RNA–Protein interactions for RNA: ENST00000478063.2

LMNA-214, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 285 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-214ENST00000478063 TREM2Q9NZC2 230 aa11.25□□□□□ -0.61
LMNA-214ENST00000478063 ST3GAL6Q9Y274 331 aa11.25□□□□□ -0.61
LMNA-214ENST00000478063 MRPS7Q9Y2R9 242 aaKnown RBP11.25□□□□□ -0.61
LMNA-214ENST00000478063 V9GYH0 126 aa11.25□□□□□ -0.61
LMNA-214ENST00000478063 A0A0A6YYD4 124 aa11.24□□□□□ -0.61
LMNA-214ENST00000478063 A0A0G2JMP0 313 aa11.24□□□□□ -0.61
LMNA-214ENST00000478063 A0A0X1KG70 313 aa11.24□□□□□ -0.61
LMNA-214ENST00000478063 WNT9BO14905 357 aa11.24□□□□□ -0.61
LMNA-214ENST00000478063 NOS1APO75052 506 aaPredicted RBP11.24□□□□□ -0.61
LMNA-214ENST00000478063 ACAA1P09110 424 aaPredicted RBP11.24□□□□□ -0.61
LMNA-214ENST00000478063 IRF2P14316 349 aa11.24□□□□□ -0.61
LMNA-214ENST00000478063 GLRA1P23415 457 aa11.24□□□□□ -0.61
LMNA-214ENST00000478063 RBMXP38159 391 aaKnown RBP11.24□□□□□ -0.61
LMNA-214ENST00000478063 PMELP40967 661 aa11.24□□□□□ -0.61
LMNA-214ENST00000478063 TAS2R20P59543 309 aa11.24□□□□□ -0.61
LMNA-214ENST00000478063 ERVK11-1P61568 191 aa11.24□□□□□ -0.61
LMNA-214ENST00000478063 ZNF45Q02386 682 aa11.24□□□□□ -0.61
LMNA-214ENST00000478063 TAF9Q16594 264 aa11.24□□□□□ -0.61
LMNA-214ENST00000478063 MOGAT2Q3SYC2 334 aa11.24□□□□□ -0.61
LMNA-214ENST00000478063 RAB12Q6IQ22 244 aa11.24□□□□□ -0.61
LMNA-214ENST00000478063 FIP1L1Q6UN15 594 aaKnown RBP11.24□□□□□ -0.61
LMNA-214ENST00000478063 CHST4Q8NCG5 386 aa11.24□□□□□ -0.61
LMNA-214ENST00000478063 Q8NFD4 153 aa11.24□□□□□ -0.61
LMNA-214ENST00000478063 OR4M2Q8NGB6 313 aa11.24□□□□□ -0.61
LMNA-214ENST00000478063 OR56B1Q8NGI3 324 aa11.24□□□□□ -0.61
LMNA-214ENST00000478063 HPS1Q92902 700 aa11.24□□□□□ -0.61
LMNA-214ENST00000478063 RAB1BQ9H0U4 201 aa11.24□□□□□ -0.61
LMNA-214ENST00000478063 RHOFQ9HBH0 211 aa11.24□□□□□ -0.61
LMNA-214ENST00000478063 RNF7Q9UBF6 113 aa11.24□□□□□ -0.61
LMNA-214ENST00000478063 IL36RNQ9UBH0 155 aa11.24□□□□□ -0.61
LMNA-214ENST00000478063 HELZ2Q9BYK8 2649 aaKnown RBP11.23□□□□□ -0.61
LMNA-214ENST00000478063 AKAP6Q13023 2319 aa11.23□□□□□ -0.61
LMNA-214ENST00000478063 TRAV18A0A075B6X5 111 aa11.23□□□□□ -0.61
LMNA-214ENST00000478063 A0A0A6YYH2 397 aa11.23□□□□□ -0.61
LMNA-214ENST00000478063 A6NJ64 397 aa11.23□□□□□ -0.61
LMNA-214ENST00000478063 J3QRK9 145 aa11.23□□□□□ -0.61
LMNA-214ENST00000478063 GEMIN2O14893 280 aaKnown RBP11.23□□□□□ -0.61
LMNA-214ENST00000478063 SOCS1O15524 211 aa11.23□□□□□ -0.61
LMNA-214ENST00000478063 XRCC3O43542 346 aa11.23□□□□□ -0.61
LMNA-214ENST00000478063 HPXP02790 462 aa11.23□□□□□ -0.61
LMNA-214ENST00000478063 CHRM2P08172 466 aa11.23□□□□□ -0.61
LMNA-214ENST00000478063 EGR1P18146 543 aa11.23□□□□□ -0.61
LMNA-214ENST00000478063 DUSP1P28562 367 aa11.23□□□□□ -0.61
LMNA-214ENST00000478063 BLVRBP30043 206 aaPredicted RBP11.23□□□□□ -0.61
LMNA-214ENST00000478063 NR4A2P43354 598 aa11.23□□□□□ -0.61
LMNA-214ENST00000478063 HOXA4Q00056 320 aaPredicted RBP11.23□□□□□ -0.61
LMNA-214ENST00000478063 PDCD1Q15116 288 aa11.23□□□□□ -0.61
LMNA-214ENST00000478063 ZNF79Q15937 498 aa11.23□□□□□ -0.61
LMNA-214ENST00000478063 PYDC2Q56P42 97 aa11.23□□□□□ -0.61
LMNA-214ENST00000478063 C20orf204Q6ZNR8 217 aa11.23□□□□□ -0.61
LMNA-214ENST00000478063 FAM89BQ8N5H3 189 aa11.23□□□□□ -0.61
LMNA-214ENST00000478063 GCSAMQ8N6F7 178 aa11.23□□□□□ -0.61
LMNA-214ENST00000478063 OR10R2Q8NGX6 335 aa11.23□□□□□ -0.61
LMNA-214ENST00000478063 Q8TCH9 128 aa11.23□□□□□ -0.61
LMNA-214ENST00000478063 WDR13Q9H1Z4 485 aa11.23□□□□□ -0.61
LMNA-214ENST00000478063 PLEKHF2Q9H8W4 249 aa11.23□□□□□ -0.61
LMNA-214ENST00000478063 USP9YO00507 2555 aaPredicted RBP11.23□□□□□ -0.61
LMNA-214ENST00000478063 LRRC30A6NM36 301 aa11.22□□□□□ -0.61
LMNA-214ENST00000478063 SRRM5B3KS81 715 aa11.22□□□□□ -0.61
LMNA-214ENST00000478063 RAB27BO00194 218 aa11.22□□□□□ -0.61
LMNA-214ENST00000478063 OR7C1O76099 320 aaPredicted RBP11.22□□□□□ -0.61
LMNA-214ENST00000478063 CYB5R3P00387 301 aaPredicted RBP11.22□□□□□ -0.61
LMNA-214ENST00000478063 PTBP1P26599 531 aaKnown RBP eCLIP11.22□□□□□ -0.61
LMNA-214ENST00000478063 CD80P33681 288 aa11.22□□□□□ -0.61
LMNA-214ENST00000478063 CFHR2P36980 270 aa11.22□□□□□ -0.61
LMNA-214ENST00000478063 CDKN1AP38936 164 aa11.22□□□□□ -0.61
LMNA-214ENST00000478063 PITPNAQ00169 270 aa11.22□□□□□ -0.61
LMNA-214ENST00000478063 IKZF1Q13422 519 aa11.22□□□□□ -0.61
LMNA-214ENST00000478063 IL13RA2Q14627 380 aa11.22□□□□□ -0.61
LMNA-214ENST00000478063 SMIM21Q3B7S5 101 aa11.22□□□□□ -0.61
LMNA-214ENST00000478063 NHLRC3Q5JS37 347 aa11.22□□□□□ -0.61
LMNA-214ENST00000478063 NKAPLQ5M9Q1 402 aa11.22□□□□□ -0.61
LMNA-214ENST00000478063 PYHIN1Q6K0P9 492 aa11.22□□□□□ -0.61
LMNA-214ENST00000478063 ACP7Q6ZNF0 438 aa11.22□□□□□ -0.61
LMNA-214ENST00000478063 LINC00596Q86U02 117 aa11.22□□□□□ -0.61
LMNA-214ENST00000478063 TGIF2LYQ8IUE0 185 aa11.22□□□□□ -0.61
LMNA-214ENST00000478063 SNX29P2Q8IUI4 249 aa11.22□□□□□ -0.61
LMNA-214ENST00000478063 ZNF295-AS1Q8N0V1 137 aa11.22□□□□□ -0.61
LMNA-214ENST00000478063 RAB3CQ96E17 227 aa11.22□□□□□ -0.61
LMNA-214ENST00000478063 COL12A1Q99715 3063 aa11.22□□□□□ -0.61
LMNA-214ENST00000478063 SOSTQ9BQB4 213 aa11.22□□□□□ -0.61
LMNA-214ENST00000478063 SRRQ9GZT4 340 aa11.22□□□□□ -0.61
LMNA-214ENST00000478063 HES4Q9HCC6 221 aa11.22□□□□□ -0.61
LMNA-214ENST00000478063 RASL12Q9NYN1 266 aa11.22□□□□□ -0.61
LMNA-214ENST00000478063 RABL2AQ9UBK7 228 aaPredicted RBP11.22□□□□□ -0.61
LMNA-214ENST00000478063 DNAJB11Q9UBS4 358 aa11.22□□□□□ -0.61
LMNA-214ENST00000478063 OR14J1Q9UGF5 321 aa11.22□□□□□ -0.61
LMNA-214ENST00000478063 RABL2BQ9UNT1 228 aa11.22□□□□□ -0.61
LMNA-214ENST00000478063 CACNG2Q9Y698 323 aa11.22□□□□□ -0.61
LMNA-214ENST00000478063 USF3Q68DE3 2245 aa11.21□□□□□ -0.61
LMNA-214ENST00000478063 DSCAML1Q8TD84 2053 aa11.21□□□□□ -0.61
LMNA-214ENST00000478063 IGHV1-69-2A0A0G2JMI3 117 aa11.21□□□□□ -0.61
LMNA-214ENST00000478063 H7C417 338 aa11.21□□□□□ -0.61
LMNA-214ENST00000478063 CD40LGP29965 261 aa11.21□□□□□ -0.61
LMNA-214ENST00000478063 MNDAP41218 407 aa11.21□□□□□ -0.61
LMNA-214ENST00000478063 PTH2RP49190 550 aa11.21□□□□□ -0.61
LMNA-214ENST00000478063 SCN1BQ07699 218 aa11.21□□□□□ -0.61
LMNA-214ENST00000478063 MPV17LQ2QL34 196 aa11.21□□□□□ -0.61
LMNA-214ENST00000478063 RNASE12Q5GAN4 147 aaKnown RBP11.21□□□□□ -0.61
LMNA-214ENST00000478063 SPIN3Q5JUX0 258 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms