RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-222	ENST00000477937	CYB5A	P00167	134 aa		11.29	□□□□□ -0.6
HDAC7-222	ENST00000477937	CHRM2	P08172	466 aa		11.29	□□□□□ -0.6
HDAC7-222	ENST00000477937	RPSA	P08865	295 aa	Known RBP	11.29	□□□□□ -0.6
HDAC7-222	ENST00000477937	OCM2	P0CE71	109 aa		11.29	□□□□□ -0.6
HDAC7-222	ENST00000477937	OCM	P0CE72	109 aa	Predicted RBP	11.29	□□□□□ -0.6
HDAC7-222	ENST00000477937	ATF1	P18846	271 aa		11.29	□□□□□ -0.6
HDAC7-222	ENST00000477937	PRKACB	P22694	351 aa		11.29	□□□□□ -0.6
HDAC7-222	ENST00000477937	SAA4	P35542	130 aa		11.29	□□□□□ -0.6
HDAC7-222	ENST00000477937	RAG2	P55895	527 aa		11.29	□□□□□ -0.6
HDAC7-222	ENST00000477937	MTCP1	P56278	107 aa		11.29	□□□□□ -0.6
HDAC7-222	ENST00000477937	RAB40B	Q12829	278 aa		11.29	□□□□□ -0.6
HDAC7-222	ENST00000477937	ALKBH1	Q13686	389 aa	Known RBP	11.29	□□□□□ -0.6
HDAC7-222	ENST00000477937	KLHL22	Q53GT1	634 aa		11.29	□□□□□ -0.6
HDAC7-222	ENST00000477937	TMEM200B	Q69YZ2	307 aa		11.29	□□□□□ -0.6
HDAC7-222	ENST00000477937	GDPGP1	Q6ZNW5	385 aa		11.29	□□□□□ -0.6
HDAC7-222	ENST00000477937	UTS2B	Q765I0	119 aa		11.29	□□□□□ -0.6
HDAC7-222	ENST00000477937	MKX	Q8IYA7	352 aa		11.29	□□□□□ -0.6
HDAC7-222	ENST00000477937		Q8IYB0	196 aa		11.29	□□□□□ -0.6
HDAC7-222	ENST00000477937	ZNF676	Q8N7Q3	588 aa		11.29	□□□□□ -0.6
HDAC7-222	ENST00000477937	ASCC1	Q8N9N2	400 aa	Known RBP	11.29	□□□□□ -0.6
HDAC7-222	ENST00000477937	ZNF555	Q8NEP9	628 aa		11.29	□□□□□ -0.6
HDAC7-222	ENST00000477937	OR4M1	Q8NGD0	313 aa		11.29	□□□□□ -0.6
HDAC7-222	ENST00000477937	SLITRK2	Q9H156	845 aa		11.29	□□□□□ -0.6
HDAC7-222	ENST00000477937	HEXA-AS1	Q9H8Q6	139 aa		11.29	□□□□□ -0.6
HDAC7-222	ENST00000477937	AMBN	Q9NP70	447 aa		11.29	□□□□□ -0.6
HDAC7-222	ENST00000477937	INPP5E	Q9NRR6	644 aa		11.29	□□□□□ -0.6
HDAC7-222	ENST00000477937	C1RL	Q9NZP8	487 aa		11.29	□□□□□ -0.6
HDAC7-222	ENST00000477937	ZNRD1	Q9P1U0	126 aa		11.29	□□□□□ -0.6
HDAC7-222	ENST00000477937	RPL36	Q9Y3U8	105 aa	Known RBP	11.29	□□□□□ -0.6
HDAC7-222	ENST00000477937	IGKV1-9	A0A0C4DH69	117 aa		11.28	□□□□□ -0.6
HDAC7-222	ENST00000477937		F8VVB4	439 aa		11.28	□□□□□ -0.6
HDAC7-222	ENST00000477937		F8VWA3	439 aa		11.28	□□□□□ -0.6
HDAC7-222	ENST00000477937	ANGPTL7	O43827	346 aa		11.28	□□□□□ -0.6
HDAC7-222	ENST00000477937	IGHA1	P01876	353 aa		11.28	□□□□□ -0.6
HDAC7-222	ENST00000477937	AZGP1	P25311	298 aa	Known RBP	11.28	□□□□□ -0.6
HDAC7-222	ENST00000477937	COL10A1	Q03692	680 aa		11.28	□□□□□ -0.6
HDAC7-222	ENST00000477937	ZSCAN26	Q16670	478 aa		11.28	□□□□□ -0.6
HDAC7-222	ENST00000477937	LHFPL2	Q6ZUX7	228 aa		11.28	□□□□□ -0.6
HDAC7-222	ENST00000477937	SYS1	Q8N2H4	156 aa		11.28	□□□□□ -0.6
HDAC7-222	ENST00000477937	PNKD	Q8N490	385 aa		11.28	□□□□□ -0.6
HDAC7-222	ENST00000477937	OR13C3	Q8NGS6	347 aa		11.28	□□□□□ -0.6
HDAC7-222	ENST00000477937	SPSB1	Q96BD6	273 aa		11.28	□□□□□ -0.6
HDAC7-222	ENST00000477937	ERVK13-1	Q9NX77	482 aa		11.28	□□□□□ -0.6
HDAC7-222	ENST00000477937	SMPD3	Q9NY59	655 aa	Predicted RBP	11.28	□□□□□ -0.6
HDAC7-222	ENST00000477937	MYRF	Q9Y2G1	1151 aa		11.28	□□□□□ -0.6
HDAC7-222	ENST00000477937	OR4C45	A6NMZ5	311 aa		11.27	□□□□□ -0.61
HDAC7-222	ENST00000477937	SPRY1	O43609	319 aa	Predicted RBP	11.27	□□□□□ -0.61
HDAC7-222	ENST00000477937	PIP	P12273	146 aa	Predicted RBP	11.27	□□□□□ -0.61
HDAC7-222	ENST00000477937	POU3F4	P49335	361 aa		11.27	□□□□□ -0.61
HDAC7-222	ENST00000477937	ERVFRD-1	P60508	538 aa		11.27	□□□□□ -0.61
HDAC7-222	ENST00000477937	RELB	Q01201	579 aa		11.27	□□□□□ -0.61
HDAC7-222	ENST00000477937	MRPL28	Q13084	256 aa	Known RBP	11.27	□□□□□ -0.61
HDAC7-222	ENST00000477937	MIDN	Q504T8	468 aa		11.27	□□□□□ -0.61
HDAC7-222	ENST00000477937	LPCAT4	Q643R3	524 aa		11.27	□□□□□ -0.61
HDAC7-222	ENST00000477937	OLFML2A	Q68BL7	652 aa		11.27	□□□□□ -0.61
HDAC7-222	ENST00000477937	HCP5	Q6MZN7	132 aa		11.27	□□□□□ -0.61
HDAC7-222	ENST00000477937	GDPD3	Q7L5L3	318 aa		11.27	□□□□□ -0.61
HDAC7-222	ENST00000477937	FAM58A	Q8N1B3	248 aa		11.27	□□□□□ -0.61
HDAC7-222	ENST00000477937	OR51A4	Q8NGJ6	313 aa		11.27	□□□□□ -0.61
HDAC7-222	ENST00000477937	OR52I1	Q8NGK6	324 aa		11.27	□□□□□ -0.61
HDAC7-222	ENST00000477937	OR5R1	Q8NH85	324 aa		11.27	□□□□□ -0.61
HDAC7-222	ENST00000477937	EMG1	Q92979	244 aa	Known RBP	11.27	□□□□□ -0.61
HDAC7-222	ENST00000477937	SNX22	Q96L94	193 aa		11.27	□□□□□ -0.61
HDAC7-222	ENST00000477937	RDH12	Q96NR8	316 aa		11.27	□□□□□ -0.61
HDAC7-222	ENST00000477937	OPALIN	Q96PE5	141 aa		11.27	□□□□□ -0.61
HDAC7-222	ENST00000477937	ISG20L2	Q9H9L3	353 aa	Known RBP	11.27	□□□□□ -0.61
HDAC7-222	ENST00000477937	SEBOX	Q9HB31	216 aa	Predicted RBP	11.27	□□□□□ -0.61
HDAC7-222	ENST00000477937	NEK6	Q9HC98	313 aa		11.27	□□□□□ -0.61
HDAC7-222	ENST00000477937	MRPS18A	Q9NVS2	196 aa	Known RBP	11.27	□□□□□ -0.61
HDAC7-222	ENST00000477937	CLPSL1	A2RUU4	121 aa		11.26	□□□□□ -0.61
HDAC7-222	ENST00000477937	TMEM212	A6NML5	194 aa		11.26	□□□□□ -0.61
HDAC7-222	ENST00000477937	ZNF737	O75373	536 aa		11.26	□□□□□ -0.61
HDAC7-222	ENST00000477937	CCL3L1	P16619	93 aa		11.26	□□□□□ -0.61
HDAC7-222	ENST00000477937	GBX2	P52951	348 aa	Predicted RBP	11.26	□□□□□ -0.61
HDAC7-222	ENST00000477937	EDDM3B	P56851	147 aa		11.26	□□□□□ -0.61
HDAC7-222	ENST00000477937	PDZK1IP1	Q13113	114 aa		11.26	□□□□□ -0.61
HDAC7-222	ENST00000477937	ZNF273	Q14593	569 aa		11.26	□□□□□ -0.61
HDAC7-222	ENST00000477937	TAF9	Q16594	264 aa		11.26	□□□□□ -0.61
HDAC7-222	ENST00000477937	C17orf107	Q6ZR85	190 aa		11.26	□□□□□ -0.61
HDAC7-222	ENST00000477937	OR8H2	Q8N162	312 aa		11.26	□□□□□ -0.61
HDAC7-222	ENST00000477937	C11orf42	Q8N5U0	333 aa		11.26	□□□□□ -0.61
HDAC7-222	ENST00000477937	BEND2	Q8NDZ0	799 aa		11.26	□□□□□ -0.61
HDAC7-222	ENST00000477937	OR10AC1	Q8NH08	325 aa		11.26	□□□□□ -0.61
HDAC7-222	ENST00000477937	HAVCR2	Q8TDQ0	301 aa		11.26	□□□□□ -0.61
HDAC7-222	ENST00000477937	COMMD4	Q9H0A8	199 aa		11.26	□□□□□ -0.61
HDAC7-222	ENST00000477937	ZCCHC4	Q9H5U6	513 aa		11.26	□□□□□ -0.61
HDAC7-222	ENST00000477937	ZNF696	Q9H7X3	374 aa		11.26	□□□□□ -0.61
HDAC7-222	ENST00000477937	GLS2	Q9UI32	602 aa		11.26	□□□□□ -0.61
HDAC7-222	ENST00000477937	VPREB3	Q9UKI3	123 aa		11.26	□□□□□ -0.61
HDAC7-222	ENST00000477937	TRBV2	A0A0J9YWF9	115 aa		11.25	□□□□□ -0.61
HDAC7-222	ENST00000477937	ZFPL1	O95159	310 aa		11.25	□□□□□ -0.61
HDAC7-222	ENST00000477937	HAND1	O96004	215 aa		11.25	□□□□□ -0.61
HDAC7-222	ENST00000477937	MT-ND2	P03891	347 aa		11.25	□□□□□ -0.61
HDAC7-222	ENST00000477937	CCDC159	P0C7I6	412 aa		11.25	□□□□□ -0.61
HDAC7-222	ENST00000477937	PRKACA	P17612	351 aa		11.25	□□□□□ -0.61
HDAC7-222	ENST00000477937	BCL3	P20749	454 aa		11.25	□□□□□ -0.61
HDAC7-222	ENST00000477937	PEX2	P28328	305 aa		11.25	□□□□□ -0.61
HDAC7-222	ENST00000477937	NPBWR2	P48146	333 aa		11.25	□□□□□ -0.61
HDAC7-222	ENST00000477937	LGALS4	P56470	323 aa		11.25	□□□□□ -0.61
HDAC7-222	ENST00000477937	ZNF146	Q15072	292 aa		11.25	□□□□□ -0.61

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