RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 DAOAP59103 153 aa1.38□□□□□ -2.19
ECHDC1-213ENST00000474240 LCN2P80188 198 aa1.38□□□□□ -2.19
ECHDC1-213ENST00000474240 BNIP2Q12982 314 aa1.38□□□□□ -2.19
ECHDC1-213ENST00000474240 PIP5KL1Q5T9C9 394 aa1.38□□□□□ -2.19
ECHDC1-213ENST00000474240 DUPD1Q68J44 220 aa1.38□□□□□ -2.19
ECHDC1-213ENST00000474240 CLEC18BQ6UXF7 455 aa1.38□□□□□ -2.19
ECHDC1-213ENST00000474240 CLEC19AQ6UXS0 136 aa1.38□□□□□ -2.19
ECHDC1-213ENST00000474240 VTCN1Q7Z7D3 282 aa1.38□□□□□ -2.19
ECHDC1-213ENST00000474240 AMN1Q8IY45 258 aa1.38□□□□□ -2.19
ECHDC1-213ENST00000474240 PDCL2Q8N4E4 241 aa1.38□□□□□ -2.19
ECHDC1-213ENST00000474240 CCNYL1Q8N7R7 359 aa1.38□□□□□ -2.19
ECHDC1-213ENST00000474240 ZNF738Q8NE65 137 aa1.38□□□□□ -2.19
ECHDC1-213ENST00000474240 OR4K13Q8NH42 304 aa1.38□□□□□ -2.19
ECHDC1-213ENST00000474240 NT5CQ8TCD5 201 aa1.38□□□□□ -2.19
ECHDC1-213ENST00000474240 C2orf15Q8WU43 125 aaKnown RBP1.38□□□□□ -2.19
ECHDC1-213ENST00000474240 C22orf15Q8WYQ4 148 aa1.38□□□□□ -2.19
ECHDC1-213ENST00000474240 OR8D1Q8WZ84 308 aa1.38□□□□□ -2.19
ECHDC1-213ENST00000474240 ZNF75AQ96N20 296 aa1.38□□□□□ -2.19
ECHDC1-213ENST00000474240 GABRG3Q99928 467 aa1.38□□□□□ -2.19
ECHDC1-213ENST00000474240 COA1Q9GZY4 146 aa1.38□□□□□ -2.19
ECHDC1-213ENST00000474240 NCOR1P1Q9H4R4 102 aa1.38□□□□□ -2.19
ECHDC1-213ENST00000474240 RGCCQ9H4X1 137 aa1.38□□□□□ -2.19
ECHDC1-213ENST00000474240 LRRC19Q9H756 370 aa1.38□□□□□ -2.19
ECHDC1-213ENST00000474240 C8orf33Q9H7E9 229 aaPredicted RBP1.38□□□□□ -2.19
ECHDC1-213ENST00000474240 ICOSQ9Y6W8 199 aa1.38□□□□□ -2.19
ECHDC1-213ENST00000474240 SDK2Q58EX2 2172 aa1.38□□□□□ -2.19
ECHDC1-213ENST00000474240 BAZ1BQ9UIG0 1483 aaKnown RBP1.37□□□□□ -2.19
ECHDC1-213ENST00000474240 A0A1B0GTQ1 180 aa1.37□□□□□ -2.19
ECHDC1-213ENST00000474240 FAM240AA0A1B0GVK7 77 aa1.37□□□□□ -2.19
ECHDC1-213ENST00000474240 NCF1BA6NI72 391 aaPredicted RBP1.37□□□□□ -2.19
ECHDC1-213ENST00000474240 CD300LBA8K4G0 201 aa1.37□□□□□ -2.19
ECHDC1-213ENST00000474240 NCF1CA8MVU1 366 aaPredicted RBP1.37□□□□□ -2.19
ECHDC1-213ENST00000474240 RNF113AO15541 343 aaKnown RBP1.37□□□□□ -2.19
ECHDC1-213ENST00000474240 CDS2O95674 445 aa1.37□□□□□ -2.19
ECHDC1-213ENST00000474240 IMPA1P29218 277 aa1.37□□□□□ -2.19
ECHDC1-213ENST00000474240 IL12BP29460 328 aa1.37□□□□□ -2.19
ECHDC1-213ENST00000474240 PEX19P40855 299 aa1.37□□□□□ -2.19
ECHDC1-213ENST00000474240 DSTNP60981 165 aa1.37□□□□□ -2.19
ECHDC1-213ENST00000474240 SSX1Q16384 188 aa1.37□□□□□ -2.19
ECHDC1-213ENST00000474240 LYZL2Q7Z4W2 148 aa1.37□□□□□ -2.19
ECHDC1-213ENST00000474240 CYP4Z1Q86W10 505 aa1.37□□□□□ -2.19
ECHDC1-213ENST00000474240 ZCCHC24Q8N2G6 241 aaKnown RBP1.37□□□□□ -2.19
ECHDC1-213ENST00000474240 ARHGAP18Q8N392 663 aa1.37□□□□□ -2.19
ECHDC1-213ENST00000474240 ZNF555Q8NEP9 628 aa1.37□□□□□ -2.19
ECHDC1-213ENST00000474240 OR8K1Q8NGG5 319 aa1.37□□□□□ -2.19
ECHDC1-213ENST00000474240 UBA3Q8TBC4 463 aa1.37□□□□□ -2.19
ECHDC1-213ENST00000474240 TCP10LQ8TDR4 215 aa1.37□□□□□ -2.19
ECHDC1-213ENST00000474240 OR5P3Q8WZ94 311 aa1.37□□□□□ -2.19
ECHDC1-213ENST00000474240 SLC25A44Q96H78 314 aaPredicted RBP1.37□□□□□ -2.19
ECHDC1-213ENST00000474240 PYURFQ96I23 114 aa1.37□□□□□ -2.19
ECHDC1-213ENST00000474240 ANAPC13Q9BS18 74 aa1.37□□□□□ -2.19
ECHDC1-213ENST00000474240 BCL2L14Q9BZR8 327 aa1.37□□□□□ -2.19
ECHDC1-213ENST00000474240 C14orf166Q9Y224 244 aaKnown RBP1.37□□□□□ -2.19
ECHDC1-213ENST00000474240 ZSWIM8A7E2V4 1837 aa1.36□□□□□ -2.19
ECHDC1-213ENST00000474240 IGLV10-54A0A075B6I4 117 aa1.36□□□□□ -2.19
ECHDC1-213ENST00000474240 ZNF99A8MXY4 864 aaPredicted RBP1.36□□□□□ -2.19
ECHDC1-213ENST00000474240 GGTLC3B5MD39 225 aa1.36□□□□□ -2.19
ECHDC1-213ENST00000474240 J3QKU1 62 aa1.36□□□□□ -2.19
ECHDC1-213ENST00000474240 ZNF593O00488 134 aaPredicted RBP1.36□□□□□ -2.19
ECHDC1-213ENST00000474240 POP7O75817 140 aaKnown RBP1.36□□□□□ -2.19
ECHDC1-213ENST00000474240 TRAPPC6AO75865 159 aa1.36□□□□□ -2.19
ECHDC1-213ENST00000474240 PLEKHA8P1O95397 391 aa1.36□□□□□ -2.19
ECHDC1-213ENST00000474240 CTSGP08311 255 aa1.36□□□□□ -2.19
ECHDC1-213ENST00000474240 ZNF708P17019 499 aa1.36□□□□□ -2.19
ECHDC1-213ENST00000474240 PRKACAP17612 351 aa1.36□□□□□ -2.19
ECHDC1-213ENST00000474240 CD9P21926 228 aa1.36□□□□□ -2.19
ECHDC1-213ENST00000474240 PAX6P26367 422 aa1.36□□□□□ -2.19
ECHDC1-213ENST00000474240 IVDP26440 423 aa1.36□□□□□ -2.19
ECHDC1-213ENST00000474240 ELK4P28324 431 aa1.36□□□□□ -2.19
ECHDC1-213ENST00000474240 MLF1P58340 268 aa1.36□□□□□ -2.19
ECHDC1-213ENST00000474240 SLC9A3R2Q15599 337 aa1.36□□□□□ -2.19
ECHDC1-213ENST00000474240 TNXAQ16473 311 aa1.36□□□□□ -2.19
ECHDC1-213ENST00000474240 CLEC12AQ5QGZ9 265 aa1.36□□□□□ -2.19
ECHDC1-213ENST00000474240 FAM27D1Q5T7N8 215 aa1.36□□□□□ -2.19
ECHDC1-213ENST00000474240 LINC00596Q86U02 117 aa1.36□□□□□ -2.19
ECHDC1-213ENST00000474240 NELFCDQ8IXH7 590 aa1.36□□□□□ -2.19
ECHDC1-213ENST00000474240 FBXO36Q8NEA4 188 aa1.36□□□□□ -2.19
ECHDC1-213ENST00000474240 NDNFQ8TB73 568 aa1.36□□□□□ -2.19
ECHDC1-213ENST00000474240 AGR3Q8TD06 166 aa1.36□□□□□ -2.19
ECHDC1-213ENST00000474240 CASTOR1Q8WTX7 329 aa1.36□□□□□ -2.19
ECHDC1-213ENST00000474240 FAM131CQ96AQ9 280 aa1.36□□□□□ -2.19
ECHDC1-213ENST00000474240 SPACA5Q96QH8 159 aa1.36□□□□□ -2.19
ECHDC1-213ENST00000474240 SLC38A1Q9H2H9 487 aa1.36□□□□□ -2.19
ECHDC1-213ENST00000474240 KIR3DX1Q9H7L2 352 aa1.36□□□□□ -2.19
ECHDC1-213ENST00000474240 DIABLOQ9NR28 239 aa1.36□□□□□ -2.19
ECHDC1-213ENST00000474240 PSME2Q9UL46 239 aa1.36□□□□□ -2.19
ECHDC1-213ENST00000474240 LOXHD1Q8IVV2 1947 aa1.35□□□□□ -2.19
ECHDC1-213ENST00000474240 IGHV3-21A0A0B4J1V1 117 aa1.35□□□□□ -2.19
ECHDC1-213ENST00000474240 A0A0B4J2C4 111 aa1.35□□□□□ -2.19
ECHDC1-213ENST00000474240 LOC389332A0A1B0GUA5 103 aa1.35□□□□□ -2.19
ECHDC1-213ENST00000474240 K7EPK0 472 aa1.35□□□□□ -2.19
ECHDC1-213ENST00000474240 ETHE1O95571 254 aa1.35□□□□□ -2.19
ECHDC1-213ENST00000474240 MBP02144 154 aa1.35□□□□□ -2.19
ECHDC1-213ENST00000474240 TAC1P20366 129 aa1.35□□□□□ -2.19
ECHDC1-213ENST00000474240 PRTN3P24158 256 aa1.35□□□□□ -2.19
ECHDC1-213ENST00000474240 GNRHRP30968 328 aa1.35□□□□□ -2.19
ECHDC1-213ENST00000474240 ZNF83P51522 516 aa1.35□□□□□ -2.19
ECHDC1-213ENST00000474240 XKP51811 444 aa1.35□□□□□ -2.19
ECHDC1-213ENST00000474240 IFFO1Q0D2I5 559 aa1.35□□□□□ -2.19
ECHDC1-213ENST00000474240 DOC2AQ14183 400 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms