RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 SPACA5Q96QH8 159 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 MAP1LC3BQ9GZQ8 125 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 TCRBV5S1A1TA0A578 114 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 GLI4P10075 376 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 ZNF816Q0VGE8 651 aaPredicted RBP8.55□□□□□ -1.04
VEGFA-212ENST00000480614 NAA60Q9H7X0 242 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 PHOX2AO14813 284 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 LGALS7P47929 136 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 TMEM241Q24JQ0 296 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 VWA1Q6PCB0 445 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 SFTPA2Q8IWL1 248 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 SFTPA1Q8IWL2 248 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 MFRPQ9BY79 579 aa8.55□□□□□ -1.04
VEGFA-212ENST00000480614 CXCL13O43927 109 aa8.54□□□□□ -1.04
VEGFA-212ENST00000480614 TMEM108Q6UXF1 575 aa8.54□□□□□ -1.04
VEGFA-212ENST00000480614 ZNF66Q6ZN08 573 aa8.54□□□□□ -1.04
VEGFA-212ENST00000480614 C8orf44Q96CB5 159 aa8.54□□□□□ -1.04
VEGFA-212ENST00000480614 PIK3IP1Q96FE7 263 aa8.54□□□□□ -1.04
VEGFA-212ENST00000480614 NHSL1Q5SYE7 1610 aa8.54□□□□□ -1.04
VEGFA-212ENST00000480614 DUXBA0A1W2PPF3 345 aa8.54□□□□□ -1.04
VEGFA-212ENST00000480614 PNRC1Q12796 327 aaPredicted RBP8.54□□□□□ -1.04
VEGFA-212ENST00000480614 Q3ZCU0 254 aa8.54□□□□□ -1.04
VEGFA-212ENST00000480614 ACSM6Q6P461 480 aa8.54□□□□□ -1.04
VEGFA-212ENST00000480614 SLC16A12Q6ZSM3 486 aa8.54□□□□□ -1.04
VEGFA-212ENST00000480614 PPIHO43447 177 aaKnown RBP8.54□□□□□ -1.04
VEGFA-212ENST00000480614 SLC25A5P05141 298 aaKnown RBP8.54□□□□□ -1.04
VEGFA-212ENST00000480614 PDPNQ86YL7 162 aa8.54□□□□□ -1.04
VEGFA-212ENST00000480614 BLNKQ8WV28 456 aa8.54□□□□□ -1.04
VEGFA-212ENST00000480614 MBPP02686 304 aaPredicted RBP8.54□□□□□ -1.04
VEGFA-212ENST00000480614 CD82P27701 267 aa8.54□□□□□ -1.04
VEGFA-212ENST00000480614 MIDNQ504T8 468 aa8.54□□□□□ -1.04
VEGFA-212ENST00000480614 BATF2Q8N1L9 274 aa8.54□□□□□ -1.04
VEGFA-212ENST00000480614 OR4C3Q8NH37 302 aa8.54□□□□□ -1.04
VEGFA-212ENST00000480614 DIRC2Q96SL1 478 aa8.54□□□□□ -1.04
VEGFA-212ENST00000480614 TRAV20A0A0B4J274 112 aa8.54□□□□□ -1.04
VEGFA-212ENST00000480614 IGSF23A1L1A6 192 aa8.54□□□□□ -1.04
VEGFA-212ENST00000480614 CDX4O14627 284 aaPredicted RBP8.54□□□□□ -1.04
VEGFA-212ENST00000480614 HOXC4P09017 264 aaPredicted RBP8.54□□□□□ -1.04
VEGFA-212ENST00000480614 LINC00596Q86U02 117 aa8.54□□□□□ -1.04
VEGFA-212ENST00000480614 OR11G2Q8NGC1 345 aa8.54□□□□□ -1.04
VEGFA-212ENST00000480614 PRSS3P2Q8NHM4 247 aa8.54□□□□□ -1.04
VEGFA-212ENST00000480614 OR10C1Q96KK4 312 aa8.54□□□□□ -1.04
VEGFA-212ENST00000480614 BET1LQ9NYM9 111 aa8.54□□□□□ -1.04
VEGFA-212ENST00000480614 MTCH2Q9Y6C9 303 aa8.54□□□□□ -1.04
VEGFA-212ENST00000480614 ZNF737O75373 536 aa8.54□□□□□ -1.04
VEGFA-212ENST00000480614 LILRA3Q8N6C8 439 aaPredicted RBP8.54□□□□□ -1.04
VEGFA-212ENST00000480614 CCL7P80098 99 aa8.54□□□□□ -1.04
VEGFA-212ENST00000480614 Q6ZNB5 142 aa8.54□□□□□ -1.04
VEGFA-212ENST00000480614 PRRX2Q99811 253 aa8.54□□□□□ -1.04
VEGFA-212ENST00000480614 UFC1Q9Y3C8 167 aa8.54□□□□□ -1.04
VEGFA-212ENST00000480614 TRAV38-1A0A0B4J264 116 aa8.54□□□□□ -1.04
VEGFA-212ENST00000480614 RPL34P49207 117 aaKnown RBP8.54□□□□□ -1.04
VEGFA-212ENST00000480614 GUK1Q16774 197 aa8.54□□□□□ -1.04
VEGFA-212ENST00000480614 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.54□□□□□ -1.04
VEGFA-212ENST00000480614 RAB1CQ92928 201 aa8.54□□□□□ -1.04
VEGFA-212ENST00000480614 BCL3P20749 454 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 ID4P47928 161 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 IL13RA2Q14627 380 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 HCSTQ9UBK5 93 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 K7ESF4 209 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 CD200P41217 278 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 ZNF707Q96C28 371 aaPredicted RBP8.53□□□□□ -1.04
VEGFA-212ENST00000480614 FOXB1Q99853 325 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 RASL12Q9NYN1 266 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 MASP2O00187 686 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 PMCHP20382 165 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 LSM11P83369 360 aaKnown RBP eCLIP8.53□□□□□ -1.048e-18■■□□□ 11.6
VEGFA-212ENST00000480614 RIGQ13278 110 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 CEBPEQ15744 281 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 Q7L0L9 218 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 SLC26A1Q9H2B4 701 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 SLC25A37Q9NYZ2 338 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 WSB1Q9Y6I7 421 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 GSTZ1O43708 216 aaPredicted RBP8.53□□□□□ -1.04
VEGFA-212ENST00000480614 NDUFB6O95139 128 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 CA5BP1Q8WTZ4 195 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 WDR89Q96FK6 387 aaPredicted RBP8.53□□□□□ -1.04
VEGFA-212ENST00000480614 MBNL1Q9NR56 388 aaKnown RBP8.53□□□□□ -1.04
VEGFA-212ENST00000480614 LCTP09848 1927 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 M0QZK8 103 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 GGCTO75223 188 aaKnown RBP8.53□□□□□ -1.04
VEGFA-212ENST00000480614 RPS4Y1P22090 263 aaKnown RBP8.53□□□□□ -1.04
VEGFA-212ENST00000480614 IL24Q13007 206 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 SURF2Q15527 256 aaPredicted RBP8.53□□□□□ -1.04
VEGFA-212ENST00000480614 KHDC3LQ587J8 217 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 OR5AL1P0C617 328 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 RIMKLAQ8IXN7 391 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 COPS9Q8WXC6 57 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 SLC7A10Q9NS82 523 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 ALG1L2C9J202 215 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 ADAM20O43506 726 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 ELOBQ15370 118 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 ETFDHQ16134 617 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 ZNF260Q3ZCT1 412 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 TMEM240Q5SV17 173 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 PAQR6Q6TCH4 344 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 WDR31Q8NA23 367 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 UBALD1Q8TB05 177 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 P4HTMQ9NXG6 502 aa8.53□□□□□ -1.04
VEGFA-212ENST00000480614 MMP24Q9Y5R2 645 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 402.2 ms