RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 SLC25A26Q70HW3 274 aa12.48□□□□□ -0.41
COL1A1-203ENST00000471344 TCF23Q7RTU1 214 aa12.48□□□□□ -0.41
COL1A1-203ENST00000471344 FAM220AQ7Z4H9 259 aa12.48□□□□□ -0.41
COL1A1-203ENST00000471344 LHFPL4Q7Z7J7 247 aa12.48□□□□□ -0.41
COL1A1-203ENST00000471344 DYNAPQ8N1N2 210 aa12.48□□□□□ -0.41
COL1A1-203ENST00000471344 OR2G2Q8NGZ5 317 aa12.48□□□□□ -0.41
COL1A1-203ENST00000471344 RFKQ969G6 155 aa12.48□□□□□ -0.41
COL1A1-203ENST00000471344 CEP19Q96LK0 163 aa12.48□□□□□ -0.41
COL1A1-203ENST00000471344 SSX3Q99909 188 aa12.48□□□□□ -0.41
COL1A1-203ENST00000471344 USE1Q9NZ43 259 aa12.48□□□□□ -0.41
COL1A1-203ENST00000471344 SLC7A11Q9UPY5 501 aa12.48□□□□□ -0.41
COL1A1-203ENST00000471344 SF3B6Q9Y3B4 125 aaKnown RBP12.48□□□□□ -0.41
COL1A1-203ENST00000471344 DSCAML1Q8TD84 2053 aa12.48□□□□□ -0.41
COL1A1-203ENST00000471344 TMEM82A0PJX8 343 aa12.47□□□□□ -0.41
COL1A1-203ENST00000471344 K7N7A8 449 aa12.47□□□□□ -0.41
COL1A1-203ENST00000471344 IGHA1P01876 353 aa12.47□□□□□ -0.41
COL1A1-203ENST00000471344 NPBWR2P48146 333 aa12.47□□□□□ -0.41
COL1A1-203ENST00000471344 RCN1Q15293 331 aa12.47□□□□□ -0.41
COL1A1-203ENST00000471344 MIDNQ504T8 468 aa12.47□□□□□ -0.41
COL1A1-203ENST00000471344 PLA1AQ53H76 456 aa12.47□□□□□ -0.41
COL1A1-203ENST00000471344 LDLRAD2Q5SZI1 272 aa12.47□□□□□ -0.41
COL1A1-203ENST00000471344 SLC35E4Q6ICL7 350 aa12.47□□□□□ -0.41
COL1A1-203ENST00000471344 OR51A4Q8NGJ6 313 aa12.47□□□□□ -0.41
COL1A1-203ENST00000471344 TRUB1Q8WWH5 349 aaKnown RBP12.47□□□□□ -0.41
COL1A1-203ENST00000471344 HRASLS5Q96KN8 279 aa12.47□□□□□ -0.41
COL1A1-203ENST00000471344 C16orf95Q9H693 158 aa12.47□□□□□ -0.41
COL1A1-203ENST00000471344 RBFOX1Q9NWB1 397 aaKnown RBP12.47□□□□□ -0.41
COL1A1-203ENST00000471344 FRRS1LQ9P0K9 344 aa12.47□□□□□ -0.41
COL1A1-203ENST00000471344 CHST1O43916 411 aa12.46□□□□□ -0.41
COL1A1-203ENST00000471344 GATBO75879 557 aaKnown RBP12.46□□□□□ -0.41
COL1A1-203ENST00000471344 TSPAN9O75954 239 aa12.46□□□□□ -0.41
COL1A1-203ENST00000471344 TSPAN15O95858 294 aa12.46□□□□□ -0.41
COL1A1-203ENST00000471344 UBCP0CG48 685 aaKnown RBP12.46□□□□□ -0.41
COL1A1-203ENST00000471344 BCL3P20749 454 aa12.46□□□□□ -0.41
COL1A1-203ENST00000471344 DUSP1P28562 367 aa12.46□□□□□ -0.41
COL1A1-203ENST00000471344 POU3F4P49335 361 aa12.46□□□□□ -0.41
COL1A1-203ENST00000471344 ALDH3A2P51648 485 aa12.46□□□□□ -0.41
COL1A1-203ENST00000471344 FUT6P51993 359 aa12.46□□□□□ -0.41
COL1A1-203ENST00000471344 SNU13P55769 128 aaKnown RBP12.46□□□□□ -0.41
COL1A1-203ENST00000471344 EDDM3BP56851 147 aa12.46□□□□□ -0.41
COL1A1-203ENST00000471344 EDDM3AQ14507 147 aa12.46□□□□□ -0.41
COL1A1-203ENST00000471344 LRRC75BQ2VPJ9 315 aa12.46□□□□□ -0.41
COL1A1-203ENST00000471344 LPCAT4Q643R3 524 aa12.46□□□□□ -0.41
COL1A1-203ENST00000471344 CRIP3Q6Q6R5 217 aa12.46□□□□□ -0.41
COL1A1-203ENST00000471344 TPRX1Q8N7U7 411 aa12.46□□□□□ -0.41
COL1A1-203ENST00000471344 CCDC54Q8NEL0 328 aa12.46□□□□□ -0.41
COL1A1-203ENST00000471344 OR5R1Q8NH85 324 aa12.46□□□□□ -0.41
COL1A1-203ENST00000471344 EMG1Q92979 244 aaKnown RBP12.46□□□□□ -0.41
COL1A1-203ENST00000471344 RFT1Q96AA3 541 aa12.46□□□□□ -0.41
COL1A1-203ENST00000471344 FGGYQ96C11 551 aa12.46□□□□□ -0.41
COL1A1-203ENST00000471344 BORCS8Q96FH0 119 aa12.46□□□□□ -0.41
COL1A1-203ENST00000471344 ADI1Q9BV57 179 aa12.46□□□□□ -0.41
COL1A1-203ENST00000471344 CHST6Q9GZX3 395 aa12.46□□□□□ -0.41
COL1A1-203ENST00000471344 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.46□□□□□ -0.41
COL1A1-203ENST00000471344 DAPL1A0PJW8 107 aa12.45□□□□□ -0.42
COL1A1-203ENST00000471344 SLC16A6O15403 523 aa12.45□□□□□ -0.42
COL1A1-203ENST00000471344 TGFBR2P37173 567 aa12.45□□□□□ -0.42
COL1A1-203ENST00000471344 SNRPGP62308 76 aaKnown RBP12.45□□□□□ -0.42
COL1A1-203ENST00000471344 DEFA6Q01524 100 aa12.45□□□□□ -0.42
COL1A1-203ENST00000471344 ZNF91Q05481 1191 aa12.45□□□□□ -0.42
COL1A1-203ENST00000471344 SLC25A30Q5SVS4 291 aa12.45□□□□□ -0.42
COL1A1-203ENST00000471344 EGFL6Q8IUX8 553 aa12.45□□□□□ -0.42
COL1A1-203ENST00000471344 OR52N4Q8NGI2 321 aa12.45□□□□□ -0.42
COL1A1-203ENST00000471344 PIFOQ8TCI5 191 aa12.45□□□□□ -0.42
COL1A1-203ENST00000471344 STMN2Q93045 179 aa12.45□□□□□ -0.42
COL1A1-203ENST00000471344 LGALS12Q96DT0 336 aa12.45□□□□□ -0.42
COL1A1-203ENST00000471344 PELI1Q96FA3 418 aa12.45□□□□□ -0.42
COL1A1-203ENST00000471344 SPACA5Q96QH8 159 aa12.45□□□□□ -0.42
COL1A1-203ENST00000471344 FAM234AQ9H0X4 552 aa12.45□□□□□ -0.42
COL1A1-203ENST00000471344 MEGF9Q9H1U4 602 aa12.45□□□□□ -0.42
COL1A1-203ENST00000471344 HEXA-AS1Q9H8Q6 139 aa12.45□□□□□ -0.42
COL1A1-203ENST00000471344 TCF7L1Q9HCS4 588 aa12.45□□□□□ -0.42
COL1A1-203ENST00000471344 ORC6Q9Y5N6 252 aa12.45□□□□□ -0.42
COL1A1-203ENST00000471344 TGP01266 2768 aa12.45□□□□□ -0.42
COL1A1-203ENST00000471344 IGKV1-12A0A0C4DH73 117 aa12.44□□□□□ -0.42
COL1A1-203ENST00000471344 C17orf98A8MV24 154 aa12.44□□□□□ -0.42
COL1A1-203ENST00000471344 J3QLW9 94 aa12.44□□□□□ -0.42
COL1A1-203ENST00000471344 PSPNO60542 156 aa12.44□□□□□ -0.42
COL1A1-203ENST00000471344 HAND1O96004 215 aa12.44□□□□□ -0.42
COL1A1-203ENST00000471344 IGKV1D-12P01611 117 aa12.44□□□□□ -0.42
COL1A1-203ENST00000471344 CHRM2P08172 466 aa12.44□□□□□ -0.42
COL1A1-203ENST00000471344 ZNF19P17023 458 aa12.44□□□□□ -0.42
COL1A1-203ENST00000471344 JUNBP17275 347 aaPredicted RBP12.44□□□□□ -0.42
COL1A1-203ENST00000471344 GABRB1P18505 474 aa12.44□□□□□ -0.42
COL1A1-203ENST00000471344 AZGP1P25311 298 aaKnown RBP12.44□□□□□ -0.42
COL1A1-203ENST00000471344 PEX2P28328 305 aa12.44□□□□□ -0.42
COL1A1-203ENST00000471344 CNN3Q15417 329 aaKnown RBP12.44□□□□□ -0.42
COL1A1-203ENST00000471344 OCLNQ16625 522 aa12.44□□□□□ -0.42
COL1A1-203ENST00000471344 C10orf67Q8IYJ2 551 aa12.44□□□□□ -0.42
COL1A1-203ENST00000471344 ENTHD1Q8IYW4 607 aa12.44□□□□□ -0.42
COL1A1-203ENST00000471344 OR8H2Q8N162 312 aa12.44□□□□□ -0.42
COL1A1-203ENST00000471344 PP6455Q8WZ26 134 aa12.44□□□□□ -0.42
COL1A1-203ENST00000471344 C10orf35Q96D05 121 aa12.44□□□□□ -0.42
COL1A1-203ENST00000471344 C4orf36Q96KX1 117 aa12.44□□□□□ -0.42
COL1A1-203ENST00000471344 C9orf16Q9BUW7 83 aa12.44□□□□□ -0.42
COL1A1-203ENST00000471344 ISG20L2Q9H9L3 353 aaKnown RBP12.44□□□□□ -0.42
COL1A1-203ENST00000471344 NKX1-2Q9UD57 310 aaPredicted RBP12.44□□□□□ -0.42
COL1A1-203ENST00000471344 MYRFQ9Y2G1 1151 aa12.44□□□□□ -0.42
COL1A1-203ENST00000471344 A0A1W2PPH5 198 aa12.43□□□□□ -0.42
COL1A1-203ENST00000471344 OR4C45A6NMZ5 311 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms