RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 ZNF850A8MQ14 1090 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 M0QYG6 137 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 UPK1BO75841 260 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 SERPINA3P01011 423 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 CST4P01036 141 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 NRASP01111 189 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 IL1AP01583 271 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 RAF1P04049 648 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 MAS1P04201 325 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 CD2P06729 351 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 DANCRP0C864 163 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 APOBEC3AP31941 199 aaPredicted RBP4□□□□□ -1.77
SF3B1-208ENST00000470268 S100A5P33763 92 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 SERPINF1P36955 418 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 ALDH3B1P43353 468 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 PPP5CP53041 499 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 UCP3P55916 312 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 KLF3P57682 345 aaPredicted RBP4□□□□□ -1.77
SF3B1-208ENST00000470268 RPS23P62266 143 aaKnown RBP4□□□□□ -1.77
SF3B1-208ENST00000470268 CTAG1AP78358 180 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 PLA2G7Q13093 441 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 PRDX4Q13162 271 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 MAB21L1Q13394 359 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 OXA1LQ15070 435 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 RGS21Q2M5E4 152 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 HSD17B12Q53GQ0 312 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 IDNKQ5T6J7 187 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 GDPGP1Q6ZNW5 385 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 Q6ZRM9 215 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 WDR86Q86TI4 376 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 GLCCI1Q86VQ1 547 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 C1orf174Q8IYL3 243 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 OR8G5Q8NG78 346 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 OR10AD1Q8NGE0 317 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 OR52N4Q8NGI2 321 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 OR5H6Q8NGV6 325 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 TRMT10AQ8TBZ6 339 aaKnown RBP4□□□□□ -1.77
SF3B1-208ENST00000470268 CHPT1Q8WUD6 406 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 PIGTQ969N2 578 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 C10orf35Q96D05 121 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 SNX22Q96L94 193 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 WWC2-AS2Q96NR7 200 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 DHRS9Q9BPW9 319 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 PAPOLGQ9BWT3 736 aaKnown RBP4□□□□□ -1.77
SF3B1-208ENST00000470268 WDR12Q9GZL7 423 aaKnown RBP4□□□□□ -1.77
SF3B1-208ENST00000470268 PLK3Q9H4B4 646 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 PLEKHF2Q9H8W4 249 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 MRPL15Q9P015 296 aaKnown RBP4□□□□□ -1.77
SF3B1-208ENST00000470268 TAAR3PQ9P1P4 343 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 AK6Q9Y3D8 172 aaKnown RBP4□□□□□ -1.77
SF3B1-208ENST00000470268 CRYBG3Q68DQ2 2970 aa4□□□□□ -1.77
SF3B1-208ENST00000470268 HELZ2Q9BYK8 2649 aaKnown RBP3.99□□□□□ -1.77
SF3B1-208ENST00000470268 CSMD1Q96PZ7 3565 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 A0A075B6Q4 140 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 TRAV1-2A0A0B4J238 106 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 FUOMA2VDF0 154 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 F5H5P2 479 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 HS3ST1O14792 307 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 SULT1B1O43704 296 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 TIMM8AO60220 97 aaPredicted RBP3.99□□□□□ -1.77
SF3B1-208ENST00000470268 ARL6IP5O75915 188 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 EIF4EP06730 217 aaKnown RBP3.99□□□□□ -1.77
SF3B1-208ENST00000470268 OCMP0CE72 109 aaPredicted RBP3.99□□□□□ -1.77
SF3B1-208ENST00000470268 CD37P11049 281 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 PRF1P14222 555 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 COX6B1P14854 86 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 ZNF12P17014 697 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 ATF1P18846 271 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 ELK1P19419 428 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 S100A1P23297 94 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 MAPK3P27361 379 aaPredicted RBP3.99□□□□□ -1.77
SF3B1-208ENST00000470268 BCAP31P51572 246 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 CLDN12P56749 244 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 KRTAP10-9P60411 292 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 HOXA4Q00056 320 aaPredicted RBP3.99□□□□□ -1.77
SF3B1-208ENST00000470268 ICAM4Q14773 271 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 EFNB3Q15768 340 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 SMUG1Q53HV7 270 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 RNASE12Q5GAN4 147 aaKnown RBP3.99□□□□□ -1.77
SF3B1-208ENST00000470268 CLVS2Q5SYC1 327 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 C11orf71Q6IPW1 123 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 METAP1DQ6UB28 335 aaPredicted RBP3.99□□□□□ -1.77
SF3B1-208ENST00000470268 MOB3CQ70IA8 216 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 UTS2BQ765I0 119 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 GDPD3Q7L5L3 318 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 ANGPTL5Q86XS5 388 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 CALHM1Q8IU99 346 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 TGIF2LYQ8IUE0 185 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 IZUMO1Q8IYV9 350 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 MUC15Q8N387 334 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 CCDC54Q8NEL0 328 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 CSNK2A3Q8NEV1 391 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 OR1M1Q8NGA1 313 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 OR5D14Q8NGL3 314 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 S100ZQ8WXG8 99 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 PP6455Q8WZ26 134 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 OR5P3Q8WZ94 311 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 PHYHIPQ92561 330 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 NRGNQ92686 78 aa3.99□□□□□ -1.77
SF3B1-208ENST00000470268 DIRAS2Q96HU8 199 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms