RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 SDC1P18827 310 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 LOXP28300 417 aaPredicted RBP3.81□□□□□ -1.8
RTN4-213ENST00000485749 IL12AP29459 219 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 RPL3P39023 403 aaKnown RBP3.81□□□□□ -1.8
RTN4-213ENST00000485749 LGALS7P47929 136 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 FOXG1P55316 489 aaPredicted RBP3.81□□□□□ -1.8
RTN4-213ENST00000485749 FBXW4P57775 412 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 HILS1P60008 231 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 MAXP61244 160 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 PITX1P78337 314 aaPredicted RBP3.81□□□□□ -1.8
RTN4-213ENST00000485749 CX3CL1P78423 397 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 PSG4Q00888 419 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 RAB40BQ12829 278 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 FOXF2Q12947 444 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 FAM53BQ14153 422 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 ZNF284Q2VY69 593 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 PARP15Q460N3 678 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 PHLDA2Q53GA4 152 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 TRMT12Q53H54 448 aaKnown RBP3.81□□□□□ -1.8
RTN4-213ENST00000485749 CYBRD1Q53TN4 286 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 TMEM78Q5T7P6 136 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 REP15Q6BDI9 236 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 HAGHLQ6PII5 290 aaPredicted RBP3.81□□□□□ -1.8
RTN4-213ENST00000485749 OPN5Q6U736 354 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 TFAP2EQ6VUC0 442 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 FAM231DQ6ZW35 169 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 FAM19A1Q7Z5A9 133 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 OR4N5Q8IXE1 308 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 PDZD9Q8IXQ8 264 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 SLC22A15Q8IZD6 547 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 CBR4Q8N4T8 237 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 PRELID2Q8N945 189 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 LRTM2Q8N967 370 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 GATD1Q8NB37 220 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 ZNF740Q8NDX6 193 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 MDS2Q8NDY4 140 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 ACVR1CQ8NER5 493 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 TSTD1Q8NFU3 115 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 OR4C13Q8NGP0 309 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 OR1L8Q8NGR8 309 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 OR5R1Q8NH85 324 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 MFSD8Q8NHS3 518 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 MPLKIPQ8TAP9 179 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 HMGCLL1Q8TB92 370 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 GNPDA2Q8TDQ7 276 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 NTN5Q8WTR8 489 aaPredicted RBP3.81□□□□□ -1.8
RTN4-213ENST00000485749 TMED6Q8WW62 240 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 CRYGNQ8WXF5 182 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 DYRK2Q92630 601 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 TOMM40LQ969M1 308 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 ARL11Q969Q4 196 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 MRPL24Q96A35 216 aaKnown RBP3.81□□□□□ -1.8
RTN4-213ENST00000485749 FGGYQ96C11 551 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 GALMQ96C23 342 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 ROPN1LQ96C74 230 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 LRRC58Q96CX6 371 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 DDIT4LQ96D03 193 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 DNAJC19Q96DA6 116 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 ZMYND19Q96E35 227 aaPredicted RBP3.81□□□□□ -1.8
RTN4-213ENST00000485749 DYNLL2Q96FJ2 89 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 CMTM7Q96FZ5 175 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 REEP6Q96HR9 211 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 DNAJC30Q96LL9 226 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 TBX15Q96SF7 602 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 CSF3RQ99062 836 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 CDX2Q99626 313 aaPredicted RBP3.81□□□□□ -1.8
RTN4-213ENST00000485749 PDCD1LG2Q9BQ51 273 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 HSPB9Q9BQS6 159 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 MARVELD1Q9BSK0 173 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 TMEM121Q9BTD3 319 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 C1orf50Q9BV19 199 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 CXXC4Q9H2H0 198 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 KLK15Q9H2R5 256 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 RBKSQ9H477 322 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 RNF167Q9H6Y7 350 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 ZDHHC11Q9H8X9 412 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 ZNF556Q9HAH1 456 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 ADGRL4Q9HBW9 690 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 UBE2TQ9NPD8 197 aaPredicted RBP3.81□□□□□ -1.8
RTN4-213ENST00000485749 SDR39U1Q9NRG7 319 aaPredicted RBP3.81□□□□□ -1.8
RTN4-213ENST00000485749 RSL24D1Q9UHA3 163 aaKnown RBP3.81□□□□□ -1.8
RTN4-213ENST00000485749 HSPB8Q9UJY1 196 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 PILRBQ9UKJ0 227 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 POLR2AP24928 1970 aaKnown RBP3.81□□□□□ -1.8
RTN4-213ENST00000485749 C4AP0C0L4 1744 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 C4BP0C0L5 1744 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 LRP6O75581 1613 aa3.81□□□□□ -1.8
RTN4-213ENST00000485749 IGHV4-28A0A0C4DH34 117 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 CIB4A0PJX0 185 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 TMEM150BA6NC51 233 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 LINC01548A6NM66 108 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 CEACAM18A8MTB9 384 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 I3L4J1 428 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 HSD17B6O14756 317 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 TIMM23O14925 209 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 MLNRO43193 412 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 RENP00797 406 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 MPC1LP0DKB6 136 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 CD59P13987 128 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 RAB3BP20337 219 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms