RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 DMKNQ6E0U4 476 aaPredicted RBP15.6■□□□□ 0.09
PTCD3-210ENST00000473829 BRD3OSQ6XYD6 125 aa15.6■□□□□ 0.09
PTCD3-210ENST00000473829 USP43Q70EL4 1123 aa15.6■□□□□ 0.09
PTCD3-210ENST00000473829 STX19Q8N4C7 294 aa15.6■□□□□ 0.09
PTCD3-210ENST00000473829 SIGLECL1Q8N7X8 197 aa15.6■□□□□ 0.09
PTCD3-210ENST00000473829 SGCDQ92629 289 aa15.6■□□□□ 0.09
PTCD3-210ENST00000473829 SMIM19Q96E16 107 aa15.6■□□□□ 0.09
PTCD3-210ENST00000473829 SUCNR1Q9BXA5 334 aa15.6■□□□□ 0.09
PTCD3-210ENST00000473829 CNTD2Q9H8S5 307 aa15.6■□□□□ 0.09
PTCD3-210ENST00000473829 RBFOX1Q9NWB1 397 aaKnown RBP15.6■□□□□ 0.09
PTCD3-210ENST00000473829 PAK1IP1Q9NWT1 392 aaPredicted RBP15.6■□□□□ 0.09
PTCD3-210ENST00000473829 CHCHD3Q9NX63 227 aaKnown RBP15.6■□□□□ 0.09
PTCD3-210ENST00000473829 ONECUT1Q9UBC0 465 aa15.6■□□□□ 0.09
PTCD3-210ENST00000473829 A0A0A6YYJ9 748 aa15.59■□□□□ 0.09
PTCD3-210ENST00000473829 IGKV1-12A0A0C4DH73 117 aa15.59■□□□□ 0.09
PTCD3-210ENST00000473829 SLC1A7O00341 560 aa15.59■□□□□ 0.09
PTCD3-210ENST00000473829 SULT1B1O43704 296 aa15.59■□□□□ 0.09
PTCD3-210ENST00000473829 ANGPTL7O43827 346 aa15.59■□□□□ 0.09
PTCD3-210ENST00000473829 ATP6V1G2O95670 118 aa15.59■□□□□ 0.09
PTCD3-210ENST00000473829 IGKV1D-12P01611 117 aa15.59■□□□□ 0.09
PTCD3-210ENST00000473829 BCL3P20749 454 aa15.59■□□□□ 0.09
PTCD3-210ENST00000473829 FPR2P25090 351 aa15.59■□□□□ 0.09
PTCD3-210ENST00000473829 DLX1P56177 255 aa15.59■□□□□ 0.09
PTCD3-210ENST00000473829 PDZK1IP1Q13113 114 aa15.59■□□□□ 0.09
PTCD3-210ENST00000473829 MED21Q13503 144 aa15.59■□□□□ 0.09
PTCD3-210ENST00000473829 ZNF529Q6P280 563 aa15.59■□□□□ 0.09
PTCD3-210ENST00000473829 IZUMO2Q6UXV1 221 aa15.59■□□□□ 0.09
PTCD3-210ENST00000473829 C9orf139Q6ZV77 190 aa15.59■□□□□ 0.09
PTCD3-210ENST00000473829 SERPINA12Q8IW75 414 aa15.59■□□□□ 0.09
PTCD3-210ENST00000473829 OR51A2Q8NGJ7 313 aa15.59■□□□□ 0.09
PTCD3-210ENST00000473829 OR5D18Q8NGL1 313 aa15.59■□□□□ 0.09
PTCD3-210ENST00000473829 PGLYRP3Q96LB9 341 aa15.59■□□□□ 0.09
PTCD3-210ENST00000473829 C19orf24Q9BVV8 132 aa15.59■□□□□ 0.09
PTCD3-210ENST00000473829 MS4A7Q9GZW8 240 aaPredicted RBP15.59■□□□□ 0.09
PTCD3-210ENST00000473829 TAS2R4Q9NYW5 299 aa15.59■□□□□ 0.09
PTCD3-210ENST00000473829 CENPVL3A0A0U1RRI6 287 aa15.58■□□□□ 0.08
PTCD3-210ENST00000473829 MDFIC2A0A1B0GVS7 189 aa15.58■□□□□ 0.08
PTCD3-210ENST00000473829 RPSAP08865 295 aaKnown RBP15.58■□□□□ 0.08
PTCD3-210ENST00000473829 OCM2P0CE71 109 aa15.58■□□□□ 0.08
PTCD3-210ENST00000473829 OCMP0CE72 109 aaPredicted RBP15.58■□□□□ 0.08
PTCD3-210ENST00000473829 CALCBP10092 127 aa15.58■□□□□ 0.08
PTCD3-210ENST00000473829 MYF6P23409 242 aa15.58■□□□□ 0.08
PTCD3-210ENST00000473829 CAPZA1P52907 286 aa15.58■□□□□ 0.08
PTCD3-210ENST00000473829 PRB3Q04118 309 aaPredicted RBP15.58■□□□□ 0.08
PTCD3-210ENST00000473829 VMO1Q7Z5L0 202 aa15.58■□□□□ 0.08
PTCD3-210ENST00000473829 ZNF561Q8N587 486 aa15.58■□□□□ 0.08
PTCD3-210ENST00000473829 Q8N7P7 452 aa15.58■□□□□ 0.08
PTCD3-210ENST00000473829 ZDHHC22Q8N966 263 aa15.58■□□□□ 0.08
PTCD3-210ENST00000473829 OR5D14Q8NGL3 314 aa15.58■□□□□ 0.08
PTCD3-210ENST00000473829 GPR148Q8TDV2 347 aa15.58■□□□□ 0.08
PTCD3-210ENST00000473829 GHSRQ92847 366 aa15.58■□□□□ 0.08
PTCD3-210ENST00000473829 EMG1Q92979 244 aaKnown RBP15.58■□□□□ 0.08
PTCD3-210ENST00000473829 ORAI1Q96D31 301 aa15.58■□□□□ 0.08
PTCD3-210ENST00000473829 ANKRD60Q9BZ19 345 aa15.58■□□□□ 0.08
PTCD3-210ENST00000473829 C19orf12Q9NSK7 152 aa15.58■□□□□ 0.08
PTCD3-210ENST00000473829 KPTNQ9Y664 436 aa15.58■□□□□ 0.08
PTCD3-210ENST00000473829 PNMA8CA0A1B0GUJ8 204 aa15.57■□□□□ 0.08
PTCD3-210ENST00000473829 ALX3O95076 343 aa15.57■□□□□ 0.08
PTCD3-210ENST00000473829 CDK1P06493 297 aa15.57■□□□□ 0.08
PTCD3-210ENST00000473829 HCKP08631 526 aa15.57■□□□□ 0.08
PTCD3-210ENST00000473829 WNT4P56705 351 aa15.57■□□□□ 0.08
PTCD3-210ENST00000473829 ZP1P60852 638 aa15.57■□□□□ 0.08
PTCD3-210ENST00000473829 RPS11P62280 158 aaKnown RBP eCLIP15.57■□□□□ 0.08
PTCD3-210ENST00000473829 COL10A1Q03692 680 aa15.57■□□□□ 0.08
PTCD3-210ENST00000473829 RIPK1Q13546 671 aa15.57■□□□□ 0.08
PTCD3-210ENST00000473829 GPR157Q5UAW9 335 aa15.57■□□□□ 0.08
PTCD3-210ENST00000473829 MKXQ8IYA7 352 aa15.57■□□□□ 0.08
PTCD3-210ENST00000473829 KIR3DL3Q8N743 410 aa15.57■□□□□ 0.08
PTCD3-210ENST00000473829 NANOGP1Q8N7R0 232 aa15.57■□□□□ 0.08
PTCD3-210ENST00000473829 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.57■□□□□ 0.08
PTCD3-210ENST00000473829 LHX4Q969G2 390 aa15.57■□□□□ 0.08
PTCD3-210ENST00000473829 TMEM106AQ96A25 262 aa15.57■□□□□ 0.08
PTCD3-210ENST00000473829 C1orf147Q96MC9 270 aaPredicted RBP15.57■□□□□ 0.08
PTCD3-210ENST00000473829 VCX3BQ9H321 246 aa15.57■□□□□ 0.08
PTCD3-210ENST00000473829 SIRT7Q9NRC8 400 aa15.57■□□□□ 0.08
PTCD3-210ENST00000473829 ZNF281Q9Y2X9 895 aa15.57■□□□□ 0.08
PTCD3-210ENST00000473829 TRBV5-5A0A0J9YX44 114 aa15.56■□□□□ 0.08
PTCD3-210ENST00000473829 A0A1W2PQ09 198 aa15.56■□□□□ 0.08
PTCD3-210ENST00000473829 PTGES3LE9PB15 166 aa15.56■□□□□ 0.08
PTCD3-210ENST00000473829 MYL12BO14950 172 aa15.56■□□□□ 0.08
PTCD3-210ENST00000473829 ZNF737O75373 536 aa15.56■□□□□ 0.08
PTCD3-210ENST00000473829 TK1P04183 234 aa15.56■□□□□ 0.08
PTCD3-210ENST00000473829 SNU13P55769 128 aaKnown RBP15.56■□□□□ 0.08
PTCD3-210ENST00000473829 KISS1Q15726 138 aa15.56■□□□□ 0.08
PTCD3-210ENST00000473829 PDZD9Q8IXQ8 264 aa15.56■□□□□ 0.08
PTCD3-210ENST00000473829 Q8IYB0 196 aa15.56■□□□□ 0.08
PTCD3-210ENST00000473829 DMRTB1Q96MA1 342 aa15.56■□□□□ 0.08
PTCD3-210ENST00000473829 NKX3-1Q99801 234 aaPredicted RBP15.56■□□□□ 0.08
PTCD3-210ENST00000473829 PCDHGB5Q9Y5G0 923 aa15.56■□□□□ 0.08
PTCD3-210ENST00000473829 TRBV23-1A0A0A0MS06 115 aa15.55■□□□□ 0.08
PTCD3-210ENST00000473829 KDM4BO94953 1096 aa15.55■□□□□ 0.08
PTCD3-210ENST00000473829 CYB5AP00167 134 aa15.55■□□□□ 0.08
PTCD3-210ENST00000473829 PRKACAP17612 351 aa15.55■□□□□ 0.08
PTCD3-210ENST00000473829 RAB3AP20336 220 aa15.55■□□□□ 0.08
PTCD3-210ENST00000473829 DUSP1P28562 367 aa15.55■□□□□ 0.08
PTCD3-210ENST00000473829 SLC35A2P78381 396 aa15.55■□□□□ 0.08
PTCD3-210ENST00000473829 PDCD1Q15116 288 aa15.55■□□□□ 0.08
PTCD3-210ENST00000473829 FAM185AQ8N0U4 392 aa15.55■□□□□ 0.08
PTCD3-210ENST00000473829 FAM58AQ8N1B3 248 aa15.55■□□□□ 0.08
PTCD3-210ENST00000473829 ASCC1Q8N9N2 400 aaKnown RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms