RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 NAV3Q8IVL0 2385 aa9.28□□□□□ -0.92
DDX56-212ENST00000485367 A0A0A6YYH2 397 aa9.28□□□□□ -0.92
DDX56-212ENST00000485367 A6NJ64 397 aa9.28□□□□□ -0.92
DDX56-212ENST00000485367 TMEM212A6NML5 194 aa9.28□□□□□ -0.92
DDX56-212ENST00000485367 M0R1B8 84 aa9.28□□□□□ -0.92
DDX56-212ENST00000485367 UBE2CO00762 179 aa9.28□□□□□ -0.92
DDX56-212ENST00000485367 SMAD7O15105 426 aaKnown RBP9.28□□□□□ -0.92
DDX56-212ENST00000485367 VAMP5O95183 116 aa9.28□□□□□ -0.92
DDX56-212ENST00000485367 WNT11O96014 354 aa9.28□□□□□ -0.92
DDX56-212ENST00000485367 SOD3P08294 240 aa9.28□□□□□ -0.92
DDX56-212ENST00000485367 PAX1P15863 534 aa9.28□□□□□ -0.92
DDX56-212ENST00000485367 PTNP21246 168 aa9.28□□□□□ -0.92
DDX56-212ENST00000485367 BDKRB2P30411 391 aa9.28□□□□□ -0.92
DDX56-212ENST00000485367 TGFBR3Q03167 851 aa9.28□□□□□ -0.92
DDX56-212ENST00000485367 PNLIPRP3Q17RR3 467 aa9.28□□□□□ -0.92
DDX56-212ENST00000485367 NKAPLQ5M9Q1 402 aa9.28□□□□□ -0.92
DDX56-212ENST00000485367 FAM74A1Q5RGS3 127 aa9.28□□□□□ -0.92
DDX56-212ENST00000485367 TMEM108Q6UXF1 575 aa9.28□□□□□ -0.92
DDX56-212ENST00000485367 CIARTQ8N365 385 aaPredicted RBP9.28□□□□□ -0.92
DDX56-212ENST00000485367 KDM8Q8N371 416 aa9.28□□□□□ -0.92
DDX56-212ENST00000485367 MFSD8Q8NHS3 518 aa9.28□□□□□ -0.92
DDX56-212ENST00000485367 THAP6Q8TBB0 222 aa9.28□□□□□ -0.92
DDX56-212ENST00000485367 EDARADDQ8WWZ3 215 aa9.28□□□□□ -0.92
DDX56-212ENST00000485367 RNF166Q96A37 237 aaPredicted RBP9.28□□□□□ -0.92
DDX56-212ENST00000485367 TTTY10Q9BZA0 68 aa9.28□□□□□ -0.92
DDX56-212ENST00000485367 COMMD4Q9H0A8 199 aa9.28□□□□□ -0.92
DDX56-212ENST00000485367 CISD1Q9NZ45 108 aaKnown RBP9.28□□□□□ -0.92
DDX56-212ENST00000485367 IER3IP1Q9Y5U9 82 aa9.28□□□□□ -0.92
DDX56-212ENST00000485367 TLN2Q9Y4G6 2542 aa9.28□□□□□ -0.92
DDX56-212ENST00000485367 LOC100289279A0A1B0GTE1 492 aa9.27□□□□□ -0.92
DDX56-212ENST00000485367 SHISA9B4DS77 424 aa9.27□□□□□ -0.92
DDX56-212ENST00000485367 MCIDASD6RGH6 385 aa9.27□□□□□ -0.92
DDX56-212ENST00000485367 FTCDNL1E5RQL4 147 aa9.27□□□□□ -0.92
DDX56-212ENST00000485367 F8VVB4 439 aa9.27□□□□□ -0.92
DDX56-212ENST00000485367 F8VWA3 439 aa9.27□□□□□ -0.92
DDX56-212ENST00000485367 UPK3AO75631 287 aa9.27□□□□□ -0.92
DDX56-212ENST00000485367 DANCRP0C864 163 aa9.27□□□□□ -0.92
DDX56-212ENST00000485367 PNMTP11086 282 aa9.27□□□□□ -0.92
DDX56-212ENST00000485367 CD79AP11912 226 aa9.27□□□□□ -0.92
DDX56-212ENST00000485367 PTHLHP12272 177 aa9.27□□□□□ -0.92
DDX56-212ENST00000485367 APEHP13798 732 aaKnown RBP9.27□□□□□ -0.92
DDX56-212ENST00000485367 MPZP25189 248 aa9.27□□□□□ -0.92
DDX56-212ENST00000485367 CD34P28906 385 aa9.27□□□□□ -0.92
DDX56-212ENST00000485367 PRPS1P60891 318 aa9.27□□□□□ -0.92
DDX56-212ENST00000485367 BLOC1S1P78537 153 aa9.27□□□□□ -0.92
DDX56-212ENST00000485367 EGR4Q05215 589 aa9.27□□□□□ -0.92
DDX56-212ENST00000485367 ALG10BQ5I7T1 473 aa9.27□□□□□ -0.92
DDX56-212ENST00000485367 FAHD2BQ6P2I3 314 aaPredicted RBP9.27□□□□□ -0.92
DDX56-212ENST00000485367 ULK3Q6PHR2 472 aa9.27□□□□□ -0.92
DDX56-212ENST00000485367 SLC22A25Q6T423 547 aa9.27□□□□□ -0.92
DDX56-212ENST00000485367 DRAM2Q6UX65 266 aa9.27□□□□□ -0.92
DDX56-212ENST00000485367 CLEC9AQ6UXN8 241 aa9.27□□□□□ -0.92
DDX56-212ENST00000485367 WDR31Q8NA23 367 aa9.27□□□□□ -0.92
DDX56-212ENST00000485367 INO80EQ8NBZ0 244 aaPredicted RBP9.27□□□□□ -0.92
DDX56-212ENST00000485367 OR1S2Q8NGQ3 325 aa9.27□□□□□ -0.92
DDX56-212ENST00000485367 RNF141Q8WVD5 230 aa9.27□□□□□ -0.92
DDX56-212ENST00000485367 TAAR8Q969N4 342 aa9.27□□□□□ -0.92
DDX56-212ENST00000485367 FAHD2AQ96GK7 314 aa9.27□□□□□ -0.92
DDX56-212ENST00000485367 NIT2Q9NQR4 276 aa9.27□□□□□ -0.92
DDX56-212ENST00000485367 MMP26Q9NRE1 261 aa9.27□□□□□ -0.92
DDX56-212ENST00000485367 MIOXQ9UGB7 285 aa9.27□□□□□ -0.92
DDX56-212ENST00000485367 OR6C68A6NDL8 312 aa9.27□□□□□ -0.93
DDX56-212ENST00000485367 OVOL3O00110 214 aa9.27□□□□□ -0.93
DDX56-212ENST00000485367 PHYHO14832 338 aa9.27□□□□□ -0.93
DDX56-212ENST00000485367 RAB3DO95716 219 aa9.27□□□□□ -0.93
DDX56-212ENST00000485367 CD74P04233 296 aa9.27□□□□□ -0.93
DDX56-212ENST00000485367 CD3DP04234 171 aa9.27□□□□□ -0.93
DDX56-212ENST00000485367 TPT1P13693 172 aaKnown RBP9.27□□□□□ -0.93
DDX56-212ENST00000485367 CD40P25942 277 aa9.27□□□□□ -0.93
DDX56-212ENST00000485367 CDKN1AP38936 164 aa9.27□□□□□ -0.93
DDX56-212ENST00000485367 SPCS3P61009 180 aa9.27□□□□□ -0.93
DDX56-212ENST00000485367 RAB5BP61020 215 aa9.27□□□□□ -0.93
DDX56-212ENST00000485367 UBE2MP61081 183 aaKnown RBP9.27□□□□□ -0.93
DDX56-212ENST00000485367 EGR3Q06889 387 aa9.27□□□□□ -0.93
DDX56-212ENST00000485367 ECH1Q13011 328 aa9.27□□□□□ -0.93
DDX56-212ENST00000485367 MEF2DQ14814 521 aa9.27□□□□□ -0.93
DDX56-212ENST00000485367 CDNFQ49AH0 187 aa9.27□□□□□ -0.93
DDX56-212ENST00000485367 LIPNQ5VXI9 398 aa9.27□□□□□ -0.93
DDX56-212ENST00000485367 RAB12Q6IQ22 244 aa9.27□□□□□ -0.93
DDX56-212ENST00000485367 C1orf162Q8NEQ5 155 aaPredicted RBP9.27□□□□□ -0.93
DDX56-212ENST00000485367 SLC30A7Q8NEW0 376 aa9.27□□□□□ -0.93
DDX56-212ENST00000485367 WDR13Q9H1Z4 485 aa9.27□□□□□ -0.93
DDX56-212ENST00000485367 SLC2A8Q9NY64 477 aa9.27□□□□□ -0.93
DDX56-212ENST00000485367 AMDHD2Q9Y303 409 aa9.27□□□□□ -0.93
DDX56-212ENST00000485367 NSD1Q96L73 2696 aaPredicted RBP9.26□□□□□ -0.93
DDX56-212ENST00000485367 IGKV1D-42A0A075B6H8 117 aa9.26□□□□□ -0.93
DDX56-212ENST00000485367 TRAV36DV7A0A075B6V5 113 aa9.26□□□□□ -0.93
DDX56-212ENST00000485367 TRAV18A0A075B6X5 111 aa9.26□□□□□ -0.93
DDX56-212ENST00000485367 OR2AT4A6NND4 320 aa9.26□□□□□ -0.93
DDX56-212ENST00000485367 ZNF587BE7ETH6 402 aa9.26□□□□□ -0.93
DDX56-212ENST00000485367 F5H0A9 414 aaPredicted RBP9.26□□□□□ -0.93
DDX56-212ENST00000485367 SLC17A2O00624 439 aa9.26□□□□□ -0.93
DDX56-212ENST00000485367 OR2T1O43869 369 aa9.26□□□□□ -0.93
DDX56-212ENST00000485367 ABHD16AO95870 558 aa9.26□□□□□ -0.93
DDX56-212ENST00000485367 ADCYAP1P18509 176 aa9.26□□□□□ -0.93
DDX56-212ENST00000485367 PRKXP51817 358 aa9.26□□□□□ -0.93
DDX56-212ENST00000485367 CAPZA1P52907 286 aa9.26□□□□□ -0.93
DDX56-212ENST00000485367 CLDN17P56750 224 aa9.26□□□□□ -0.93
DDX56-212ENST00000485367 SPOCK1Q08629 439 aa9.26□□□□□ -0.93
DDX56-212ENST00000485367 DHRS2Q13268 280 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms