RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 SERTAD4Q9NUC0 356 aa6.52□□□□□ -1.37
USP48-207ENST00000471752 RBFOX1Q9NWB1 397 aaKnown RBP6.52□□□□□ -1.37
USP48-207ENST00000471752 RASL12Q9NYN1 266 aa6.52□□□□□ -1.37
USP48-207ENST00000471752 FBLN5Q9UBX5 448 aa6.52□□□□□ -1.37
USP48-207ENST00000471752 SF3B6Q9Y3B4 125 aaKnown RBP6.52□□□□□ -1.37
USP48-207ENST00000471752 AP4S1Q9Y587 144 aa6.52□□□□□ -1.37
USP48-207ENST00000471752 SNX5Q9Y5X3 404 aa6.52□□□□□ -1.37
USP48-207ENST00000471752 TRBV23-1A0A0A0MS06 115 aa6.51□□□□□ -1.37
USP48-207ENST00000471752 FAM172BPA6NC97 362 aa6.51□□□□□ -1.37
USP48-207ENST00000471752 METTL15A6NJ78 407 aa6.51□□□□□ -1.37
USP48-207ENST00000471752 ODF3BA8MYP8 253 aa6.51□□□□□ -1.37
USP48-207ENST00000471752 E9PQ18 207 aa6.51□□□□□ -1.37
USP48-207ENST00000471752 ZNF670-ZNF695F2Z2N8 137 aa6.51□□□□□ -1.37
USP48-207ENST00000471752 J3QRE1 110 aa6.51□□□□□ -1.37
USP48-207ENST00000471752 DLGAP1O14490 977 aa6.51□□□□□ -1.37
USP48-207ENST00000471752 PSPNO60542 156 aa6.51□□□□□ -1.37
USP48-207ENST00000471752 ENTPD6O75354 484 aa6.51□□□□□ -1.37
USP48-207ENST00000471752 VSIG10L2P0DP72 767 aa6.51□□□□□ -1.37
USP48-207ENST00000471752 ATP6V1B1P15313 513 aa6.51□□□□□ -1.37
USP48-207ENST00000471752 BCL3P20749 454 aa6.51□□□□□ -1.37
USP48-207ENST00000471752 KIR2DS4P43632 304 aa6.51□□□□□ -1.37
USP48-207ENST00000471752 OR12D2P58182 307 aa6.51□□□□□ -1.37
USP48-207ENST00000471752 ISL1P61371 349 aa6.51□□□□□ -1.37
USP48-207ENST00000471752 ACSM1Q08AH1 577 aa6.51□□□□□ -1.37
USP48-207ENST00000471752 SSX2Q16385 188 aa6.51□□□□□ -1.37
USP48-207ENST00000471752 OCLNQ16625 522 aa6.51□□□□□ -1.37
USP48-207ENST00000471752 LRRC75BQ2VPJ9 315 aa6.51□□□□□ -1.37
USP48-207ENST00000471752 ZIK1Q3SY52 487 aaPredicted RBP6.51□□□□□ -1.37
USP48-207ENST00000471752 LCN1P1Q5VSP4 162 aa6.51□□□□□ -1.37
USP48-207ENST00000471752 SLC25A26Q70HW3 274 aa6.51□□□□□ -1.37
USP48-207ENST00000471752 ZNF573Q86YE8 665 aa6.51□□□□□ -1.37
USP48-207ENST00000471752 EGFL6Q8IUX8 553 aa6.51□□□□□ -1.37
USP48-207ENST00000471752 KLHDC1Q8N7A1 406 aa6.51□□□□□ -1.37
USP48-207ENST00000471752 ASCC1Q8N9N2 400 aaKnown RBP6.51□□□□□ -1.37
USP48-207ENST00000471752 OR4S1Q8NGB4 309 aa6.51□□□□□ -1.37
USP48-207ENST00000471752 PYDC1Q8WXC3 89 aa6.51□□□□□ -1.37
USP48-207ENST00000471752 CFHR4Q92496 578 aa6.51□□□□□ -1.37
USP48-207ENST00000471752 FGGYQ96C11 551 aa6.51□□□□□ -1.37
USP48-207ENST00000471752 DMRTB1Q96MA1 342 aa6.51□□□□□ -1.37
USP48-207ENST00000471752 GABARAPL1Q9H0R8 117 aa6.51□□□□□ -1.37
USP48-207ENST00000471752 FRRS1LQ9P0K9 344 aa6.51□□□□□ -1.37
USP48-207ENST00000471752 H2AFY2Q9P0M6 372 aaPredicted RBP6.51□□□□□ -1.37
USP48-207ENST00000471752 ZNF581Q9P0T4 197 aa6.51□□□□□ -1.37
USP48-207ENST00000471752 OAZ3Q9UMX2 235 aa6.51□□□□□ -1.37
USP48-207ENST00000471752 HILPDAQ9Y5L2 63 aa6.51□□□□□ -1.37
USP48-207ENST00000471752 LOC107986453A0A1B0GWG9 222 aa6.5□□□□□ -1.37
USP48-207ENST00000471752 A6NDX4 124 aa6.5□□□□□ -1.37
USP48-207ENST00000471752 E9PI62 339 aa6.5□□□□□ -1.37
USP48-207ENST00000471752 H3BNX3 289 aa6.5□□□□□ -1.37
USP48-207ENST00000471752 SLC1A7O00341 560 aa6.5□□□□□ -1.37
USP48-207ENST00000471752 TIMM23O14925 209 aa6.5□□□□□ -1.37
USP48-207ENST00000471752 SYT7O43581 403 aa6.5□□□□□ -1.37
USP48-207ENST00000471752 SNRPBP14678 240 aaKnown RBP6.5□□□□□ -1.37
USP48-207ENST00000471752 FASP25445 335 aa6.5□□□□□ -1.37
USP48-207ENST00000471752 HTR1FP30939 366 aa6.5□□□□□ -1.37
USP48-207ENST00000471752 RPL15P61313 204 aaKnown RBP6.5□□□□□ -1.37
USP48-207ENST00000471752 IL24Q13007 206 aa6.5□□□□□ -1.37
USP48-207ENST00000471752 EDDM3AQ14507 147 aa6.5□□□□□ -1.37
USP48-207ENST00000471752 FAM189A2Q15884 450 aa6.5□□□□□ -1.37
USP48-207ENST00000471752 SNCBQ16143 134 aa6.5□□□□□ -1.37
USP48-207ENST00000471752 SMIM21Q3B7S5 101 aa6.5□□□□□ -1.37
USP48-207ENST00000471752 NSUN5P1Q3KNT7 163 aa6.5□□□□□ -1.37
USP48-207ENST00000471752 OXLD1Q5BKU9 147 aa6.5□□□□□ -1.37
USP48-207ENST00000471752 ZBTB37Q5TC79 503 aa6.5□□□□□ -1.37
USP48-207ENST00000471752 NCR3LG1Q68D85 454 aa6.5□□□□□ -1.37
USP48-207ENST00000471752 C10orf99Q6UWK7 81 aa6.5□□□□□ -1.37
USP48-207ENST00000471752 ZNF561Q8N587 486 aa6.5□□□□□ -1.37
USP48-207ENST00000471752 OR5D13Q8NGL4 314 aa6.5□□□□□ -1.37
USP48-207ENST00000471752 OR5R1Q8NH85 324 aa6.5□□□□□ -1.37
USP48-207ENST00000471752 WIPF2Q8TF74 440 aaPredicted RBP6.5□□□□□ -1.37
USP48-207ENST00000471752 OSBPL10Q9BXB5 764 aa6.5□□□□□ -1.37
USP48-207ENST00000471752 CDCA4Q9BXL8 241 aa6.5□□□□□ -1.37
USP48-207ENST00000471752 MMP28Q9H239 520 aa6.5□□□□□ -1.37
USP48-207ENST00000471752 HEXA-AS1Q9H8Q6 139 aa6.5□□□□□ -1.37
USP48-207ENST00000471752 ABCB9Q9NP78 766 aa6.5□□□□□ -1.37
USP48-207ENST00000471752 ING3Q9NXR8 418 aa6.5□□□□□ -1.37
USP48-207ENST00000471752 GNG8Q9UK08 70 aa6.5□□□□□ -1.37
USP48-207ENST00000471752 TMEM14AQ9Y6G1 99 aa6.5□□□□□ -1.37
USP48-207ENST00000471752 SIRPB1O00241 398 aa6.49□□□□□ -1.37
USP48-207ENST00000471752 DYNC1I1O14576 645 aa6.49□□□□□ -1.37
USP48-207ENST00000471752 ARG1P05089 322 aa6.49□□□□□ -1.37
USP48-207ENST00000471752 KRT8P05787 483 aa6.49□□□□□ -1.37
USP48-207ENST00000471752 CSF1P09603 554 aa6.49□□□□□ -1.37
USP48-207ENST00000471752 ZNF728P0DKX0 622 aa6.49□□□□□ -1.37
USP48-207ENST00000471752 IGHV1-8P0DP01 117 aa6.49□□□□□ -1.37
USP48-207ENST00000471752 OR3A1P47881 315 aa6.49□□□□□ -1.37
USP48-207ENST00000471752 GLIPR1P48060 266 aa6.49□□□□□ -1.37
USP48-207ENST00000471752 EDDM3BP56851 147 aa6.49□□□□□ -1.37
USP48-207ENST00000471752 BLMHQ13867 455 aa6.49□□□□□ -1.37
USP48-207ENST00000471752 HERPUD1Q15011 391 aa6.49□□□□□ -1.37
USP48-207ENST00000471752 BEAN1Q3B7T3 259 aa6.49□□□□□ -1.37
USP48-207ENST00000471752 TCTEX1D4Q5JR98 221 aa6.49□□□□□ -1.37
USP48-207ENST00000471752 PRAMEF5Q5TYX0 476 aa6.49□□□□□ -1.37
USP48-207ENST00000471752 FAM53AQ6NSI3 398 aaPredicted RBP6.49□□□□□ -1.37
USP48-207ENST00000471752 ZDHHC13Q8IUH4 622 aa6.49□□□□□ -1.37
USP48-207ENST00000471752 OR5D18Q8NGL1 313 aa6.49□□□□□ -1.37
USP48-207ENST00000471752 OR2G2Q8NGZ5 317 aa6.49□□□□□ -1.37
USP48-207ENST00000471752 CEP19Q96LK0 163 aa6.49□□□□□ -1.37
USP48-207ENST00000471752 MBOAT4Q96T53 435 aa6.49□□□□□ -1.37
USP48-207ENST00000471752 SLC29A1Q99808 456 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms