RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 PRDX2P32119 198 aa17.28■□□□□ 0.36
TOP3A-204ENST00000472959 ZNF93P35789 620 aaPredicted RBP17.28■□□□□ 0.36
TOP3A-204ENST00000472959 GABRA2P47869 451 aa17.28■□□□□ 0.36
TOP3A-204ENST00000472959 RPS25P62851 125 aaKnown RBP17.28■□□□□ 0.36
TOP3A-204ENST00000472959 INSL4Q14641 139 aa17.28■□□□□ 0.36
TOP3A-204ENST00000472959 LRRC10Q5BKY1 277 aa17.28■□□□□ 0.36
TOP3A-204ENST00000472959 FAM58AQ8N1B3 248 aa17.28■□□□□ 0.36
TOP3A-204ENST00000472959 FAM216BQ8N7L0 139 aa17.28■□□□□ 0.36
TOP3A-204ENST00000472959 PXT1Q8NFP0 134 aa17.28■□□□□ 0.36
TOP3A-204ENST00000472959 EMG1Q92979 244 aaKnown RBP17.28■□□□□ 0.36
TOP3A-204ENST00000472959 GAFA1Q96PS6 74 aa17.28■□□□□ 0.36
TOP3A-204ENST00000472959 SEBOXQ9HB31 216 aaPredicted RBP17.28■□□□□ 0.36
TOP3A-204ENST00000472959 SMURF1Q9HCE7 757 aa17.28■□□□□ 0.36
TOP3A-204ENST00000472959 SF3B6Q9Y3B4 125 aaKnown RBP17.28■□□□□ 0.36
TOP3A-204ENST00000472959 ABCA2Q9BZC7 2435 aa17.28■□□□□ 0.36
TOP3A-204ENST00000472959 LOC105371242A0A075B767 164 aa17.27■□□□□ 0.36
TOP3A-204ENST00000472959 IGKV1-12A0A0C4DH73 117 aa17.27■□□□□ 0.36
TOP3A-204ENST00000472959 INAFM1C9JVW0 142 aa17.27■□□□□ 0.36
TOP3A-204ENST00000472959 GABRPO00591 440 aa17.27■□□□□ 0.36
TOP3A-204ENST00000472959 RGS9O75916 674 aaPredicted RBP17.27■□□□□ 0.36
TOP3A-204ENST00000472959 INMTO95050 263 aa17.27■□□□□ 0.36
TOP3A-204ENST00000472959 ECDO95905 644 aaPredicted RBP17.27■□□□□ 0.36
TOP3A-204ENST00000472959 IGKV1D-12P01611 117 aa17.27■□□□□ 0.36
TOP3A-204ENST00000472959 UCHL1P09936 223 aa17.27■□□□□ 0.36
TOP3A-204ENST00000472959 BCL3P20749 454 aa17.27■□□□□ 0.36
TOP3A-204ENST00000472959 PTGFRP43088 359 aa17.27■□□□□ 0.36
TOP3A-204ENST00000472959 NPBWR2P48146 333 aa17.27■□□□□ 0.36
TOP3A-204ENST00000472959 BMXP51813 675 aa17.27■□□□□ 0.36
TOP3A-204ENST00000472959 SSX1Q16384 188 aa17.27■□□□□ 0.36
TOP3A-204ENST00000472959 CR1LQ2VPA4 569 aa17.27■□□□□ 0.36
TOP3A-204ENST00000472959 HSD17B12Q53GQ0 312 aa17.27■□□□□ 0.36
TOP3A-204ENST00000472959 DCAF12L2Q5VW00 463 aa17.27■□□□□ 0.36
TOP3A-204ENST00000472959 FAHD2BQ6P2I3 314 aaPredicted RBP17.27■□□□□ 0.36
TOP3A-204ENST00000472959 BATF2Q8N1L9 274 aa17.27■□□□□ 0.36
TOP3A-204ENST00000472959 NKAIN3Q8N8D7 197 aa17.27■□□□□ 0.36
TOP3A-204ENST00000472959 PNLDC1Q8NA58 520 aaKnown RBP17.27■□□□□ 0.36
TOP3A-204ENST00000472959 TNFAIP8L1Q8WVP5 186 aa17.27■□□□□ 0.36
TOP3A-204ENST00000472959 FAHD2AQ96GK7 314 aa17.27■□□□□ 0.36
TOP3A-204ENST00000472959 TCF7L1Q9HCS4 588 aa17.27■□□□□ 0.36
TOP3A-204ENST00000472959 RBFOX1Q9NWB1 397 aaKnown RBP17.27■□□□□ 0.36
TOP3A-204ENST00000472959 NDUFB11Q9NX14 153 aa17.27■□□□□ 0.36
TOP3A-204ENST00000472959 LPAR3Q9UBY5 353 aa17.27■□□□□ 0.36
TOP3A-204ENST00000472959 MALRD1Q5VYJ5 2156 aa17.27■□□□□ 0.36
TOP3A-204ENST00000472959 CCRL2O00421 344 aa17.26■□□□□ 0.35
TOP3A-204ENST00000472959 PSMB9P28065 219 aa17.26■□□□□ 0.35
TOP3A-204ENST00000472959 PAX2Q02962 417 aa17.26■□□□□ 0.35
TOP3A-204ENST00000472959 IKZF1Q13422 519 aa17.26■□□□□ 0.35
TOP3A-204ENST00000472959 ASCL4Q6XD76 172 aa17.26■□□□□ 0.35
TOP3A-204ENST00000472959 TMEM91Q6ZNR0 172 aa17.26■□□□□ 0.35
TOP3A-204ENST00000472959 ZNF561Q8N587 486 aa17.26■□□□□ 0.35
TOP3A-204ENST00000472959 CD177Q8N6Q3 437 aa17.26■□□□□ 0.35
TOP3A-204ENST00000472959 RAB40AQ8WXH6 277 aa17.26■□□□□ 0.35
TOP3A-204ENST00000472959 HMG20AQ9NP66 347 aa17.26■□□□□ 0.35
TOP3A-204ENST00000472959 MMP26Q9NRE1 261 aa17.26■□□□□ 0.35
TOP3A-204ENST00000472959 GLS2Q9UI32 602 aa17.26■□□□□ 0.35
TOP3A-204ENST00000472959 CDC42EP3Q9UKI2 254 aa17.26■□□□□ 0.35
TOP3A-204ENST00000472959 MAB21L2Q9Y586 359 aa17.26■□□□□ 0.35
TOP3A-204ENST00000472959 INSIG2Q9Y5U4 225 aa17.26■□□□□ 0.35
TOP3A-204ENST00000472959 A0A087WXM4 84 aa17.25■□□□□ 0.35
TOP3A-204ENST00000472959 A0A1B0GW55 424 aa17.25■□□□□ 0.35
TOP3A-204ENST00000472959 ARL6IP5O75915 188 aa17.25■□□□□ 0.35
TOP3A-204ENST00000472959 MAS1P04201 325 aa17.25■□□□□ 0.35
TOP3A-204ENST00000472959 DUX4L2P0CJ85 424 aa17.25■□□□□ 0.35
TOP3A-204ENST00000472959 DUX4L3P0CJ86 424 aa17.25■□□□□ 0.35
TOP3A-204ENST00000472959 DUX4L4P0CJ87 422 aa17.25■□□□□ 0.35
TOP3A-204ENST00000472959 DUX4L5P0CJ88 424 aa17.25■□□□□ 0.35
TOP3A-204ENST00000472959 DUX4L6P0CJ89 424 aa17.25■□□□□ 0.35
TOP3A-204ENST00000472959 DUX4L7P0CJ90 424 aa17.25■□□□□ 0.35
TOP3A-204ENST00000472959 SRMP19623 302 aa17.25■□□□□ 0.35
TOP3A-204ENST00000472959 HNF1AP20823 631 aa17.25■□□□□ 0.35
TOP3A-204ENST00000472959 DGUOKQ16854 277 aa17.25■□□□□ 0.35
TOP3A-204ENST00000472959 SPIN3Q5JUX0 258 aa17.25■□□□□ 0.35
TOP3A-204ENST00000472959 FAM120AOSQ5T036 256 aa17.25■□□□□ 0.35
TOP3A-204ENST00000472959 FAM27D1Q5T7N8 215 aa17.25■□□□□ 0.35
TOP3A-204ENST00000472959 ELP2Q6IA86 826 aa17.25■□□□□ 0.35
TOP3A-204ENST00000472959 DUX4L9Q6RFH8 374 aaPredicted RBP17.25■□□□□ 0.35
TOP3A-204ENST00000472959 BTNL3Q6UXE8 466 aa17.25■□□□□ 0.35
TOP3A-204ENST00000472959 TEX29Q8N6K0 151 aa17.25■□□□□ 0.35
TOP3A-204ENST00000472959 TSPAN14Q8NG11 270 aa17.25■□□□□ 0.35
TOP3A-204ENST00000472959 ST8SIA4Q92187 359 aa17.25■□□□□ 0.35
TOP3A-204ENST00000472959 FAM192AQ9GZU8 254 aa17.25■□□□□ 0.35
TOP3A-204ENST00000472959 SHARPINQ9H0F6 387 aa17.25■□□□□ 0.35
TOP3A-204ENST00000472959 SLITRK2Q9H156 845 aa17.25■□□□□ 0.35
TOP3A-204ENST00000472959 ZNF696Q9H7X3 374 aa17.25■□□□□ 0.35
TOP3A-204ENST00000472959 DUX4Q9UBX2 424 aa17.25■□□□□ 0.35
TOP3A-204ENST00000472959 SLC25A10Q9UBX3 287 aaPredicted RBP17.25■□□□□ 0.35
TOP3A-204ENST00000472959 OR14J1Q9UGF5 321 aa17.25■□□□□ 0.35
TOP3A-204ENST00000472959 IGHV2-70DA0A0C4DH43 119 aa17.24■□□□□ 0.35
TOP3A-204ENST00000472959 KIR2DS1A0A191URI9 304 aa17.24■□□□□ 0.35
TOP3A-204ENST00000472959 MAGEA13PA6NCF6 341 aa17.24■□□□□ 0.35
TOP3A-204ENST00000472959 ENSAO43768 121 aaKnown RBP17.24■□□□□ 0.35
TOP3A-204ENST00000472959 FCN3O75636 299 aa17.24■□□□□ 0.35
TOP3A-204ENST00000472959 TFF1P04155 84 aa17.24■□□□□ 0.35
TOP3A-204ENST00000472959 LIPFP07098 398 aa17.24■□□□□ 0.35
TOP3A-204ENST00000472959 SFTPBP07988 381 aa17.24■□□□□ 0.35
TOP3A-204ENST00000472959 CHRM2P08172 466 aa17.24■□□□□ 0.35
TOP3A-204ENST00000472959 PRKACAP17612 351 aa17.24■□□□□ 0.35
TOP3A-204ENST00000472959 GALP22466 123 aa17.24■□□□□ 0.35
TOP3A-204ENST00000472959 OR3A4PP47883 348 aa17.24■□□□□ 0.35
TOP3A-204ENST00000472959 MTNR1BP49286 362 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms