RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 RPS23P62266 143 aaKnown RBP3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 SORDQ00796 357 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 TNK1Q13470 666 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 MADCAM1Q13477 382 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 P2RY14Q15391 338 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 OR8G1Q15617 311 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 UBE2V2Q15819 145 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 DGUOKQ16854 277 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 CLVS2Q5SYC1 327 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 DDI2Q5TDH0 399 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 GLT8D1Q68CQ7 371 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 DGAT2L7PQ6IED9 249 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 CD200R1LQ6Q8B3 271 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 METAP1DQ6UB28 335 aaPredicted RBP3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 FBXW12Q6X9E4 464 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 SSX8Q7RTT4 187 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 RNF144BQ7Z419 303 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 LRRTM1Q86UE6 522 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 ANGPTL5Q86XS5 388 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 CCDC54Q8NEL0 328 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 CSNK2A3Q8NEV1 391 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 OR2Z1Q8NG97 314 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 OR52N4Q8NGI2 321 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 OR5D18Q8NGL1 313 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 OR8S1Q8NH09 359 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 ZNF671Q8TAW3 534 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 OSR1Q8TAX0 266 aaPredicted RBP3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 NTN5Q8WTR8 489 aaPredicted RBP3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 FAM222BQ8WU58 562 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 PHYHIPQ92561 330 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 GTF3AQ92664 365 aaKnown RBP3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 BORCS8Q96FH0 119 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 RNF170Q96K19 258 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 S100A13Q99584 98 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 MICU1Q9BPX6 476 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 SLC30A2Q9BRI3 323 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 MRPL37Q9BZE1 423 aaKnown RBP3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 C6orf62Q9GZU0 229 aaPredicted RBP3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 RBM38Q9H0Z9 239 aaKnown RBP3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 PLK3Q9H4B4 646 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 UBTD1Q9HAC8 227 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 ELL3Q9HB65 397 aaPredicted RBP3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 NEK6Q9HC98 313 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 CA10Q9NS85 328 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 TREM2Q9NZC2 230 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 COMMD3Q9UBI1 195 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 DAPK2Q9UIK4 370 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 ZNF391Q9UJN7 358 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 PURGQ9UJV8 347 aaKnown RBP3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 FOXJ3Q9UPW0 622 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 RNF115Q9Y4L5 304 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 V9GY05 133 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 POLEQ07864 2286 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 RTTNQ86VV8 2226 aa3.46□□□□□ -1.86
TMEM39A-204ENST00000468545 IGSF10Q6WRI0 2623 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 PRR14LQ5THK1 2151 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 NBASA2RRP1 2371 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 TRAV1-2A0A0B4J238 106 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 IGKV1-9A0A0C4DH69 117 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 LOC390937A0A1W2PQ73 354 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 PLSCR5A0PG75 271 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 A6NLC8 198 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 DEFB108AA8MXU0 73 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 IQCF6A8MYZ5 107 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 FAM25AB3EWG3 89 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 FAM25CB3EWG5 89 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 FAM25GB3EWG6 89 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 SHISA9B4DS77 424 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 F5H5P2 479 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 ZNF701M0R085 212 aaPredicted RBP3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 CTDSP2O14595 271 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 RGS5O15539 181 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 SPRY1O43609 319 aaPredicted RBP3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 SULT1B1O43704 296 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 ANGPTL7O43827 346 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 CLDN1O95832 211 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 CST4P01036 141 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 IL1AP01583 271 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 ERCC1P07992 297 aaPredicted RBP3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 COX6B1P14854 86 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 IGFBP3P17936 291 aaPredicted RBP3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 IGFBP2P18065 325 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 ADRA2CP18825 462 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 GALP22466 123 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 PRKACBP22694 351 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 TUBG1P23258 451 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 AZGP1P25311 298 aaKnown RBP3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 ZNF93P35789 620 aaPredicted RBP3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 RBMXP38159 391 aaKnown RBP3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 PEX19P40855 299 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 OR3A4PP47883 348 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 ZNF81P51508 661 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 PSMD7P51665 324 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 FUT6P51993 359 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 SNU13P55769 128 aaKnown RBP3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 OR8B8Q15620 311 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 ADIPOQQ15848 244 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 RAB11BQ15907 218 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 MOGQ16653 247 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 C2orf76Q3KRA6 126 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms