RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 FSTL3O95633 263 aa2.41□□□□□ -2.02
PRPF40A-208ENST00000472760 RLN2P04090 185 aa2.41□□□□□ -2.02
PRPF40A-208ENST00000472760 ZNF35P13682 527 aa2.41□□□□□ -2.02
PRPF40A-208ENST00000472760 TAC1P20366 129 aa2.41□□□□□ -2.02
PRPF40A-208ENST00000472760 TEAD1P28347 426 aa2.41□□□□□ -2.02
PRPF40A-208ENST00000472760 CD34P28906 385 aa2.41□□□□□ -2.02
PRPF40A-208ENST00000472760 ATP5J2P56134 94 aa2.41□□□□□ -2.02
PRPF40A-208ENST00000472760 KRTAP10-1P60331 282 aa2.41□□□□□ -2.02
PRPF40A-208ENST00000472760 FMODQ06828 376 aa2.41□□□□□ -2.02
PRPF40A-208ENST00000472760 LINC00303Q3SY05 128 aa2.41□□□□□ -2.02
PRPF40A-208ENST00000472760 SPIN3Q5JUX0 258 aa2.41□□□□□ -2.02
PRPF40A-208ENST00000472760 FA2HQ7L5A8 372 aa2.41□□□□□ -2.02
PRPF40A-208ENST00000472760 ADM2Q7Z4H4 148 aa2.41□□□□□ -2.02
PRPF40A-208ENST00000472760 PDCL2Q8N4E4 241 aa2.41□□□□□ -2.02
PRPF40A-208ENST00000472760 LINC00337Q8N6G1 96 aa2.41□□□□□ -2.02
PRPF40A-208ENST00000472760 DOK4Q8TEW6 326 aa2.41□□□□□ -2.02
PRPF40A-208ENST00000472760 CDKL2Q92772 493 aa2.41□□□□□ -2.02
PRPF40A-208ENST00000472760 ADTRPQ96IZ2 230 aa2.41□□□□□ -2.02
PRPF40A-208ENST00000472760 VAT1Q99536 393 aa2.41□□□□□ -2.02
PRPF40A-208ENST00000472760 SHCBP1LQ9BZQ2 653 aa2.41□□□□□ -2.02
PRPF40A-208ENST00000472760 PRORYQ9H606 182 aa2.41□□□□□ -2.02
PRPF40A-208ENST00000472760 TRIM45Q9H8W5 580 aaPredicted RBP2.41□□□□□ -2.02
PRPF40A-208ENST00000472760 TMEM38BQ9NVV0 291 aa2.41□□□□□ -2.02
PRPF40A-208ENST00000472760 NLE1Q9NVX2 485 aaPredicted RBP2.41□□□□□ -2.02
PRPF40A-208ENST00000472760 ZNF492Q9P255 531 aa2.41□□□□□ -2.02
PRPF40A-208ENST00000472760 TAC3Q9UHF0 121 aa2.41□□□□□ -2.02
PRPF40A-208ENST00000472760 ZNF391Q9UJN7 358 aa2.41□□□□□ -2.02
PRPF40A-208ENST00000472760 ZNF780BQ9Y6R6 833 aa2.41□□□□□ -2.02
PRPF40A-208ENST00000472760 KIR2DS1A0A191URI9 304 aa2.4□□□□□ -2.03
PRPF40A-208ENST00000472760 LOC389332A0A1B0GUA5 103 aa2.4□□□□□ -2.03
PRPF40A-208ENST00000472760 ENSAO43768 121 aaKnown RBP2.4□□□□□ -2.03
PRPF40A-208ENST00000472760 CBR3O75828 277 aa2.4□□□□□ -2.03
PRPF40A-208ENST00000472760 IGLV6-57P01721 117 aa2.4□□□□□ -2.03
PRPF40A-208ENST00000472760 IGHG2P01859 326 aa2.4□□□□□ -2.03
PRPF40A-208ENST00000472760 CCDC172P0C7W6 258 aa2.4□□□□□ -2.03
PRPF40A-208ENST00000472760 INAFM2P0DMQ5 153 aa2.4□□□□□ -2.03
PRPF40A-208ENST00000472760 BGNP21810 368 aa2.4□□□□□ -2.03
PRPF40A-208ENST00000472760 ACOT2P49753 483 aa2.4□□□□□ -2.03
PRPF40A-208ENST00000472760 SSX1Q16384 188 aa2.4□□□□□ -2.03
PRPF40A-208ENST00000472760 SYS1Q8N2H4 156 aa2.4□□□□□ -2.03
PRPF40A-208ENST00000472760 ZFP62Q8NB50 900 aaPredicted RBP2.4□□□□□ -2.03
PRPF40A-208ENST00000472760 ZNF555Q8NEP9 628 aa2.4□□□□□ -2.03
PRPF40A-208ENST00000472760 OR4C13Q8NGP0 309 aa2.4□□□□□ -2.03
PRPF40A-208ENST00000472760 OR8K3Q8NH51 312 aa2.4□□□□□ -2.03
PRPF40A-208ENST00000472760 OR51Q1Q8NH59 317 aa2.4□□□□□ -2.03
PRPF40A-208ENST00000472760 UBA3Q8TBC4 463 aa2.4□□□□□ -2.03
PRPF40A-208ENST00000472760 CACNG8Q8WXS5 425 aa2.4□□□□□ -2.03
PRPF40A-208ENST00000472760 ZBED3Q96IU2 234 aaPredicted RBP2.4□□□□□ -2.03
PRPF40A-208ENST00000472760 COPS4Q9BT78 406 aa2.4□□□□□ -2.03
PRPF40A-208ENST00000472760 PLA2G12AQ9BZM1 189 aa2.4□□□□□ -2.03
PRPF40A-208ENST00000472760 TSGA10Q9BZW7 698 aa2.4□□□□□ -2.03
PRPF40A-208ENST00000472760 ASB7Q9H672 318 aa2.4□□□□□ -2.03
PRPF40A-208ENST00000472760 ACOT13Q9NPJ3 140 aa2.4□□□□□ -2.03
PRPF40A-208ENST00000472760 A0A1W2PNN7 141 aa2.39□□□□□ -2.03
PRPF40A-208ENST00000472760 GMNCA6NCL1 334 aa2.39□□□□□ -2.03
PRPF40A-208ENST00000472760 OR2AT4A6NND4 320 aa2.39□□□□□ -2.03
PRPF40A-208ENST00000472760 C4orf51C9J302 202 aa2.39□□□□□ -2.03
PRPF40A-208ENST00000472760 UPK2O00526 184 aa2.39□□□□□ -2.03
PRPF40A-208ENST00000472760 COX7A2P2O60397 106 aa2.39□□□□□ -2.03
PRPF40A-208ENST00000472760 SC5DO75845 299 aa2.39□□□□□ -2.03
PRPF40A-208ENST00000472760 VAPBO95292 243 aa2.39□□□□□ -2.03
PRPF40A-208ENST00000472760 CCNOP22674 350 aa2.39□□□□□ -2.03
PRPF40A-208ENST00000472760 IMPA1P29218 277 aa2.39□□□□□ -2.03
PRPF40A-208ENST00000472760 DSTNP60981 165 aa2.39□□□□□ -2.03
PRPF40A-208ENST00000472760 STX4Q12846 297 aa2.39□□□□□ -2.03
PRPF40A-208ENST00000472760 VAMP3Q15836 100 aa2.39□□□□□ -2.03
PRPF40A-208ENST00000472760 TAF9Q16594 264 aa2.39□□□□□ -2.03
PRPF40A-208ENST00000472760 ZNF404Q494X3 552 aa2.39□□□□□ -2.03
PRPF40A-208ENST00000472760 DEFB134Q4QY38 66 aa2.39□□□□□ -2.03
PRPF40A-208ENST00000472760 TTMPQ5BVD1 217 aa2.39□□□□□ -2.03
PRPF40A-208ENST00000472760 CLLU1OSQ5K130 101 aa2.39□□□□□ -2.03
PRPF40A-208ENST00000472760 RESP18Q5W5W9 173 aa2.39□□□□□ -2.03
PRPF40A-208ENST00000472760 PAGE2Q7Z2X7 111 aa2.39□□□□□ -2.03
PRPF40A-208ENST00000472760 TMEM144Q7Z5S9 345 aa2.39□□□□□ -2.03
PRPF40A-208ENST00000472760 CYP4Z1Q86W10 505 aa2.39□□□□□ -2.03
PRPF40A-208ENST00000472760 ZNF664Q8N3J9 261 aa2.39□□□□□ -2.03
PRPF40A-208ENST00000472760 OR8A1Q8NGG7 326 aa2.39□□□□□ -2.03
PRPF40A-208ENST00000472760 GLT1D1Q96MS3 346 aa2.39□□□□□ -2.03
PRPF40A-208ENST00000472760 OR2V2Q96R30 315 aa2.39□□□□□ -2.03
PRPF40A-208ENST00000472760 CIB1Q99828 191 aa2.39□□□□□ -2.03
PRPF40A-208ENST00000472760 TM2D3Q9BRN9 247 aa2.39□□□□□ -2.03
PRPF40A-208ENST00000472760 DUSP21Q9H596 190 aa2.39□□□□□ -2.03
PRPF40A-208ENST00000472760 STMN3Q9NZ72 180 aa2.39□□□□□ -2.03
PRPF40A-208ENST00000472760 IGLL5B9A064 214 aa2.38□□□□□ -2.03
PRPF40A-208ENST00000472760 SLC37A4O43826 429 aa2.38□□□□□ -2.03
PRPF40A-208ENST00000472760 P0C880 135 aa2.38□□□□□ -2.03
PRPF40A-208ENST00000472760 COL8A2P25067 703 aa2.38□□□□□ -2.03
PRPF40A-208ENST00000472760 RANBP1P43487 201 aa2.38□□□□□ -2.03
PRPF40A-208ENST00000472760 XKP51811 444 aa2.38□□□□□ -2.03
PRPF40A-208ENST00000472760 CCL23P55773 120 aa2.38□□□□□ -2.03
PRPF40A-208ENST00000472760 IHHQ14623 411 aa2.38□□□□□ -2.03
PRPF40A-208ENST00000472760 UBE2NLQ5JXB2 153 aa2.38□□□□□ -2.03
PRPF40A-208ENST00000472760 CLEC12AQ5QGZ9 265 aa2.38□□□□□ -2.03
PRPF40A-208ENST00000472760 LDLRAD2Q5SZI1 272 aa2.38□□□□□ -2.03
PRPF40A-208ENST00000472760 LCE1CQ5T751 118 aa2.38□□□□□ -2.03
PRPF40A-208ENST00000472760 LCE1BQ5T7P3 118 aa2.38□□□□□ -2.03
PRPF40A-208ENST00000472760 LIN9Q5TKA1 542 aa2.38□□□□□ -2.03
PRPF40A-208ENST00000472760 ZNF773Q6PK81 442 aa2.38□□□□□ -2.03
PRPF40A-208ENST00000472760 USP50Q70EL3 339 aaPredicted RBP2.38□□□□□ -2.03
PRPF40A-208ENST00000472760 LINC00596Q86U02 117 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms