RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 OR1M1Q8NGA1 313 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 OR4F17Q8NGA8 305 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 OR51E1Q8TCB6 317 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 H1FXQ92522 213 aaKnown RBP4.76□□□□□ -1.65
VARS-222ENST00000470953 RPL3LQ92901 407 aaKnown RBP4.76□□□□□ -1.65
VARS-222ENST00000470953 ISOC1Q96CN7 298 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 DUS3LQ96G46 650 aaKnown RBP4.76□□□□□ -1.65
VARS-222ENST00000470953 OR4F4Q96R69 305 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 APOL4Q9BPW4 351 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 NUDT16L1Q9BRJ7 211 aaKnown RBP4.76□□□□□ -1.65
VARS-222ENST00000470953 CENPOQ9BU64 300 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 ADGRL4Q9HBW9 690 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 FAM206AQ9NX38 181 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 ONECUT1Q9UBC0 465 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 NUFIP1Q9UHK0 495 aaKnown RBP4.76□□□□□ -1.65
VARS-222ENST00000470953 GNG8Q9UK08 70 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 VPREB3Q9UKI3 123 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 COPS3Q9UNS2 423 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 POLDIP2Q9Y2S7 368 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 GMPPBQ9Y5P6 360 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 SNX5Q9Y5X3 404 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 R4GMQ9 66 aa4.76□□□□□ -1.65
VARS-222ENST00000470953 APOBP04114 4563 aaKnown RBP4.75□□□□□ -1.65
VARS-222ENST00000470953 IGHV1-69DA0A0B4J2H0 117 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 LOC105371267A0A1B0GV96 52 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 A0A1B0GVG6 124 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 A0A1B0GWJ7 208 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 A0A1W2PRX2 142 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 DAPL1A0PJW8 107 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 A6NJY4 79 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 ZNF732B4DXR9 585 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 ANKRD65E5RJM6 399 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 RNASEK-C17orf49H0YIS7 233 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 H3BSH0 61 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 P2RY10O00398 339 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 SYT7O43581 403 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 NDUFB3O43676 98 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 MPZL2O60487 215 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 GATBO75879 557 aaKnown RBP4.75□□□□□ -1.65
VARS-222ENST00000470953 PAHP00439 452 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 CST4P01036 141 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 NRASP01111 189 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 IGHV1-69P01742 117 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 OR2T7P0C7T2 308 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 MUC1P15941 1255 aaPredicted RBP4.75□□□□□ -1.65
VARS-222ENST00000470953 ZNF20P17024 532 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 CTRB1P17538 263 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 NDUFB7P17568 137 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 ANOS1P23352 680 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 GLRA1P23415 457 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 ACKR3P25106 362 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 DCTDP32321 178 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 CFHR2P36980 270 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 PMELP40967 661 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 GABRA2P47869 451 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 ACTA2P62736 377 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 ACTG2P63267 376 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 ROM1Q03395 351 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 HABP2Q14520 560 aaPredicted RBP4.75□□□□□ -1.65
VARS-222ENST00000470953 SMIM21Q3B7S5 101 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 AADACL4Q5VUY2 407 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 MEDAGQ5VYS4 303 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 WDR25Q64LD2 544 aaPredicted RBP4.75□□□□□ -1.65
VARS-222ENST00000470953 CTRB2Q6GPI1 263 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 HAGHLQ6PII5 290 aaPredicted RBP4.75□□□□□ -1.65
VARS-222ENST00000470953 LYPD2Q6UXB3 125 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 WDR82Q6UXN9 313 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 ZBTB49Q6ZSB9 765 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 PRSS45Q7RTY3 260 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 NDUFA11Q86Y39 141 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 FAM90A1Q86YD7 464 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 CROCCP3Q8IVE0 287 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 TMEM185AQ8NFB2 350 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 OR2T27Q8NH04 317 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 ZNF671Q8TAW3 534 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 NPRL2Q8WTW4 380 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 GATAD2BQ8WXI9 593 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 RNFT2Q96EX2 444 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 Q96MT0 163 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 RBM14Q96PK6 669 aaKnown RBP4.75□□□□□ -1.65
VARS-222ENST00000470953 DPAGT1Q9H3H5 408 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 RNPEPL1Q9HAU8 725 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 GPR173Q9NS66 373 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 SNTG1Q9NSN8 517 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 MBD2Q9UBB5 411 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 OR52A1Q9UKL2 312 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 SLC7A11Q9UPY5 501 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 LRRC42Q9Y546 428 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 DNAH17Q9UFH2 4485 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 DNAH6Q9C0G6 4158 aa4.75□□□□□ -1.65
VARS-222ENST00000470953 LOC107986453A0A1B0GWG9 222 aa4.74□□□□□ -1.65
VARS-222ENST00000470953 FAM230AA0A1W2PPH8 454 aa4.74□□□□□ -1.65
VARS-222ENST00000470953 A0A1W2PQL4 384 aaPredicted RBP4.74□□□□□ -1.65
VARS-222ENST00000470953 DPPA5A6NC42 116 aa4.74□□□□□ -1.65
VARS-222ENST00000470953 BTBD17A6NE02 478 aa4.74□□□□□ -1.65
VARS-222ENST00000470953 ANKRD61A6NGH8 418 aa4.74□□□□□ -1.65
VARS-222ENST00000470953 METTL15A6NJ78 407 aa4.74□□□□□ -1.65
VARS-222ENST00000470953 J3QT63 122 aa4.74□□□□□ -1.65
VARS-222ENST00000470953 SLC1A7O00341 560 aa4.74□□□□□ -1.65
VARS-222ENST00000470953 DVL1O14640 695 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms