RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 FAM90A20PA6NIJ5 464 aa13.48□□□□□ -0.25
CLDN11-208ENST00000488989 FAM90A8PA6NJQ4 464 aa13.48□□□□□ -0.25
CLDN11-208ENST00000488989 FAM90A7PA6NKC0 464 aa13.48□□□□□ -0.25
CLDN11-208ENST00000488989 FOXI3A8MTJ6 420 aaPredicted RBP13.48□□□□□ -0.25
CLDN11-208ENST00000488989 FAM90A22PA8MWA6 464 aa13.48□□□□□ -0.25
CLDN11-208ENST00000488989 FAM90A12PA8MX19 464 aa13.48□□□□□ -0.25
CLDN11-208ENST00000488989 FAM90A5PA8MXJ8 464 aa13.48□□□□□ -0.25
CLDN11-208ENST00000488989 FAM90A23PA8MXZ1 464 aa13.48□□□□□ -0.25
CLDN11-208ENST00000488989 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.48□□□□□ -0.25
CLDN11-208ENST00000488989 RAB27BO00194 218 aa13.48□□□□□ -0.25
CLDN11-208ENST00000488989 SCGNO76038 276 aa13.48□□□□□ -0.25
CLDN11-208ENST00000488989 TPPPO94811 219 aa13.48□□□□□ -0.25
CLDN11-208ENST00000488989 FAM90A15PP0C7V4 464 aa13.48□□□□□ -0.25
CLDN11-208ENST00000488989 FAM90A13PP0C7W8 464 aa13.48□□□□□ -0.25
CLDN11-208ENST00000488989 FAM90A14PP0C7W9 464 aa13.48□□□□□ -0.25
CLDN11-208ENST00000488989 FAM90A24PP0C7X0 464 aa13.48□□□□□ -0.25
CLDN11-208ENST00000488989 RBM11P57052 281 aaKnown RBP13.48□□□□□ -0.25
CLDN11-208ENST00000488989 IL13RA2Q14627 380 aa13.48□□□□□ -0.25
CLDN11-208ENST00000488989 CNIH2Q6PI25 160 aa13.48□□□□□ -0.25
CLDN11-208ENST00000488989 METAP1DQ6UB28 335 aaPredicted RBP13.48□□□□□ -0.25
CLDN11-208ENST00000488989 ACP7Q6ZNF0 438 aa13.48□□□□□ -0.25
CLDN11-208ENST00000488989 LINC00596Q86U02 117 aa13.48□□□□□ -0.25
CLDN11-208ENST00000488989 FAM90A1Q86YD7 464 aa13.48□□□□□ -0.25
CLDN11-208ENST00000488989 S100A16Q96FQ6 103 aaKnown RBP13.48□□□□□ -0.25
CLDN11-208ENST00000488989 SELENOIQ9C0D9 397 aa13.48□□□□□ -0.25
CLDN11-208ENST00000488989 SEBOXQ9HB31 216 aaPredicted RBP13.48□□□□□ -0.25
CLDN11-208ENST00000488989 AKIP1Q9NQ31 210 aa13.48□□□□□ -0.25
CLDN11-208ENST00000488989 NPTNQ9Y639 398 aa13.48□□□□□ -0.25
CLDN11-208ENST00000488989 CRYBG3Q68DQ2 2970 aa13.48□□□□□ -0.25
CLDN11-208ENST00000488989 PTPN13Q12923 2485 aa13.48□□□□□ -0.25
CLDN11-208ENST00000488989 IGHV1-69-2A0A0G2JMI3 117 aa13.47□□□□□ -0.25
CLDN11-208ENST00000488989 FAM25AB3EWG3 89 aa13.47□□□□□ -0.25
CLDN11-208ENST00000488989 FAM25CB3EWG5 89 aa13.47□□□□□ -0.25
CLDN11-208ENST00000488989 FAM25GB3EWG6 89 aa13.47□□□□□ -0.25
CLDN11-208ENST00000488989 CHRM2P08172 466 aa13.47□□□□□ -0.25
CLDN11-208ENST00000488989 INHBBP09529 407 aa13.47□□□□□ -0.25
CLDN11-208ENST00000488989 EGR1P18146 543 aa13.47□□□□□ -0.25
CLDN11-208ENST00000488989 GLRA1P23415 457 aa13.47□□□□□ -0.25
CLDN11-208ENST00000488989 CPT2P23786 658 aa13.47□□□□□ -0.25
CLDN11-208ENST00000488989 MNDAP41218 407 aa13.47□□□□□ -0.25
CLDN11-208ENST00000488989 ZNF146Q15072 292 aa13.47□□□□□ -0.25
CLDN11-208ENST00000488989 RAB12Q6IQ22 244 aa13.47□□□□□ -0.25
CLDN11-208ENST00000488989 TGIF2LYQ8IUE0 185 aa13.47□□□□□ -0.25
CLDN11-208ENST00000488989 OR4M1Q8NGD0 313 aa13.47□□□□□ -0.25
CLDN11-208ENST00000488989 EMG1Q92979 244 aaKnown RBP13.47□□□□□ -0.25
CLDN11-208ENST00000488989 MARVELD3Q96A59 401 aa13.47□□□□□ -0.25
CLDN11-208ENST00000488989 DIRAS2Q96HU8 199 aa13.47□□□□□ -0.25
CLDN11-208ENST00000488989 NICN1Q9BSH3 213 aa13.47□□□□□ -0.25
CLDN11-208ENST00000488989 TMEM106BQ9NUM4 274 aa13.47□□□□□ -0.25
CLDN11-208ENST00000488989 ST3GAL6Q9Y274 331 aa13.47□□□□□ -0.25
CLDN11-208ENST00000488989 PLEKHA6Q9Y2H5 1048 aa13.47□□□□□ -0.25
CLDN11-208ENST00000488989 LRRC30A6NM36 301 aa13.46□□□□□ -0.25
CLDN11-208ENST00000488989 TMEM178BH3BS89 294 aa13.46□□□□□ -0.25
CLDN11-208ENST00000488989 WNT9BO14905 357 aa13.46□□□□□ -0.25
CLDN11-208ENST00000488989 XRCC3O43542 346 aa13.46□□□□□ -0.25
CLDN11-208ENST00000488989 RP2O75695 350 aa13.46□□□□□ -0.25
CLDN11-208ENST00000488989 NXPH2O95156 264 aa13.46□□□□□ -0.25
CLDN11-208ENST00000488989 FSTL3O95633 263 aa13.46□□□□□ -0.25
CLDN11-208ENST00000488989 KNG1P01042 644 aa13.46□□□□□ -0.25
CLDN11-208ENST00000488989 IRF2P14316 349 aa13.46□□□□□ -0.25
CLDN11-208ENST00000488989 PRKACAP17612 351 aa13.46□□□□□ -0.25
CLDN11-208ENST00000488989 PTBP1P26599 531 aaKnown RBP eCLIP13.46□□□□□ -0.25
CLDN11-208ENST00000488989 CDKN1AP38936 164 aa13.46□□□□□ -0.25
CLDN11-208ENST00000488989 MPV17LQ2QL34 196 aa13.46□□□□□ -0.25
CLDN11-208ENST00000488989 SMIM21Q3B7S5 101 aa13.46□□□□□ -0.25
CLDN11-208ENST00000488989 PIGYQ3MUY2 71 aa13.46□□□□□ -0.25
CLDN11-208ENST00000488989 SPIN3Q5JUX0 258 aa13.46□□□□□ -0.25
CLDN11-208ENST00000488989 TEX36Q5VZQ5 186 aa13.46□□□□□ -0.25
CLDN11-208ENST00000488989 C1orf87Q8N0U7 546 aa13.46□□□□□ -0.25
CLDN11-208ENST00000488989 BATF2Q8N1L9 274 aa13.46□□□□□ -0.25
CLDN11-208ENST00000488989 MFSD4AQ8N468 514 aa13.46□□□□□ -0.25
CLDN11-208ENST00000488989 OR56B1Q8NGI3 324 aa13.46□□□□□ -0.25
CLDN11-208ENST00000488989 S100ZQ8WXG8 99 aa13.46□□□□□ -0.25
CLDN11-208ENST00000488989 RDH5Q92781 318 aa13.46□□□□□ -0.25
CLDN11-208ENST00000488989 YIPF5Q969M3 257 aa13.46□□□□□ -0.25
CLDN11-208ENST00000488989 CCL19Q99731 98 aa13.46□□□□□ -0.25
CLDN11-208ENST00000488989 ATG5Q9H1Y0 275 aa13.46□□□□□ -0.25
CLDN11-208ENST00000488989 WDR13Q9H1Z4 485 aa13.46□□□□□ -0.25
CLDN11-208ENST00000488989 IFT22Q9H7X7 185 aa13.46□□□□□ -0.25
CLDN11-208ENST00000488989 DIABLOQ9NR28 239 aa13.46□□□□□ -0.25
CLDN11-208ENST00000488989 DLL4Q9NR61 685 aa13.46□□□□□ -0.25
CLDN11-208ENST00000488989 RABL2AQ9UBK7 228 aaPredicted RBP13.46□□□□□ -0.25
CLDN11-208ENST00000488989 EXTL2Q9UBQ6 330 aa13.46□□□□□ -0.25
CLDN11-208ENST00000488989 RABL2BQ9UNT1 228 aa13.46□□□□□ -0.25
CLDN11-208ENST00000488989 CACNG2Q9Y698 323 aa13.46□□□□□ -0.25
CLDN11-208ENST00000488989 C3orf80F5H4A9 247 aa13.45□□□□□ -0.26
CLDN11-208ENST00000488989 GEMIN2O14893 280 aaKnown RBP13.45□□□□□ -0.26
CLDN11-208ENST00000488989 CYB5R3P00387 301 aaPredicted RBP13.45□□□□□ -0.26
CLDN11-208ENST00000488989 F12P00748 615 aaPredicted RBP13.45□□□□□ -0.26
CLDN11-208ENST00000488989 PAX1P15863 534 aa13.45□□□□□ -0.26
CLDN11-208ENST00000488989 CDK2P24941 298 aa13.45□□□□□ -0.26
CLDN11-208ENST00000488989 COL8A2P25067 703 aa13.45□□□□□ -0.26
CLDN11-208ENST00000488989 TALDO1P37837 337 aa13.45□□□□□ -0.26
CLDN11-208ENST00000488989 NR4A2P43354 598 aa13.45□□□□□ -0.26
CLDN11-208ENST00000488989 PITPNBP48739 271 aa13.45□□□□□ -0.26
CLDN11-208ENST00000488989 VEGFCP49767 419 aa13.45□□□□□ -0.26
CLDN11-208ENST00000488989 EFNA4P52798 201 aa13.45□□□□□ -0.26
CLDN11-208ENST00000488989 TMEM50BP56557 158 aa13.45□□□□□ -0.26
CLDN11-208ENST00000488989 TAF9Q16594 264 aa13.45□□□□□ -0.26
CLDN11-208ENST00000488989 MOGAT2Q3SYC2 334 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms