RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 SUCNR1Q9BXA5 334 aa10.25□□□□□ -0.77
CLCNKA-205ENST00000477360 WDR13Q9H1Z4 485 aa10.25□□□□□ -0.77
CLCNKA-205ENST00000477360 ZCCHC4Q9H5U6 513 aa10.25□□□□□ -0.77
CLCNKA-205ENST00000477360 VCX3AQ9NNX9 186 aa10.25□□□□□ -0.77
CLCNKA-205ENST00000477360 RPUSD1Q9UJJ7 312 aaKnown RBP10.25□□□□□ -0.77
CLCNKA-205ENST00000477360 NUP50Q9UKX7 468 aa10.25□□□□□ -0.77
CLCNKA-205ENST00000477360 IGKV1D-17A0A075B6S4 117 aa10.24□□□□□ -0.77
CLCNKA-205ENST00000477360 IGKV1-9A0A0C4DH69 117 aa10.24□□□□□ -0.77
CLCNKA-205ENST00000477360 SC5DO75845 299 aa10.24□□□□□ -0.77
CLCNKA-205ENST00000477360 NXPH2O95156 264 aa10.24□□□□□ -0.77
CLCNKA-205ENST00000477360 GALP22466 123 aa10.24□□□□□ -0.77
CLCNKA-205ENST00000477360 AZGP1P25311 298 aaKnown RBP10.24□□□□□ -0.77
CLCNKA-205ENST00000477360 BMXP51813 675 aa10.24□□□□□ -0.77
CLCNKA-205ENST00000477360 MTCP1P56278 107 aa10.24□□□□□ -0.77
CLCNKA-205ENST00000477360 RPS11P62280 158 aaKnown RBP eCLIP10.24□□□□□ -0.77
CLCNKA-205ENST00000477360 PDCD1Q15116 288 aa10.24□□□□□ -0.77
CLCNKA-205ENST00000477360 ARMCX4Q5H9R4 360 aa10.24□□□□□ -0.77
CLCNKA-205ENST00000477360 METAP1DQ6UB28 335 aaPredicted RBP10.24□□□□□ -0.77
CLCNKA-205ENST00000477360 BTN2A1Q7KYR7 527 aa10.24□□□□□ -0.77
CLCNKA-205ENST00000477360 CALHM1Q8IU99 346 aa10.24□□□□□ -0.77
CLCNKA-205ENST00000477360 PHC2Q8IXK0 858 aa10.24□□□□□ -0.77
CLCNKA-205ENST00000477360 CMTM4Q8IZR5 234 aa10.24□□□□□ -0.77
CLCNKA-205ENST00000477360 C19orf18Q8NEA5 215 aa10.24□□□□□ -0.77
CLCNKA-205ENST00000477360 CEP19Q96LK0 163 aa10.24□□□□□ -0.77
CLCNKA-205ENST00000477360 DCTN5Q9BTE1 182 aa10.24□□□□□ -0.77
CLCNKA-205ENST00000477360 MRPS26Q9BYN8 205 aaKnown RBP10.24□□□□□ -0.77
CLCNKA-205ENST00000477360 CNTD2Q9H8S5 307 aa10.24□□□□□ -0.77
CLCNKA-205ENST00000477360 UNKLQ9H9P5 680 aaKnown RBP10.24□□□□□ -0.77
CLCNKA-205ENST00000477360 SMURF1Q9HCE7 757 aa10.24□□□□□ -0.77
CLCNKA-205ENST00000477360 DHDHQ9UQ10 334 aa10.24□□□□□ -0.77
CLCNKA-205ENST00000477360 SF3B6Q9Y3B4 125 aaKnown RBP10.24□□□□□ -0.77
CLCNKA-205ENST00000477360 IGHV3OR15-7A0A075B7D8 119 aa10.23□□□□□ -0.77
CLCNKA-205ENST00000477360 FAM230AA0A1W2PPH8 454 aa10.23□□□□□ -0.77
CLCNKA-205ENST00000477360 CCRL2O00421 344 aa10.23□□□□□ -0.77
CLCNKA-205ENST00000477360 SULT1B1O43704 296 aa10.23□□□□□ -0.77
CLCNKA-205ENST00000477360 SYNGR1O43759 233 aa10.23□□□□□ -0.77
CLCNKA-205ENST00000477360 GPX5O75715 221 aa10.23□□□□□ -0.77
CLCNKA-205ENST00000477360 PLATP00750 562 aa10.23□□□□□ -0.77
CLCNKA-205ENST00000477360 ALDOBP05062 364 aa10.23□□□□□ -0.77
CLCNKA-205ENST00000477360 MMP9P14780 707 aa10.23□□□□□ -0.77
CLCNKA-205ENST00000477360 GABRA5P31644 462 aa10.23□□□□□ -0.77
CLCNKA-205ENST00000477360 PRDX2P32119 198 aa10.23□□□□□ -0.77
CLCNKA-205ENST00000477360 RBMXP38159 391 aaKnown RBP10.23□□□□□ -0.77
CLCNKA-205ENST00000477360 PDZK1IP1Q13113 114 aa10.23□□□□□ -0.77
CLCNKA-205ENST00000477360 SSX1Q16384 188 aa10.23□□□□□ -0.77
CLCNKA-205ENST00000477360 Q499Y3 187 aa10.23□□□□□ -0.77
CLCNKA-205ENST00000477360 SPIN3Q5JUX0 258 aa10.23□□□□□ -0.77
CLCNKA-205ENST00000477360 CD200R1LQ6Q8B3 271 aa10.23□□□□□ -0.77
CLCNKA-205ENST00000477360 FIP1L1Q6UN15 594 aaKnown RBP10.23□□□□□ -0.77
CLCNKA-205ENST00000477360 UNQ9370/PRO34162Q6UXP9 181 aa10.23□□□□□ -0.77
CLCNKA-205ENST00000477360 IL17RELQ6ZVW7 336 aa10.23□□□□□ -0.77
CLCNKA-205ENST00000477360 ZFP41Q8N8Y5 198 aa10.23□□□□□ -0.77
CLCNKA-205ENST00000477360 OR51A4Q8NGJ6 313 aa10.23□□□□□ -0.77
CLCNKA-205ENST00000477360 OR10AC1Q8NH08 325 aa10.23□□□□□ -0.77
CLCNKA-205ENST00000477360 PHYHIPQ92561 330 aa10.23□□□□□ -0.77
CLCNKA-205ENST00000477360 GAFA1Q96PS6 74 aa10.23□□□□□ -0.77
CLCNKA-205ENST00000477360 ZMAT3Q9HA38 289 aaKnown RBP10.23□□□□□ -0.77
CLCNKA-205ENST00000477360 NDUFB11Q9NX14 153 aa10.23□□□□□ -0.77
CLCNKA-205ENST00000477360 SLC25A10Q9UBX3 287 aaPredicted RBP10.23□□□□□ -0.77
CLCNKA-205ENST00000477360 IGKV1-27A0A075B6S5 117 aa10.22□□□□□ -0.77
CLCNKA-205ENST00000477360 A0A1W2PPH5 198 aa10.22□□□□□ -0.77
CLCNKA-205ENST00000477360 M0R1W7 72 aa10.22□□□□□ -0.77
CLCNKA-205ENST00000477360 FCN3O75636 299 aa10.22□□□□□ -0.77
CLCNKA-205ENST00000477360 INMTO95050 263 aa10.22□□□□□ -0.77
CLCNKA-205ENST00000477360 CHRM2P08172 466 aa10.22□□□□□ -0.77
CLCNKA-205ENST00000477360 OCM2P0CE71 109 aa10.22□□□□□ -0.77
CLCNKA-205ENST00000477360 OCMP0CE72 109 aaPredicted RBP10.22□□□□□ -0.77
CLCNKA-205ENST00000477360 HSMCR30P0CW71 290 aa10.22□□□□□ -0.77
CLCNKA-205ENST00000477360 MAPK3P27361 379 aaPredicted RBP10.22□□□□□ -0.77
CLCNKA-205ENST00000477360 GP2P55259 537 aaKnown RBP10.22□□□□□ -0.77
CLCNKA-205ENST00000477360 HILS1P60008 231 aa10.22□□□□□ -0.77
CLCNKA-205ENST00000477360 ZNF146Q15072 292 aa10.22□□□□□ -0.77
CLCNKA-205ENST00000477360 DGUOKQ16854 277 aa10.22□□□□□ -0.77
CLCNKA-205ENST00000477360 METTL11BQ5VVY1 283 aa10.22□□□□□ -0.77
CLCNKA-205ENST00000477360 LIPKQ5VXJ0 399 aa10.22□□□□□ -0.77
CLCNKA-205ENST00000477360 SLC25A26Q70HW3 274 aa10.22□□□□□ -0.77
CLCNKA-205ENST00000477360 CDH26Q8IXH8 852 aa10.22□□□□□ -0.77
CLCNKA-205ENST00000477360 FAM216BQ8N7L0 139 aa10.22□□□□□ -0.77
CLCNKA-205ENST00000477360 SPATA3Q8NHX4 192 aa10.22□□□□□ -0.77
CLCNKA-205ENST00000477360 NPRL2Q8WTW4 380 aa10.22□□□□□ -0.77
CLCNKA-205ENST00000477360 ST8SIA4Q92187 359 aa10.22□□□□□ -0.77
CLCNKA-205ENST00000477360 WDFY2Q96P53 400 aa10.22□□□□□ -0.77
CLCNKA-205ENST00000477360 PRDM13Q9H4Q3 707 aa10.22□□□□□ -0.77
CLCNKA-205ENST00000477360 MTCH1Q9NZJ7 389 aa10.22□□□□□ -0.77
CLCNKA-205ENST00000477360 MAB21L2Q9Y586 359 aa10.22□□□□□ -0.77
CLCNKA-205ENST00000477360 DOCK11Q5JSL3 2073 aa10.22□□□□□ -0.77
CLCNKA-205ENST00000477360 TRBV5-7A0A0A0MS05 114 aa10.21□□□□□ -0.77
CLCNKA-205ENST00000477360 A6NIN4 97 aa10.21□□□□□ -0.77
CLCNKA-205ENST00000477360 RFPL4AA6NLU0 287 aa10.21□□□□□ -0.77
CLCNKA-205ENST00000477360 RFPL4AL1F8VTS6 287 aa10.21□□□□□ -0.77
CLCNKA-205ENST00000477360 CLDN34H7C241 214 aa10.21□□□□□ -0.77
CLCNKA-205ENST00000477360 K7N7A8 449 aa10.21□□□□□ -0.77
CLCNKA-205ENST00000477360 MAGEB3O15480 346 aa10.21□□□□□ -0.77
CLCNKA-205ENST00000477360 KDM4BO94953 1096 aa10.21□□□□□ -0.77
CLCNKA-205ENST00000477360 TFAP2AP05549 437 aa10.21□□□□□ -0.77
CLCNKA-205ENST00000477360 FSTP19883 344 aa10.21□□□□□ -0.77
CLCNKA-205ENST00000477360 RAB3AP20336 220 aa10.21□□□□□ -0.77
CLCNKA-205ENST00000477360 PSMB9P28065 219 aa10.21□□□□□ -0.77
CLCNKA-205ENST00000477360 ALDH3B2P48448 385 aa10.21□□□□□ -0.77
CLCNKA-205ENST00000477360 FGF12P61328 243 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms