RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 FAM168AQ92567 244 aa6.85□□□□□ -1.31
HDAC6-216ENST00000468949 FAM46BQ96A09 425 aa6.85□□□□□ -1.31
HDAC6-216ENST00000468949 GSX2Q9BZM3 304 aa6.85□□□□□ -1.31
HDAC6-216ENST00000468949 C6orf62Q9GZU0 229 aaPredicted RBP6.85□□□□□ -1.31
HDAC6-216ENST00000468949 LIME1Q9H400 295 aa6.85□□□□□ -1.31
HDAC6-216ENST00000468949 RBFOX1Q9NWB1 397 aaKnown RBP6.85□□□□□ -1.31
HDAC6-216ENST00000468949 RASL12Q9NYN1 266 aa6.85□□□□□ -1.31
HDAC6-216ENST00000468949 ABRACLQ9P1F3 81 aa6.85□□□□□ -1.31
HDAC6-216ENST00000468949 OR14J1Q9UGF5 321 aa6.85□□□□□ -1.31
HDAC6-216ENST00000468949 ETV7Q9Y603 341 aa6.85□□□□□ -1.31
HDAC6-216ENST00000468949 RAI1Q7Z5J4 1906 aaPredicted RBP6.85□□□□□ -1.31
HDAC6-216ENST00000468949 HRNRQ86YZ3 2850 aaPredicted RBP6.85□□□□□ -1.31
HDAC6-216ENST00000468949 RTTNQ86VV8 2226 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 SPG11Q96JI7 2443 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 PPIAL4EA0A075B759 164 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 METTL21EPA6NDL7 271 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 OOEPA6NGQ2 149 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 FAM25AB3EWG3 89 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 FAM25CB3EWG5 89 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 FAM25GB3EWG6 89 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 SRRM5B3KS81 715 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 PPIAL4DF5H284 164 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 TMEM178BH3BS89 294 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 H3BUI4 141 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 SCGNO76038 276 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 LY6HO94772 140 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 IGHV4-39P01824 125 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 HEXAP06865 529 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 PPIAL4FP0DN26 164 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 SNRPBP14678 240 aaKnown RBP6.84□□□□□ -1.31
HDAC6-216ENST00000468949 ZNF44P15621 663 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 MGMTP16455 207 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 CPT2P23786 658 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 GABRR1P24046 479 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 CFPP27918 469 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 S100A5P33763 92 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 CFHR2P36980 270 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 TALDO1P37837 337 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 GABRA2P47869 451 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 FGF12P61328 243 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 BTG1P62324 171 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 IKZF1Q13422 519 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 SPIN3Q5JUX0 258 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 SFRP4Q6FHJ7 346 aaPredicted RBP6.84□□□□□ -1.31
HDAC6-216ENST00000468949 NLRC3Q7RTR2 1065 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 LINC00596Q86U02 117 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 FAM90A1Q86YD7 464 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 SPICQ8N5J4 248 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 ZNF525Q8N782 197 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 OR51T1Q8NGJ9 327 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 MCFD2Q8NI22 146 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 DYNC2LI1Q8TCX1 351 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 NEK7Q8TDX7 302 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 MRPS24Q96EL2 167 aaKnown RBP6.84□□□□□ -1.31
HDAC6-216ENST00000468949 ZNF488Q96MN9 340 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 GFI1Q99684 422 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 GAL3ST1Q99999 423 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 NRIP2Q9BQI9 281 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 SELENOIQ9C0D9 397 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 BANF2Q9H503 90 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 ZNF701Q9NV72 531 aaPredicted RBP6.84□□□□□ -1.31
HDAC6-216ENST00000468949 IL36GQ9NZH8 169 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 NLKQ9UBE8 527 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 COMMD3Q9UBI1 195 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 RAB22AQ9UL26 194 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 PCDHB10Q9UN67 800 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 PPIAL4AQ9Y536 164 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 CACNG2Q9Y698 323 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 CSMD2Q7Z408 3487 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 PLCE1Q9P212 2302 aa6.84□□□□□ -1.31
HDAC6-216ENST00000468949 IGHV3OR15-7A0A075B7D8 119 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 A0A0B4J203 849 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 IGKV1-12A0A0C4DH73 117 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 A0A0G2JK05 382 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 TMEM272A0A1B0GTI8 110 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 A6NHS1 94 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 LYNX1G3V0Z9 82 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 LGALS8O00214 317 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 NDUFS8O00217 210 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 SH2D1BO14796 132 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 WNT9BO14905 357 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 NOS1APO75052 506 aaPredicted RBP6.83□□□□□ -1.32
HDAC6-216ENST00000468949 NDUFS7O75251 213 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 OR7C1O76099 320 aaPredicted RBP6.83□□□□□ -1.32
HDAC6-216ENST00000468949 ZNF205O95201 554 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 KNG1P01042 644 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 IGKV1D-12P01611 117 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 LYNX1P0DP58 116 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 VSIG8P0DPA2 414 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 MUC1P15941 1255 aaPredicted RBP6.83□□□□□ -1.32
HDAC6-216ENST00000468949 RAB6AP20340 208 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 MDH2P40926 338 aaKnown RBP6.83□□□□□ -1.32
HDAC6-216ENST00000468949 RBM11P57052 281 aaKnown RBP6.83□□□□□ -1.32
HDAC6-216ENST00000468949 TMEM33P57088 247 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 MRPS15P82914 257 aaKnown RBP6.83□□□□□ -1.32
HDAC6-216ENST00000468949 SCN1BQ07699 218 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 DYNC1I2Q13409 638 aaKnown RBP6.83□□□□□ -1.32
HDAC6-216ENST00000468949 IL13RA2Q14627 380 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 C2orf76Q3KRA6 126 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 ZNF404Q494X3 552 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms