RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 LSM2Q9Y333 95 aaKnown RBP8.04□□□□□ -1.12
HDAC3-208ENST00000476739 MAB21L2Q9Y586 359 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 NF1P21359 2839 aa8.04□□□□□ -1.12
HDAC3-208ENST00000476739 IGKV1-12A0A0C4DH73 117 aa8.03□□□□□ -1.12
HDAC3-208ENST00000476739 RFPL4AA6NLU0 287 aa8.03□□□□□ -1.12
HDAC3-208ENST00000476739 RFPL4AL1F8VTS6 287 aa8.03□□□□□ -1.12
HDAC3-208ENST00000476739 SPRY1O43609 319 aaPredicted RBP8.03□□□□□ -1.12
HDAC3-208ENST00000476739 NOS1APO75052 506 aaPredicted RBP8.03□□□□□ -1.12
HDAC3-208ENST00000476739 IGKV1D-12P01611 117 aa8.03□□□□□ -1.12
HDAC3-208ENST00000476739 MT-ND2P03891 347 aa8.03□□□□□ -1.12
HDAC3-208ENST00000476739 ACAA1P09110 424 aaPredicted RBP8.03□□□□□ -1.12
HDAC3-208ENST00000476739 GSTT2P0CG29 244 aa8.03□□□□□ -1.12
HDAC3-208ENST00000476739 GSTT2BP0CG30 244 aa8.03□□□□□ -1.12
HDAC3-208ENST00000476739 BCL3P20749 454 aa8.03□□□□□ -1.12
HDAC3-208ENST00000476739 GATA3P23771 443 aa8.03□□□□□ -1.12
HDAC3-208ENST00000476739 GABRA2P47869 451 aa8.03□□□□□ -1.12
HDAC3-208ENST00000476739 NPBWR2P48146 333 aa8.03□□□□□ -1.12
HDAC3-208ENST00000476739 POU3F4P49335 361 aa8.03□□□□□ -1.12
HDAC3-208ENST00000476739 RBP2P50120 134 aa8.03□□□□□ -1.12
HDAC3-208ENST00000476739 NPY4RP50391 375 aa8.03□□□□□ -1.12
HDAC3-208ENST00000476739 ATP1B3P54709 279 aa8.03□□□□□ -1.12
HDAC3-208ENST00000476739 MTCP1P56278 107 aa8.03□□□□□ -1.12
HDAC3-208ENST00000476739 SRSF2Q01130 221 aaKnown RBP8.03□□□□□ -1.12
HDAC3-208ENST00000476739 PAX8Q06710 450 aa8.03□□□□□ -1.12
HDAC3-208ENST00000476739 ZNF529Q6P280 563 aa8.03□□□□□ -1.12
HDAC3-208ENST00000476739 BTN2A1Q7KYR7 527 aa8.03□□□□□ -1.12
HDAC3-208ENST00000476739 SERPINA12Q8IW75 414 aa8.03□□□□□ -1.12
HDAC3-208ENST00000476739 ZNRF1Q8ND25 227 aa8.03□□□□□ -1.12
HDAC3-208ENST00000476739 DNAAF1Q8NEP3 725 aa8.03□□□□□ -1.12
HDAC3-208ENST00000476739 OR5D18Q8NGL1 313 aa8.03□□□□□ -1.12
HDAC3-208ENST00000476739 GPR148Q8TDV2 347 aa8.03□□□□□ -1.12
HDAC3-208ENST00000476739 RAB40AQ8WXH6 277 aa8.03□□□□□ -1.12
HDAC3-208ENST00000476739 ST8SIA4Q92187 359 aa8.03□□□□□ -1.12
HDAC3-208ENST00000476739 MYDGFQ969H8 173 aa8.03□□□□□ -1.12
HDAC3-208ENST00000476739 NUDT16L1Q9BRJ7 211 aaKnown RBP8.03□□□□□ -1.12
HDAC3-208ENST00000476739 RASL12Q9NYN1 266 aa8.03□□□□□ -1.12
HDAC3-208ENST00000476739 IL36RNQ9UBH0 155 aa8.03□□□□□ -1.12
HDAC3-208ENST00000476739 ERGIC3Q9Y282 383 aa8.03□□□□□ -1.12
HDAC3-208ENST00000476739 POLDIP2Q9Y2S7 368 aa8.03□□□□□ -1.12
HDAC3-208ENST00000476739 ZNF281Q9Y2X9 895 aa8.03□□□□□ -1.12
HDAC3-208ENST00000476739 TPRKBQ9Y3C4 175 aa8.03□□□□□ -1.12
HDAC3-208ENST00000476739 TRBV5-5A0A0J9YX44 114 aa8.02□□□□□ -1.13
HDAC3-208ENST00000476739 KIR2DS1A0A191URI9 304 aa8.02□□□□□ -1.13
HDAC3-208ENST00000476739 A0A1W2PPK0 400 aa8.02□□□□□ -1.13
HDAC3-208ENST00000476739 J3QLI3 93 aa8.02□□□□□ -1.13
HDAC3-208ENST00000476739 SIGLEC5O15389 551 aa8.02□□□□□ -1.13
HDAC3-208ENST00000476739 SULT1B1O43704 296 aa8.02□□□□□ -1.13
HDAC3-208ENST00000476739 ANGPTL7O43827 346 aa8.02□□□□□ -1.13
HDAC3-208ENST00000476739 NXPH2O95156 264 aa8.02□□□□□ -1.13
HDAC3-208ENST00000476739 FSHBP01225 129 aa8.02□□□□□ -1.13
HDAC3-208ENST00000476739 SMIM18P0DKX4 95 aa8.02□□□□□ -1.13
HDAC3-208ENST00000476739 CELP19835 753 aa8.02□□□□□ -1.13
HDAC3-208ENST00000476739 M6PRP20645 277 aa8.02□□□□□ -1.13
HDAC3-208ENST00000476739 HNF1AP20823 631 aa8.02□□□□□ -1.13
HDAC3-208ENST00000476739 PCMT1P22061 227 aa8.02□□□□□ -1.13
HDAC3-208ENST00000476739 PRKACBP22694 351 aa8.02□□□□□ -1.13
HDAC3-208ENST00000476739 SRP14P37108 136 aaKnown RBP8.02□□□□□ -1.13
HDAC3-208ENST00000476739 MAP2K4P45985 399 aa8.02□□□□□ -1.13
HDAC3-208ENST00000476739 ZP1P60852 638 aa8.02□□□□□ -1.13
HDAC3-208ENST00000476739 PDZK1IP1Q13113 114 aa8.02□□□□□ -1.13
HDAC3-208ENST00000476739 INSL4Q14641 139 aa8.02□□□□□ -1.13
HDAC3-208ENST00000476739 KLF17Q5JT82 389 aaPredicted RBP8.02□□□□□ -1.13
HDAC3-208ENST00000476739 LHFPL2Q6ZUX7 228 aa8.02□□□□□ -1.13
HDAC3-208ENST00000476739 SLC36A1Q7Z2H8 476 aa8.02□□□□□ -1.13
HDAC3-208ENST00000476739 OR52N4Q8NGI2 321 aa8.02□□□□□ -1.13
HDAC3-208ENST00000476739 OR5D14Q8NGL3 314 aa8.02□□□□□ -1.13
HDAC3-208ENST00000476739 TMEM106AQ96A25 262 aa8.02□□□□□ -1.13
HDAC3-208ENST00000476739 SPSB1Q96BD6 273 aa8.02□□□□□ -1.13
HDAC3-208ENST00000476739 MED30Q96HR3 178 aa8.02□□□□□ -1.13
HDAC3-208ENST00000476739 CEP19Q96LK0 163 aa8.02□□□□□ -1.13
HDAC3-208ENST00000476739 OR14A2Q96R54 314 aa8.02□□□□□ -1.13
HDAC3-208ENST00000476739 MND1Q9BWT6 205 aa8.02□□□□□ -1.13
HDAC3-208ENST00000476739 ELL3Q9HB65 397 aaPredicted RBP8.02□□□□□ -1.13
HDAC3-208ENST00000476739 DIABLOQ9NR28 239 aa8.02□□□□□ -1.13
HDAC3-208ENST00000476739 RBFOX1Q9NWB1 397 aaKnown RBP8.02□□□□□ -1.13
HDAC3-208ENST00000476739 OR14J1Q9UGF5 321 aa8.02□□□□□ -1.13
HDAC3-208ENST00000476739 AUP1Q9Y679 476 aa8.02□□□□□ -1.13
HDAC3-208ENST00000476739 CEPT1Q9Y6K0 416 aa8.02□□□□□ -1.13
HDAC3-208ENST00000476739 NIPBLQ6KC79 2804 aaeCLIP8.02□□□□□ -1.13
HDAC3-208ENST00000476739 TRAV8-7A0A075B6U6 113 aa8.01□□□□□ -1.13
HDAC3-208ENST00000476739 IGHV3OR16-10A0A075B7F0 116 aa8.01□□□□□ -1.13
HDAC3-208ENST00000476739 NKX6-3A6NJ46 265 aa8.01□□□□□ -1.13
HDAC3-208ENST00000476739 PIN1P1O15428 100 aa8.01□□□□□ -1.13
HDAC3-208ENST00000476739 RGS10O43665 173 aa8.01□□□□□ -1.13
HDAC3-208ENST00000476739 NDUFB3O43676 98 aa8.01□□□□□ -1.13
HDAC3-208ENST00000476739 NOL3O60936 208 aaKnown RBP8.01□□□□□ -1.13
HDAC3-208ENST00000476739 RGS9O75916 674 aaPredicted RBP8.01□□□□□ -1.13
HDAC3-208ENST00000476739 ALX3O95076 343 aa8.01□□□□□ -1.13
HDAC3-208ENST00000476739 SFTPBP07988 381 aa8.01□□□□□ -1.13
HDAC3-208ENST00000476739 HCKP08631 526 aa8.01□□□□□ -1.13
HDAC3-208ENST00000476739 IGFBP3P17936 291 aaPredicted RBP8.01□□□□□ -1.13
HDAC3-208ENST00000476739 RAB3AP20336 220 aa8.01□□□□□ -1.13
HDAC3-208ENST00000476739 PRDX2P32119 198 aa8.01□□□□□ -1.13
HDAC3-208ENST00000476739 ALDH3B2P48448 385 aa8.01□□□□□ -1.13
HDAC3-208ENST00000476739 EIF2B2P49770 351 aaKnown RBP8.01□□□□□ -1.13
HDAC3-208ENST00000476739 SNU13P55769 128 aaKnown RBP8.01□□□□□ -1.13
HDAC3-208ENST00000476739 TAS2R43P59537 309 aa8.01□□□□□ -1.13
HDAC3-208ENST00000476739 FGF12P61328 243 aa8.01□□□□□ -1.13
HDAC3-208ENST00000476739 IL13RA1P78552 427 aa8.01□□□□□ -1.13
HDAC3-208ENST00000476739 ACSM1Q08AH1 577 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms