RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 CADP27708 2225 aa11.86□□□□□ -0.51
SMAD9-204ENST00000483941 A6NLC8 198 aa11.85□□□□□ -0.51
SMAD9-204ENST00000483941 A6NNC1 897 aa11.85□□□□□ -0.51
SMAD9-204ENST00000483941 F5H5P2 479 aa11.85□□□□□ -0.51
SMAD9-204ENST00000483941 HS3ST1O14792 307 aa11.85□□□□□ -0.51
SMAD9-204ENST00000483941 CTDSPLO15194 276 aa11.85□□□□□ -0.51
SMAD9-204ENST00000483941 SPRY1O43609 319 aaPredicted RBP11.85□□□□□ -0.51
SMAD9-204ENST00000483941 NOS1APO75052 506 aaPredicted RBP11.85□□□□□ -0.51
SMAD9-204ENST00000483941 PLATP00750 562 aa11.85□□□□□ -0.51
SMAD9-204ENST00000483941 LOXP28300 417 aaPredicted RBP11.85□□□□□ -0.51
SMAD9-204ENST00000483941 CFHR2P36980 270 aa11.85□□□□□ -0.51
SMAD9-204ENST00000483941 RPS27AP62979 156 aaKnown RBP11.85□□□□□ -0.51
SMAD9-204ENST00000483941 ZNF154Q13106 437 aa11.85□□□□□ -0.51
SMAD9-204ENST00000483941 MSMPQ1L6U9 139 aa11.85□□□□□ -0.51
SMAD9-204ENST00000483941 PYDC2Q56P42 97 aa11.85□□□□□ -0.51
SMAD9-204ENST00000483941 DMRTC1Q5HYR2 192 aa11.85□□□□□ -0.51
SMAD9-204ENST00000483941 NHLRC3Q5JS37 347 aa11.85□□□□□ -0.51
SMAD9-204ENST00000483941 C16orf87Q6PH81 154 aa11.85□□□□□ -0.51
SMAD9-204ENST00000483941 CALHM1Q8IU99 346 aa11.85□□□□□ -0.51
SMAD9-204ENST00000483941 MFSD4AQ8N468 514 aa11.85□□□□□ -0.51
SMAD9-204ENST00000483941 OR11L1Q8NGX0 322 aa11.85□□□□□ -0.51
SMAD9-204ENST00000483941 ZFAND2BQ8WV99 257 aa11.85□□□□□ -0.51
SMAD9-204ENST00000483941 HPS1Q92902 700 aa11.85□□□□□ -0.51
SMAD9-204ENST00000483941 DVL3Q92997 716 aaPredicted RBP11.85□□□□□ -0.51
SMAD9-204ENST00000483941 SLC25A38Q96DW6 304 aa11.85□□□□□ -0.51
SMAD9-204ENST00000483941 C1orf147Q96MC9 270 aaPredicted RBP11.85□□□□□ -0.51
SMAD9-204ENST00000483941 SOSTQ9BQB4 213 aa11.85□□□□□ -0.51
SMAD9-204ENST00000483941 TM2D1Q9BX74 207 aa11.85□□□□□ -0.51
SMAD9-204ENST00000483941 SELENOIQ9C0D9 397 aa11.85□□□□□ -0.51
SMAD9-204ENST00000483941 CXorf56Q9H5V9 222 aa11.85□□□□□ -0.51
SMAD9-204ENST00000483941 PPP1R3EQ9H7J1 279 aa11.85□□□□□ -0.51
SMAD9-204ENST00000483941 SPACA1Q9HBV2 294 aa11.85□□□□□ -0.51
SMAD9-204ENST00000483941 ZSCAN5BA6NJL1 495 aa11.84□□□□□ -0.51
SMAD9-204ENST00000483941 LRRC30A6NM36 301 aa11.84□□□□□ -0.51
SMAD9-204ENST00000483941 H0YL77 283 aa11.84□□□□□ -0.51
SMAD9-204ENST00000483941 CDIPTO14735 213 aa11.84□□□□□ -0.51
SMAD9-204ENST00000483941 SIAH2O43255 324 aa11.84□□□□□ -0.51
SMAD9-204ENST00000483941 ANGPTL7O43827 346 aa11.84□□□□□ -0.51
SMAD9-204ENST00000483941 IGHV1-46P01743 117 aa11.84□□□□□ -0.51
SMAD9-204ENST00000483941 IRF2P14316 349 aa11.84□□□□□ -0.51
SMAD9-204ENST00000483941 FOSL1P15407 271 aa11.84□□□□□ -0.51
SMAD9-204ENST00000483941 CDK2P24941 298 aa11.84□□□□□ -0.51
SMAD9-204ENST00000483941 FGF12P61328 243 aa11.84□□□□□ -0.51
SMAD9-204ENST00000483941 MAB21L1Q13394 359 aa11.84□□□□□ -0.51
SMAD9-204ENST00000483941 UNC119Q13432 240 aa11.84□□□□□ -0.51
SMAD9-204ENST00000483941 DCTN2Q13561 401 aaKnown RBP11.84□□□□□ -0.51
SMAD9-204ENST00000483941 TMEM255AQ5JRV8 349 aa11.84□□□□□ -0.51
SMAD9-204ENST00000483941 HACD4Q5VWC8 232 aa11.84□□□□□ -0.51
SMAD9-204ENST00000483941 CRIP3Q6Q6R5 217 aa11.84□□□□□ -0.51
SMAD9-204ENST00000483941 C1QL2Q7Z5L3 287 aa11.84□□□□□ -0.51
SMAD9-204ENST00000483941 FAM89BQ8N5H3 189 aa11.84□□□□□ -0.51
SMAD9-204ENST00000483941 OR4M1Q8NGD0 313 aa11.84□□□□□ -0.51
SMAD9-204ENST00000483941 SLAMF9Q96A28 289 aa11.84□□□□□ -0.51
SMAD9-204ENST00000483941 MEGF10Q96KG7 1140 aa11.84□□□□□ -0.51
SMAD9-204ENST00000483941 OR2V2Q96R30 315 aa11.84□□□□□ -0.51
SMAD9-204ENST00000483941 CBLN4Q9NTU7 201 aa11.84□□□□□ -0.51
SMAD9-204ENST00000483941 MYEF2Q9P2K5 600 aaKnown RBP11.84□□□□□ -0.51
SMAD9-204ENST00000483941 MRPS7Q9Y2R9 242 aaKnown RBP11.84□□□□□ -0.51
SMAD9-204ENST00000483941 hCG_1807616A0A1W2PRN6 198 aa11.83□□□□□ -0.52
SMAD9-204ENST00000483941 SULT1C2O00338 296 aa11.83□□□□□ -0.52
SMAD9-204ENST00000483941 PLAUP00749 431 aa11.83□□□□□ -0.52
SMAD9-204ENST00000483941 GSTP1P09211 210 aaKnown RBP11.83□□□□□ -0.52
SMAD9-204ENST00000483941 PGA5P0DJD9 388 aa11.83□□□□□ -0.52
SMAD9-204ENST00000483941 INPP1P49441 399 aa11.83□□□□□ -0.52
SMAD9-204ENST00000483941 PPOXP50336 477 aa11.83□□□□□ -0.52
SMAD9-204ENST00000483941 IL13RA2Q14627 380 aa11.83□□□□□ -0.52
SMAD9-204ENST00000483941 SWI5Q1ZZU3 235 aa11.83□□□□□ -0.52
SMAD9-204ENST00000483941 ZNF181Q2M3W8 571 aa11.83□□□□□ -0.52
SMAD9-204ENST00000483941 MPV17LQ2QL34 196 aa11.83□□□□□ -0.52
SMAD9-204ENST00000483941 SPIN3Q5JUX0 258 aa11.83□□□□□ -0.52
SMAD9-204ENST00000483941 OR10K2Q6IF99 312 aa11.83□□□□□ -0.52
SMAD9-204ENST00000483941 FAM90A1Q86YD7 464 aa11.83□□□□□ -0.52
SMAD9-204ENST00000483941 C1orf87Q8N0U7 546 aa11.83□□□□□ -0.52
SMAD9-204ENST00000483941 FAM58AQ8N1B3 248 aa11.83□□□□□ -0.52
SMAD9-204ENST00000483941 POC1AQ8NBT0 407 aa11.83□□□□□ -0.52
SMAD9-204ENST00000483941 OR10R2Q8NGX6 335 aa11.83□□□□□ -0.52
SMAD9-204ENST00000483941 LILRB1Q8NHL6 650 aaPredicted RBP11.83□□□□□ -0.52
SMAD9-204ENST00000483941 RAB3CQ96E17 227 aa11.83□□□□□ -0.52
SMAD9-204ENST00000483941 Q96M66 194 aa11.83□□□□□ -0.52
SMAD9-204ENST00000483941 NEDD4LQ96PU5 975 aa11.83□□□□□ -0.52
SMAD9-204ENST00000483941 HS3ST6Q96QI5 342 aa11.83□□□□□ -0.52
SMAD9-204ENST00000483941 GAL3ST1Q99999 423 aa11.83□□□□□ -0.52
SMAD9-204ENST00000483941 FGF23Q9GZV9 251 aaPredicted RBP11.83□□□□□ -0.52
SMAD9-204ENST00000483941 RAB1BQ9H0U4 201 aa11.83□□□□□ -0.52
SMAD9-204ENST00000483941 LPAR5Q9H1C0 372 aa11.83□□□□□ -0.52
SMAD9-204ENST00000483941 BANF2Q9H503 90 aa11.83□□□□□ -0.52
SMAD9-204ENST00000483941 SCPEP1Q9HB40 452 aa11.83□□□□□ -0.52
SMAD9-204ENST00000483941 MTCH1Q9NZJ7 389 aa11.83□□□□□ -0.52
SMAD9-204ENST00000483941 ST3GAL6Q9Y274 331 aa11.83□□□□□ -0.52
SMAD9-204ENST00000483941 NPTNQ9Y639 398 aa11.83□□□□□ -0.52
SMAD9-204ENST00000483941 V9GYH0 126 aa11.83□□□□□ -0.52
SMAD9-204ENST00000483941 JMJD1CQ15652 2540 aa11.83□□□□□ -0.52
SMAD9-204ENST00000483941 TRAV18A0A075B6X5 111 aa11.82□□□□□ -0.52
SMAD9-204ENST00000483941 IGKV1-12A0A0C4DH73 117 aa11.82□□□□□ -0.52
SMAD9-204ENST00000483941 NXPH2O95156 264 aa11.82□□□□□ -0.52
SMAD9-204ENST00000483941 IGKV1D-12P01611 117 aa11.82□□□□□ -0.52
SMAD9-204ENST00000483941 GLAP06280 429 aa11.82□□□□□ -0.52
SMAD9-204ENST00000483941 BCL3P20749 454 aa11.82□□□□□ -0.52
SMAD9-204ENST00000483941 VEGFCP49767 419 aa11.82□□□□□ -0.52
SMAD9-204ENST00000483941 EFNB2P52799 333 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms