RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 KLHDC1Q8N7A1 406 aa13.89□□□□□ -0.19
SMC4-216ENST00000485645 C11orf44Q8N8P7 122 aa13.89□□□□□ -0.19
SMC4-216ENST00000485645 CCDC54Q8NEL0 328 aa13.89□□□□□ -0.19
SMC4-216ENST00000485645 NKX3-1Q99801 234 aaPredicted RBP13.89□□□□□ -0.19
SMC4-216ENST00000485645 MTCH1Q9NZJ7 389 aa13.89□□□□□ -0.19
SMC4-216ENST00000485645 TBL2Q9Y4P3 447 aaKnown RBP13.89□□□□□ -0.19
SMC4-216ENST00000485645 A0A0G2JK05 382 aa13.88□□□□□ -0.19
SMC4-216ENST00000485645 VGLL3A8MV65 326 aa13.88□□□□□ -0.19
SMC4-216ENST00000485645 CHST1O43916 411 aa13.88□□□□□ -0.19
SMC4-216ENST00000485645 ZNF737O75373 536 aa13.88□□□□□ -0.19
SMC4-216ENST00000485645 GATBO75879 557 aaKnown RBP13.88□□□□□ -0.19
SMC4-216ENST00000485645 SULT1C4O75897 302 aa13.88□□□□□ -0.19
SMC4-216ENST00000485645 SERPINA3P01011 423 aa13.88□□□□□ -0.19
SMC4-216ENST00000485645 ARG1P05089 322 aa13.88□□□□□ -0.19
SMC4-216ENST00000485645 ZNF728P0DKX0 622 aa13.88□□□□□ -0.19
SMC4-216ENST00000485645 ATP6V1E1P36543 226 aa13.88□□□□□ -0.19
SMC4-216ENST00000485645 C10orf67Q8IYJ2 551 aa13.88□□□□□ -0.19
SMC4-216ENST00000485645 OR10H4Q8NGA5 316 aa13.88□□□□□ -0.19
SMC4-216ENST00000485645 CFHR4Q92496 578 aa13.88□□□□□ -0.19
SMC4-216ENST00000485645 SLAMF9Q96A28 289 aa13.88□□□□□ -0.19
SMC4-216ENST00000485645 FOXRED1Q96CU9 486 aaPredicted RBP13.88□□□□□ -0.19
SMC4-216ENST00000485645 BORCS8Q96FH0 119 aa13.88□□□□□ -0.19
SMC4-216ENST00000485645 CIB1Q99828 191 aa13.88□□□□□ -0.19
SMC4-216ENST00000485645 ABCB10Q9NRK6 738 aa13.88□□□□□ -0.19
SMC4-216ENST00000485645 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.88□□□□□ -0.19
SMC4-216ENST00000485645 OAZ3Q9UMX2 235 aa13.88□□□□□ -0.19
SMC4-216ENST00000485645 IGKV1-27A0A075B6S5 117 aa13.87□□□□□ -0.19
SMC4-216ENST00000485645 F8VVB4 439 aa13.87□□□□□ -0.19
SMC4-216ENST00000485645 F8VWA3 439 aa13.87□□□□□ -0.19
SMC4-216ENST00000485645 H3BNX3 289 aa13.87□□□□□ -0.19
SMC4-216ENST00000485645 INMTO95050 263 aa13.87□□□□□ -0.19
SMC4-216ENST00000485645 APOL3O95236 402 aa13.87□□□□□ -0.19
SMC4-216ENST00000485645 RBP4P02753 201 aa13.87□□□□□ -0.19
SMC4-216ENST00000485645 VSIG10L2P0DP72 767 aa13.87□□□□□ -0.19
SMC4-216ENST00000485645 FAM189A2Q15884 450 aa13.87□□□□□ -0.19
SMC4-216ENST00000485645 PLA1AQ53H76 456 aa13.87□□□□□ -0.19
SMC4-216ENST00000485645 SLC25A26Q70HW3 274 aa13.87□□□□□ -0.19
SMC4-216ENST00000485645 EGFL6Q8IUX8 553 aa13.87□□□□□ -0.19
SMC4-216ENST00000485645 OR8H2Q8N162 312 aa13.87□□□□□ -0.19
SMC4-216ENST00000485645 DYNAPQ8N1N2 210 aa13.87□□□□□ -0.19
SMC4-216ENST00000485645 C10orf35Q96D05 121 aa13.87□□□□□ -0.19
SMC4-216ENST00000485645 MALSU1Q96EH3 234 aa13.87□□□□□ -0.19
SMC4-216ENST00000485645 SNX22Q96L94 193 aa13.87□□□□□ -0.19
SMC4-216ENST00000485645 OSBPL10Q9BXB5 764 aa13.87□□□□□ -0.19
SMC4-216ENST00000485645 CDCA4Q9BXL8 241 aa13.87□□□□□ -0.19
SMC4-216ENST00000485645 CHST5Q9GZS9 411 aa13.87□□□□□ -0.19
SMC4-216ENST00000485645 DSCAML1Q8TD84 2053 aa13.87□□□□□ -0.19
SMC4-216ENST00000485645 MEX3AA1L020 520 aaKnown RBP13.86□□□□□ -0.19
SMC4-216ENST00000485645 SAC3D1A6NKF1 404 aa13.86□□□□□ -0.19
SMC4-216ENST00000485645 ODF3BA8MYP8 253 aa13.86□□□□□ -0.19
SMC4-216ENST00000485645 OPN1MWP04001 364 aa13.86□□□□□ -0.19
SMC4-216ENST00000485645 OPN1MW2P0DN77 364 aa13.86□□□□□ -0.19
SMC4-216ENST00000485645 OPN1MW3P0DN78 364 aa13.86□□□□□ -0.19
SMC4-216ENST00000485645 IGHV1-8P0DP01 117 aa13.86□□□□□ -0.19
SMC4-216ENST00000485645 POLR2IP36954 125 aaKnown RBP13.86□□□□□ -0.19
SMC4-216ENST00000485645 RAB13P51153 203 aa13.86□□□□□ -0.19
SMC4-216ENST00000485645 MEF2CQ06413 473 aaPredicted RBP13.86□□□□□ -0.19
SMC4-216ENST00000485645 TMED1Q13445 227 aa13.86□□□□□ -0.19
SMC4-216ENST00000485645 CNN3Q15417 329 aaKnown RBP13.86□□□□□ -0.19
SMC4-216ENST00000485645 SSX2Q16385 188 aa13.86□□□□□ -0.19
SMC4-216ENST00000485645 ZNF626Q68DY1 528 aa13.86□□□□□ -0.19
SMC4-216ENST00000485645 HIST2H2BDQ6DRA6 164 aa13.86□□□□□ -0.19
SMC4-216ENST00000485645 FAM220AQ7Z4H9 259 aa13.86□□□□□ -0.19
SMC4-216ENST00000485645 OR11H6Q8NGC7 330 aa13.86□□□□□ -0.19
SMC4-216ENST00000485645 OR8J1Q8NGP2 316 aa13.86□□□□□ -0.19
SMC4-216ENST00000485645 RPS4Y2Q8TD47 263 aa13.86□□□□□ -0.19
SMC4-216ENST00000485645 EMG1Q92979 244 aaKnown RBP13.86□□□□□ -0.19
SMC4-216ENST00000485645 ZNF714Q96N38 554 aa13.86□□□□□ -0.19
SMC4-216ENST00000485645 PITPNC1Q9UKF7 332 aa13.86□□□□□ -0.19
SMC4-216ENST00000485645 TCF19Q9Y242 345 aa13.86□□□□□ -0.19
SMC4-216ENST00000485645 hADV38S2A0JD32 116 aa13.85□□□□□ -0.19
SMC4-216ENST00000485645 MEGF11A6BM72 1044 aa13.85□□□□□ -0.19
SMC4-216ENST00000485645 UBCP0CG48 685 aaKnown RBP13.85□□□□□ -0.19
SMC4-216ENST00000485645 PEX2P28328 305 aa13.85□□□□□ -0.19
SMC4-216ENST00000485645 ATP1B3P54709 279 aa13.85□□□□□ -0.19
SMC4-216ENST00000485645 DYNC1I2Q13409 638 aaKnown RBP13.85□□□□□ -0.19
SMC4-216ENST00000485645 EDDM3AQ14507 147 aa13.85□□□□□ -0.19
SMC4-216ENST00000485645 CCBE1Q6UXH8 406 aaPredicted RBP13.85□□□□□ -0.19
SMC4-216ENST00000485645 Q8IYB0 196 aa13.85□□□□□ -0.19
SMC4-216ENST00000485645 ENTHD1Q8IYW4 607 aa13.85□□□□□ -0.19
SMC4-216ENST00000485645 PRSS35Q8N3Z0 413 aa13.85□□□□□ -0.19
SMC4-216ENST00000485645 PP6455Q8WZ26 134 aa13.85□□□□□ -0.19
SMC4-216ENST00000485645 RFKQ969G6 155 aa13.85□□□□□ -0.19
SMC4-216ENST00000485645 EME1Q96AY2 570 aa13.85□□□□□ -0.19
SMC4-216ENST00000485645 GABARAPL3Q9BY60 117 aa13.85□□□□□ -0.19
SMC4-216ENST00000485645 RIBC2Q9H4K1 309 aa13.85□□□□□ -0.19
SMC4-216ENST00000485645 ZNF702PQ9H963 129 aa13.85□□□□□ -0.19
SMC4-216ENST00000485645 GNG8Q9UK08 70 aa13.85□□□□□ -0.19
SMC4-216ENST00000485645 LOC107986453A0A1B0GWG9 222 aa13.84□□□□□ -0.19
SMC4-216ENST00000485645 TMEM82A0PJX8 343 aa13.84□□□□□ -0.19
SMC4-216ENST00000485645 A6NDX4 124 aa13.84□□□□□ -0.19
SMC4-216ENST00000485645 HAND1O96004 215 aa13.84□□□□□ -0.19
SMC4-216ENST00000485645 CYB5AP00167 134 aa13.84□□□□□ -0.19
SMC4-216ENST00000485645 GABRR1P24046 479 aa13.84□□□□□ -0.19
SMC4-216ENST00000485645 RBP2P50120 134 aa13.84□□□□□ -0.19
SMC4-216ENST00000485645 OR12D2P58182 307 aa13.84□□□□□ -0.19
SMC4-216ENST00000485645 CDC42P60953 191 aa13.84□□□□□ -0.19
SMC4-216ENST00000485645 RDH10Q8IZV5 341 aa13.84□□□□□ -0.19
SMC4-216ENST00000485645 DNAAF1Q8NEP3 725 aa13.84□□□□□ -0.19
SMC4-216ENST00000485645 SEBOXQ9HB31 216 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms