2.13
RFC4-213ENST00000489028 IGHV1-3A0A0C4DH29 117 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 A0A1W2PRG6 482 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 OR2AT4A6NND4 320 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 C9JQL5 133 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 F8VZ95 297 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 SULT1C2O00338 296 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 FABP7O15540 132 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 SGCEO43556 437 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 CALUO43852 315 aaPredicted RBP1.72□□□□□ -2.13
RFC4-213ENST00000489028 CCNKO75909 580 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 TNFAIP8O95379 198 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 SNAP29O95721 258 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 IGLV2-8P01709 118 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 RLN2P04090 185 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 IL4P05112 153 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 CDK1P06493 297 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 SLC35E2BP0CK96 405 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 PSMB9P28065 219 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 MAGEA3P43357 314 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 OR2B6P58173 313 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 CD164Q04900 197 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 PMS2P3Q13401 168 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 BTN1A1Q13410 526 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 TPBGQ13641 420 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 CEACAM16Q2WEN9 425 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 CLEC12AQ5QGZ9 265 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 Q6ZT83 130 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 FAM231DQ6ZW35 169 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 CRLF3Q8IUI8 442 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 IQCF2Q8IXL9 164 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 SELENOHQ8IZQ5 122 aaKnown RBP1.72□□□□□ -2.13
RFC4-213ENST00000489028 ORMDL3Q8N138 153 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 LRRC52Q8N7C0 313 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 NECAP1Q8NC96 275 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 ZNF738Q8NE65 137 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 OR2M7Q8NG81 312 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 OR2Z1Q8NG97 314 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 OR4K2Q8NGD2 314 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 CIRBP-AS1Q8TBR5 109 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 BLNKQ8WV28 456 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 C22orf15Q8WYQ4 148 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 PPWD1Q96BP3 646 aaKnown RBP1.72□□□□□ -2.13
RFC4-213ENST00000489028 PITX2Q99697 317 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 RNF5Q99942 180 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 ZNF649Q9BS31 505 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 BBS2Q9BXC9 721 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 TSGA10Q9BZW7 698 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 IFT46Q9NQC8 304 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 FBXO6Q9NRD1 293 aaPredicted RBP1.72□□□□□ -2.13
RFC4-213ENST00000489028 RBM22Q9NW64 420 aaKnown RBP eCLIP1.72□□□□□ -2.13
RFC4-213ENST00000489028 TAS2R5Q9NYW4 299 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 INSIG2Q9Y5U4 225 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 URGCP-MRPS24S4R325 110 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 COL5A1P20908 1838 aaPredicted RBP1.72□□□□□ -2.13
RFC4-213ENST00000489028 TNS2Q63HR2 1409 aa1.72□□□□□ -2.13
RFC4-213ENST00000489028 DOCK8Q8NF50 2099 aa1.71□□□□□ -2.13
RFC4-213ENST00000489028 AHDC1Q5TGY3 1603 aaPredicted RBP1.71□□□□□ -2.14
RFC4-213ENST00000489028 LOC102724200A0A096LPH7 203 aaPredicted RBP1.71□□□□□ -2.14
RFC4-213ENST00000489028 KIR2DS1A0A191URI9 304 aa1.71□□□□□ -2.14
RFC4-213ENST00000489028 TMEM213A2RRL7 107 aa1.71□□□□□ -2.14
RFC4-213ENST00000489028 ZNF850A8MQ14 1090 aa1.71□□□□□ -2.14
RFC4-213ENST00000489028 CLDN34H7C241 214 aa1.71□□□□□ -2.14
RFC4-213ENST00000489028 UPK1AO00322 258 aa1.71□□□□□ -2.14
RFC4-213ENST00000489028 CDIPTO14735 213 aa1.71□□□□□ -2.14
RFC4-213ENST00000489028 SLC37A4O43826 429 aa1.71□□□□□ -2.14
RFC4-213ENST00000489028 SHOX2O60902 331 aaPredicted RBP1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms