RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-231	ENST00000477334	TSPOAP1	O95153	1857 aa		2.24	□□□□□ -2.05
RBM39-231	ENST00000477334	ZNF608	Q9ULD9	1512 aa	Predicted RBP	2.24	□□□□□ -2.05
RBM39-231	ENST00000477334	IGKV1-8	A0A0C4DH67	115 aa		2.24	□□□□□ -2.05
RBM39-231	ENST00000477334	GOLGA6L10	A6NI86	522 aa		2.24	□□□□□ -2.05
RBM39-231	ENST00000477334	NDUFC2-KCTD14	E9PQ53	114 aa		2.24	□□□□□ -2.05
RBM39-231	ENST00000477334	PRAMEF26	H0Y7S4	382 aa		2.24	□□□□□ -2.05
RBM39-231	ENST00000477334		M0QXV9	152 aa		2.24	□□□□□ -2.05
RBM39-231	ENST00000477334	CHST10	O43529	356 aa		2.24	□□□□□ -2.05
RBM39-231	ENST00000477334	SLC22A5	O76082	557 aa		2.24	□□□□□ -2.05
RBM39-231	ENST00000477334	CD8A	P01732	235 aa		2.24	□□□□□ -2.05
RBM39-231	ENST00000477334	HLA-DQB1	P01920	261 aa		2.24	□□□□□ -2.05
RBM39-231	ENST00000477334	ZNF688	P0C7X2	276 aa		2.24	□□□□□ -2.05
RBM39-231	ENST00000477334	PVALB	P20472	110 aa	Predicted RBP	2.24	□□□□□ -2.05
RBM39-231	ENST00000477334	RHOA	P61586	193 aa		2.24	□□□□□ -2.05
RBM39-231	ENST00000477334	CRADD	P78560	199 aa		2.24	□□□□□ -2.05
RBM39-231	ENST00000477334	INCA1	Q0VD86	236 aa		2.24	□□□□□ -2.05
RBM39-231	ENST00000477334	ZNHIT3	Q15649	155 aa	Predicted RBP	2.24	□□□□□ -2.05
RBM39-231	ENST00000477334	TOMM34	Q15785	309 aa	Predicted RBP	2.24	□□□□□ -2.05
RBM39-231	ENST00000477334	TMEM249	Q2WGJ8	235 aa		2.24	□□□□□ -2.05
RBM39-231	ENST00000477334	CDNF	Q49AH0	187 aa		2.24	□□□□□ -2.05
RBM39-231	ENST00000477334	KPRP	Q5T749	579 aa	Predicted RBP	2.24	□□□□□ -2.05
RBM39-231	ENST00000477334	STEAP4	Q687X5	459 aa		2.24	□□□□□ -2.05
RBM39-231	ENST00000477334	OPN5	Q6U736	354 aa		2.24	□□□□□ -2.05
RBM39-231	ENST00000477334	USP50	Q70EL3	339 aa	Predicted RBP	2.24	□□□□□ -2.05
RBM39-231	ENST00000477334	TMEM256	Q8N2U0	113 aa		2.24	□□□□□ -2.05
RBM39-231	ENST00000477334	OR4K17	Q8NGC6	315 aa		2.24	□□□□□ -2.05
RBM39-231	ENST00000477334	OR13G1	Q8NGZ3	307 aa		2.24	□□□□□ -2.05
RBM39-231	ENST00000477334	RORB	Q92753	470 aa		2.24	□□□□□ -2.05
RBM39-231	ENST00000477334	SLC25A46	Q96AG3	418 aa		2.24	□□□□□ -2.05
RBM39-231	ENST00000477334	MRPL48	Q96GC5	212 aa	Known RBP	2.24	□□□□□ -2.05
RBM39-231	ENST00000477334	SNF8	Q96H20	258 aa		2.24	□□□□□ -2.05
RBM39-231	ENST00000477334	APOL4	Q9BPW4	351 aa		2.24	□□□□□ -2.05
RBM39-231	ENST00000477334	TBL1Y	Q9BQ87	522 aa		2.24	□□□□□ -2.05
RBM39-231	ENST00000477334	TMEM243	Q9BU79	118 aa		2.24	□□□□□ -2.05
RBM39-231	ENST00000477334	NXF2	Q9GZY0	626 aa	Known RBP	2.24	□□□□□ -2.05
RBM39-231	ENST00000477334	HEBP1	Q9NRV9	189 aa		2.24	□□□□□ -2.05
RBM39-231	ENST00000477334	DNAJC27	Q9NZQ0	273 aa		2.24	□□□□□ -2.05
RBM39-231	ENST00000477334	ENOPH1	Q9UHY7	261 aa		2.24	□□□□□ -2.05
RBM39-231	ENST00000477334	VAX2	Q9UIW0	290 aa		2.24	□□□□□ -2.05
RBM39-231	ENST00000477334	SCML1	Q9UN30	329 aa		2.24	□□□□□ -2.05
RBM39-231	ENST00000477334	TFR2	Q9UP52	801 aa		2.24	□□□□□ -2.05
RBM39-231	ENST00000477334	SNX24	Q9Y343	169 aa		2.24	□□□□□ -2.05
RBM39-231	ENST00000477334		S4R3C0	116 aa		2.24	□□□□□ -2.05
RBM39-231	ENST00000477334	KIAA0232	Q92628	1395 aa		2.23	□□□□□ -2.05
RBM39-231	ENST00000477334		A8MUU9	505 aa		2.23	□□□□□ -2.05
RBM39-231	ENST00000477334		C9J4A7	227 aa		2.23	□□□□□ -2.05
RBM39-231	ENST00000477334	TAAR5	O14804	337 aa		2.23	□□□□□ -2.05
RBM39-231	ENST00000477334	PSPHP1	O15172	72 aa		2.23	□□□□□ -2.05
RBM39-231	ENST00000477334	TOX3	O15405	576 aa	Predicted RBP	2.23	□□□□□ -2.05
RBM39-231	ENST00000477334	FABP7	O15540	132 aa		2.23	□□□□□ -2.05
RBM39-231	ENST00000477334	NDUFS5	O43920	106 aa		2.23	□□□□□ -2.05
RBM39-231	ENST00000477334	EIF1B	O60739	113 aa	Known RBP	2.23	□□□□□ -2.05
RBM39-231	ENST00000477334	CDRT1	O95170	752 aa		2.23	□□□□□ -2.05
RBM39-231	ENST00000477334	KLHL2	O95198	593 aa		2.23	□□□□□ -2.05
RBM39-231	ENST00000477334	CD74	P04233	296 aa		2.23	□□□□□ -2.05
RBM39-231	ENST00000477334	GP1BA	P07359	652 aa		2.23	□□□□□ -2.05
RBM39-231	ENST00000477334	KRT7	P08729	469 aa		2.23	□□□□□ -2.05
RBM39-231	ENST00000477334	NEFH	P12036	1026 aa		2.23	□□□□□ -2.05
RBM39-231	ENST00000477334	HLA-G	P17693	338 aa		2.23	□□□□□ -2.05
RBM39-231	ENST00000477334	CD70	P32970	193 aa		2.23	□□□□□ -2.05
RBM39-231	ENST00000477334	EIF1	P41567	113 aa	Known RBP	2.23	□□□□□ -2.05
RBM39-231	ENST00000477334	CD164	Q04900	197 aa		2.23	□□□□□ -2.05
RBM39-231	ENST00000477334	ZNF616	Q08AN1	781 aa		2.23	□□□□□ -2.05
RBM39-231	ENST00000477334	OR10J3	Q5JRS4	329 aa		2.23	□□□□□ -2.05
RBM39-231	ENST00000477334	PRR9	Q5T870	116 aa		2.23	□□□□□ -2.05
RBM39-231	ENST00000477334	FAM151B	Q6UXP7	276 aa		2.23	□□□□□ -2.05
RBM39-231	ENST00000477334	FAM19A1	Q7Z5A9	133 aa		2.23	□□□□□ -2.05
RBM39-231	ENST00000477334	C10orf107	Q8IVU9	208 aa		2.23	□□□□□ -2.05
RBM39-231	ENST00000477334	LRRC52	Q8N7C0	313 aa		2.23	□□□□□ -2.05
RBM39-231	ENST00000477334	OR1J4	Q8NGS1	313 aa		2.23	□□□□□ -2.05
RBM39-231	ENST00000477334	OR9A2	Q8NGT5	310 aa		2.23	□□□□□ -2.05
RBM39-231	ENST00000477334	RNASEH2C	Q8TDP1	164 aa	Known RBP	2.23	□□□□□ -2.05
RBM39-231	ENST00000477334	BLNK	Q8WV28	456 aa		2.23	□□□□□ -2.05
RBM39-231	ENST00000477334	C22orf15	Q8WYQ4	148 aa		2.23	□□□□□ -2.05
RBM39-231	ENST00000477334	ZMYND19	Q96E35	227 aa	Predicted RBP	2.23	□□□□□ -2.05
RBM39-231	ENST00000477334	RILP	Q96NA2	401 aa		2.23	□□□□□ -2.05
RBM39-231	ENST00000477334	PITX2	Q99697	317 aa		2.23	□□□□□ -2.05
RBM39-231	ENST00000477334	ZNF426	Q9BUY5	554 aa		2.23	□□□□□ -2.05
RBM39-231	ENST00000477334	SHCBP1L	Q9BZQ2	653 aa		2.23	□□□□□ -2.05
RBM39-231	ENST00000477334	WDR54	Q9H977	334 aa		2.23	□□□□□ -2.05
RBM39-231	ENST00000477334	C8orf17	Q9NRJ1	99 aa		2.23	□□□□□ -2.05
RBM39-231	ENST00000477334	SDHAF3	Q9NRP4	125 aa		2.23	□□□□□ -2.05
RBM39-231	ENST00000477334	USE1	Q9NZ43	259 aa		2.23	□□□□□ -2.05
RBM39-231	ENST00000477334	COMMD9	Q9P000	198 aa		2.23	□□□□□ -2.05
RBM39-231	ENST00000477334	ENPP4	Q9Y6X5	453 aa		2.23	□□□□□ -2.05
RBM39-231	ENST00000477334	FABP12	A6NFH5	140 aa		2.22	□□□□□ -2.05
RBM39-231	ENST00000477334	SMIM23	A6NLE4	172 aa		2.22	□□□□□ -2.05
RBM39-231	ENST00000477334		M0R1X1	148 aa		2.22	□□□□□ -2.05
RBM39-231	ENST00000477334	BRI3	O95415	125 aa		2.22	□□□□□ -2.05
RBM39-231	ENST00000477334	ATP6V1G2	O95670	118 aa		2.22	□□□□□ -2.05
RBM39-231	ENST00000477334	TRBV12-3	P01733	135 aa		2.22	□□□□□ -2.05
RBM39-231	ENST00000477334	OCM2	P0CE71	109 aa		2.22	□□□□□ -2.05
RBM39-231	ENST00000477334	IL1RN	P18510	177 aa		2.22	□□□□□ -2.05
RBM39-231	ENST00000477334	ME2	P23368	584 aa		2.22	□□□□□ -2.05
RBM39-231	ENST00000477334	F8A1	P23610	371 aa		2.22	□□□□□ -2.05
RBM39-231	ENST00000477334	CXCR1	P25024	350 aa		2.22	□□□□□ -2.05
RBM39-231	ENST00000477334	PSMB5	P28074	263 aa		2.22	□□□□□ -2.05
RBM39-231	ENST00000477334	GTF2H1	P32780	548 aa		2.22	□□□□□ -2.05
RBM39-231	ENST00000477334	POLR2I	P36954	125 aa	Known RBP	2.22	□□□□□ -2.05
RBM39-231	ENST00000477334	CCL23	P55773	120 aa		2.22	□□□□□ -2.05

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